Sciurus carolinensis (gray squirrel): 124972389
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Entry
124972389 CDS
T08117
Name
(RefSeq) TBC1 domain family member 8B
KO
K19951
TBC1 domain family member 8/9
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124972389
Membrane trafficking [BR:
ncar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124972389
Endosome - Golgi transport
Rab GTPases and associated proteins
124972389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
124972389
NCBI-ProteinID:
XP_047392718
LinkDB
All DBs
Position
X:88261909..88331951
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AA seq
1118 aa
AA seq
DB search
MWLKPEEVLLKNALKLWLMERSNDYFVLQRRRGYGEEGGGGLTGLLVGTLDSVLDSTAKV
APFRILHQTPDSQVYLSIACGANREEITKHWDWLEQNIMKTLSVFDSNEDITNFVQGKIR
GLIAEEGKHSFAKEDDPEKFREALLKFEKSFGLPEQEKLVTYYSCSYWKGRVPCQGWLYL
STNFLSFYSFLLGSEIKLIISWDAVSKLEKTSNVILTESIHVCSQGENHYFSMFLHINQT
YLLMEQLANYAIKRLFDKETFDNDPILDDPLQITKRGLENRAHSEQFNAFFRLPKEETLK
EVHECLLWVPFGHFNTHGKMCISENYICFASQDGNLCSVIIPLREVLAIDKTDDSSKSVI
ISIKGKTAFRFSEVKDFEQLVAKLRLKSGAASTQYISTEGTIGSDCTGPSDNFEMQSSTC
TKECSKTVNTEALMTVFHPQNLETLNSKMLKEKMKEQSWNILFSECGRGVSMFRTKKTRD
LVVRGIPEALRGELWMLFSGAVNDMATNPGYYAEVVEQSLGTCNLATEEIERDLRRSLPE
HPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVAVCERM
LPDYFNRRIIGALVDQAVFEELIRDHLPQLTEHMTDMTFFSSVSLSWFLTLFISVLPIES
AVNVVDCFFYDGIKAILQLGLAILDYNLDKLLACKDDAEAVTALNRFFDNVTNKDSPLPS
SVQQGSNVSDEKSSHIRVDITDLIRESNEKYGSIRYEDIHSMRCRNRLYVIQTLEETTKQ
NVLRVVSQEVKLKLHELDELYVIFKKELFLSCYWCLSCPGLKHHDPSLSYLEQYQIDCQQ
FRVLYHLLSPWAHSANRDSLALWTFRLLDENSDCLINFKEFSSVIDIMYNGSFTEKLKLL
FKLHIPPAYTEVKSKDSSKGDELSMEELLYFSQLHVSKPTNEKEAESGKDSPEKGKGKID
IQAYLSQWQDELLKKEENIKDLPRMNQSQFIQFSKTLYNLFHEDPEEELLYQAIAVVTSL
LLRMEEVGRKLHSPTSSAKGFSGTVYASGGPTKGETESHVEKEPSSLREEPQWSFAFEQI
LASLLNEPALVRFFEKPIDFRAKLENAKISQLRSRTKM
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtggctaaagcctgaggaagtgctcctgaaaaatgcgctgaagctgtggctgatggaa
aggtccaacgactacttcgtgctgcaacggcgtcgaggctacggggaggaaggcggaggg
ggtctcacaggacttctggttgggactcttgattcagtcttggactctactgctaaagta
gctccatttcgcatcttacaccagacaccagattctcaagtttacttgtcaattgcatgt
ggagccaacagagaagaaataaccaagcattgggattggttggaacaaaatatcatgaag
accttatctgtgtttgattcaaatgaagatattactaattttgtacaaggaaagatacga
ggattaattgctgaagagggaaaacattcttttgcaaaagaagatgatcctgagaaattt
cgagaagcccttttgaaatttgaaaaatcttttggtttaccagagcaggagaaattagtg
acctattattcatgcagttattggaaaggacgggttccttgtcagggctggctctatctt
agtaccaattttctgagcttctattcttttttgttgggatccgaaataaaactcattatc
tcctgggatgcagtctcaaaacttgaaaagacttcaaatgtcatactgacagagagtatt
catgtgtgttctcaaggggagaatcactacttttcaatgtttttgcacattaaccaaacc
tatcttcttatggaacaactggcaaactatgccataaagagactttttgataaggaaaca
tttgataatgacccaatccttgatgatcctctacaaattaccaaaagaggtttggaaaac
cgagcccacagtgagcaatttaatgccttttttaggctgcccaaagaggaaactttgaaa
gaagtacatgaatgtttgttatgggtaccatttggccacttcaatactcatggaaaaatg
tgtatctcagaaaactatatctgctttgctagccaggatggcaatctatgtagtgtaatc
attcctttacgagaggtcttagcaatagataagacagacgattccagcaaatctgtcatc
attagcatcaaaggaaaaacagcatttcggttcagtgaagttaaagactttgagcaactg
gtggcaaaactcaggctcaagtctggggcagcttcaactcagtatattagcacagagggt
actattggatctgactgtacaggaccatcagataattttgagatgcaatcttcaacatgt
acaaaagaatgcagtaaaactgtgaacactgaagccttaatgacagtatttcaccctcaa
aatttggagactcttaattctaaaatgttgaaagaaaagatgaaggaacagtcatggaac
atcctattttcagaatgtgggcgtggtgttagcatgtttcgaaccaaaaagactcgagat
ctggttgtaagaggaattccagaggccttaagaggagaactctggatgcttttctcaggt
gctgttaatgacatggctactaatcctggctattatgctgaagtggttgaacagtcttta
gggacctgcaatttggctactgaagaaattgaacgtgacttgcgtcgttccctgcctgag
cacccagcgtttcagagtgacactggcatatctgctctgaggcgggtacttactgcttat
gcatatcggaatcccaaaataggatactgccaggcaatgaacattttaacctcagtgttg
cttctgtatgcaaaagaagaagaagctttttggcttctggttgctgtatgtgaacgaatg
ttgcctgattattttaatcgtcgaatcattggtgccttggtggatcaggcagtctttgaa
gaacttatcagggatcatcttcctcaactcacagaacacatgactgatatgacattcttt
tcctcagtttctctctcatggttcctcacactttttattagtgtgctgcctattgaaagt
gcagtgaatgtggtggactgtttcttctatgatggaataaaggccattttacaattggga
ttggcaatacttgactataatttagacaagctgctggcatgtaaagatgatgctgaagct
gtgacggctttaaacaggttctttgacaatgtcactaataaggatagccctttgccttca
agtgttcagcagggttcaaatgtgagtgatgaaaaaagcagtcatattagagtggatatt
acagatttgataagagagtccaatgagaaatacggtagtattcgctatgaagatatacat
agcatgcgctgtcgcaataggttatatgtgattcagacccttgaggaaacaacaaagcag
aatgtgttgcgtgttgtatcacaagaagtaaaattgaaacttcatgaattggatgaactt
tatgtcatctttaagaaggagctgtttttatcttgttactggtgtttgagttgtccagga
ttgaagcaccatgaccccagcctgtcatatttggaacagtatcagattgactgccagcag
ttcagagtgttataccacttgttgagtccctgggctcattctgcaaatagagattcacta
gctttgtggacgttccgattgttggatgaaaactctgattgccttataaacttcaaagaa
ttctcctctgtaattgacataatgtacaatggaagttttactgagaagcttaaactactt
tttaagctgcatattcctccagcatataccgaagtgaaatctaaggattcttcaaaaggt
gatgaactttccatggaagaattactttatttcagtcagcttcatgtgtccaagcctaca
aatgagaaggaagcagaatcaggaaaagatagccctgaaaaaggcaaaggaaaaattgat
attcaagcatacctaagtcagtggcaagatgagcttcttaaaaaagaagaaaacattaag
gatttaccaagaatgaatcagtcacaatttattcaattttcaaagaccctctataattta
tttcatgaagaccctgaagaagagttattatatcaggccattgctgttgtaaccagtctt
ttgctcaggatggaggaagttggaaggaagctacatagccctacatcatcagccaaagga
ttctctggtacagtctatgcttctggaggacccactaagggagaaacagagagccatgtg
gagaaagagccttcctctcttagggaggaacctcagtggtcatttgcatttgaacagatt
cttgcatctctgttgaatgaaccagccttggtgaggttttttgagaaacccatagatttc
agagccaaactagaaaatgcaaaaatctctcagttaaggtctagaaccaaaatgtga
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integrated database retrieval system