Sciurus carolinensis (gray squirrel): 124972291
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Entry
124972291 CDS
T08117
Name
(RefSeq) homeobox protein ARX isoform X1
KO
K09452
homeobox protein aristaless-related
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124972291
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124972291
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124972291
NCBI-ProteinID:
XP_047392518
EnsemblRapid:
ENSSCRG00010025327
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Position
X:15677969..15689609
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AA seq
562 aa
AA seq
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MSNQYQEEGCSERPECKSKSPTLLSSYCIDSILGRRSPCKMRLLGAAQSLPAPLASRADQ
EKAVQGSPKGNSAPFEAELHLPPKLRRLYGPGGGRLLQGAAAAAAAAAAAAAAAATATAG
PRGEAPPPPPPTARPGERPDGTGAAVAAAAAAAAAWDTLKISQAPQVSISRSKSYRENGA
PFVPPPPALDELGGPGGVAHPDERLSAAGGPSSAPAAGGGTGAEDDEEELLEDEEDEEEE
EELLEDDDEELLEDDARALLKEPRRCSVAATGAVATAAAAAVATEGGELSPKEELLLHPE
DAEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREE
LAMRLDLTEARVQVWFQNRRAKWRKREKAGAQTHPPGLPFPGPLSATHPLSPYLDASPFP
PHHPALDSAWTAAAAAAAAAFPSLPPPPGSASLPPSGAPLGLSTFLGAAVFRHPAFISPA
FGRLFSTMAPLTSASTAAALLRQPTPAVEGAVASGALADPATAAADRRASSIAALRLKAK
EHAAQLTQLNILPGTSTGKEVC
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcagtaccaggaggagggctgctccgagaggcccgagtgcaaaagtaaatct
ccaactttgctatcctcctactgcatcgacagcatcctgggccggagaagcccgtgcaaa
atgcggctgctgggagccgcgcagagcttgcctgccccgctggccagccgcgctgaccag
gaaaaggccgtgcaaggctcccccaagggcaacagtgccccgttcgaggctgagctgcac
ctgccgcccaagctgcggcgcctctacggccctggcgggggccgcctcctccagggcgcc
gcggcggcggcggcagcggcggcggcggcagcagccgcggcggccacggccaccgcgggt
ccccggggggaggcccctccaccgccgccgccaaccgcacggccaggggagcggccggac
ggcactggggccgcagtggccgcggcggcggcggcggccgccgcctgggacacactcaag
atcagccaggcgccgcaggtgagcatcagccgcagcaagtcgtaccgcgagaatggggcg
cccttcgtgccgccgccgcccgcgctggacgagttgggcggcccggggggcgttgcgcac
cctgatgagcgccttagcgcggccggcggacccagcagtgccccggcggcgggtggcggc
actggcgctgaggacgatgaggaggagctgctggaagatgaggaggatgaggaggaggaa
gaggagctgctggaggatgatgatgaggagctgctggaggacgatgcccgcgcgctgctc
aaggagcccaggcgctgctcagtggccgccaccggtgccgtggccacggctgctgctgcc
gccgtggccacagagggcggggagctgtcgcccaaggaagagctgctactgcacccagag
gacgctgagggcaaggacggcgaggacagcgtttgcctgtctgcgggcagcgactcagag
gaggggctgctgaaacgcaagcagaggcgctaccgcaccacgttcaccagctaccagctg
gaggaactggagcgggccttccagaagacgcactacccggacgtcttcaccagggaggaa
ctggccatgagactggacttgactgaggcccgagtccaggtctggttccaaaaccgtcgc
gctaagtggcgcaagcgggagaaggctggtgcgcagacccatcccccggggttacccttc
ccagggcccctctcggccacccacccgctcagcccctacctggatgccagcccctttccc
ccgcaccaccctgcgcttgactcggcctggacggctgctgccgccgctgccgccgccgcc
ttcccgagcctacctccgcctccgggctcggccagcctgccgcccagcggggcgccgctg
ggcctgagcactttcctgggagccgccgtgttccggcacccggccttcatcagcccagca
tttggcaggctcttttccaccatggccccactgaccagcgcgtcaactgcggccgcgctc
ctgagacagcccacaccggccgtggagggcgcggtggcgtcgggcgcgctggccgacccg
gccactgcagctgcagacagacgcgcctctagcatagcggcgctgaggctcaaggccaag
gagcacgccgcgcagctcacgcagctcaacatcctgccgggcaccagcacgggcaaggag
gtgtgctaa
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