Sciurus carolinensis (gray squirrel): 124972279
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Entry
124972279 CDS
T08117
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124972279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124972279
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124972279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
124972279
NCBI-ProteinID:
XP_047392507
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Position
X:16351116..16353497
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AA seq
793 aa
AA seq
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MRRSLEQALDRAEDVIENAQQRPPKRKYSSSGEKSLHQKLYDIFVEECQKEPEGTEELRS
NVNLLEKLVERESLPCLVVNLYPENKGYSLMLEDKTGFFSETIQLPYGERELLEYLDAEE
LPPILLDVLEKSELNIFHCGCVIAEIRDYRQCSDMERSTYQSRHILLHPTMQTLACGIES
MTSDDLQWTQEDKLALESELLLATAEPLCLDPSVTVTCTANRLLYNKQEMNTNPMNQCFK
KHSLSSLNLQQELSQHQSPPELRLLTTCKKKREREAGLQHDLRMPAAGYCVDTWRERCCD
LAIPSQVDVEKYAKAKEPVGLDDPQATIWPTPGLDDSGFESEGGSQLWETKLSFMQSLND
PFFSGKTGPCKEARCEIQMYPPLVSPDVHADGFMARSKTDGGAVNVRQELVQSKVKCAGK
VPHGSSGSARPSQPSPGKKSKQPTARWVRPSVPGKAMKPRALPVTLPPSTGQTLSGNSPP
AQQASSLHKFPPRAPAPKPGGLSQKSPMGVSRGNIVLSPATWPPVRTSEGILSTQGPVGP
TGLKVINVVGPVQGAQVLMNGSSSMLGHSTSTCVPASMYPNGLLLPRGQLPNAQPCPTQP
SAQAGVQLILNNTLGPLTVLQLPPGSLILSPLQQHPQPLQPQPQPLPQPPPQLYQLIPQQ
QLQQPTTALPPQAGPQASVQGSSGQQWALMAQQAVVINLAQGSSVLQPQSAMLCQLGSGQ
QTPGQCLPPQRFQLPAAPQGQLQPQPLPQCLQLRLVQYPMSVPTAPTLTVQSHGVGHTAG
QAKDKMKSSTPKF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgatctttagaacaagctttggatcgtgccgaggatgtcattgaaaatgcccaa
cagagaccccctaagagaaaatactcatccagcggggaaaaatctctacatcagaaactt
tatgacatcttcgtagaagaatgtcaaaaggagcccgaggggacggaggaactcaggagc
aatgtcaacttgctggagaagctggtggagagagagtcgttgccatgcttagtggtcaac
ctgtacccagaaaacaagggctattctctgatgctggaggacaaaactgggttcttttca
gagaccatccagctgccttatggggaaagggaactgcttgagtacttggatgcagaagaa
ttaccacctattctgctggatgtcctagagaaatctgagctgaacatttttcattgtggg
tgtgtcatagcagaaatccgtgactacagacagtgcagtgatatggagcggtccacttac
caaagccgacatattctcttgcatcccaccatgcagactttagcgtgtggtatagagtcc
atgacaagtgatgaccttcaatggactcaggaggacaaacttgcccttgagagcgaactg
ctcttagctacagctgagccactgtgtcttgatccctctgtgacagtcacctgcactgcc
aacaggctactgtataacaagcaggagatgaatactaacccaatgaaccagtgcttcaag
aagcattcattgtcctctctgaatctgcagcaggagctatcccaacatcagtctccacct
gagctaagactattgactacttgcaaaaaaaagagagagagagaagcaggtctgcagcat
gacctaaggatgcctgcagccggatattgtgtggacacgtggagagagagatgctgtgac
ttggccataccttcccaagtggatgtggagaaatatgcaaaagcaaaggagcctgttggg
cttgatgacccacaagcaacaatctggccaacacccgggctagatgattctggatttgaa
agtgaaggtggcagtcagttgtgggaaacgaaactgagcttcatgcagtcactcaatgat
ccatttttctctggcaaaacaggaccatgcaaagaagccagatgtgagatccagatgtat
cctcccctcgtctccccagatgtccatgcggatggcttcatggctcggtcaaagactgat
ggaggggcagtgaatgtgcgccaggagttggtccagagcaaagtcaagtgtgcaggcaaa
gtgccacatggctccagtggctcagcccgtcccagtcaaccctctccagggaagaagtca
aagcagcctaccgccagatgggtgcgaccctccgtaccagggaaggcgatgaaacctcga
gctctgcctgtgacacttccccccagcacaggacagaccttgtcaggtaacagtcctcct
gcacagcaggcaagcagcctgcacaaattcccacctcgtgccccagctcctaagccaggt
ggcctttctcagaagtcccctatgggtgtcagcagaggaaatatagtgctttctccggcc
acctggccccctgtcaggacctcagaaggaatcctgtccacccagggtcctgtgggcccc
actggcctaaaggtcatcaatgtggtgggcccagtgcagggagcccaggttttgatgaat
ggttccagctccatgctgggccattccaccagcacctgtgttcctgcgagcatgtatccc
aatggccttctgctccccagaggtcaattgcccaatgcacagccatgtccaacacagcca
tctgctcaggcaggtgtgcagctgattttaaataatactttgggtcctttaactgtcctc
cagcttccacctggttccctcattttgagtcccctgcagcagcatccccagccactgcag
ccacagccccagcccctgccccagcccccacctcagctttaccagctgattccacagcaa
cagcttcagcaacctacaactgctcttcctccacaggcagggccacaggcttctgtgcaa
ggttcaagtggtcaacagtgggccttgatggcccagcaagctgttgtcattaacctcgct
caaggcagcagtgttctgcagccccagtcagctatgttgtgtcagcttggctctggtcag
caaacacctgggcagtgccttcctccacagagattccagctccctgctgccccacaaggg
cagctccagccccagccactgccacagtgtctacagctgagactggtgcagtaccccatg
tctgtgcccacagcacccaccctgacagttcaatcacatggggttggtcacacagcaggc
caggcaaaagataaaatgaagagtagcaccccaaaattctga
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