Sciurus carolinensis (gray squirrel): 124972392 Help Entry 124972392         CDS       T08117                                  Name (RefSeq) plexin-A3 isoform X1   KO K06820   plexin A Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04360   Axon guidance Brite KEGG Orthology (KO) [BR:ncar00001]  09150 Organismal Systems   09158 Development and regeneration    04360 Axon guidance     124972392 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Plexin_cytopl Plexin_RBD TIG TIG_2 PSI Sema TIG_plexin PSI_PlexinA-B RasGAP Motif Other DBs NCBI-GeneID:  124972392 NCBI-ProteinID:  XP_047392719 LinkDB All DBs Position X:130498193..130514320 Genome browser AA seq 1894 aa AA seqDB search MFLPIWKSPGTVTGPSLAQLLAMPTVCLLLLFFLTVGEGLGSSRPFRAFVVTDTTLTHLA VHRVTGEVFVGAVNRVFKLAPNLTELRAHVTGPVEDNARCYPPPSMRVCAHRLVPVDNVN KLLLIDYAARRLVACGSIWQGICQFLRLDDLFKLGEPHHRKEHYLSGAQEPDSMAGVIVE QGQGPSKLFVGTAVDGKSEYFPTLSSRKLIGDEDSADMFSLVYQDEFVSSQIKIPSDTLS LYPAFDIYYIYGFVSTSFVYFLTLQLDTQQTLLDTAGEKFFTSKIVRMCAGDSEFYSYVE FPIGCSWRGVEYRLVQSAHLAKPGLLLAQALGVPADEDVLFTIFSQGQKNRASPPRQTIL CLFTLSNINAHIRRRIQSCYRGEGTLALPWLLNKELPCINTPMQINGNFCGLVLNQPLGG LNVIEGLPLLADSTDGMASVAAYTYHQHSVVFIGTRSGSLKKVRVDGSQDAHLYETVPVV DGSPILRDLLFSPDYRHIYLLSEKQVSQLPVETCEQYLSCAACLGSGDPHCGWCVLQHRC CREGACPSASAPHGFAEELSRCVQLRVRPNNVSVTSPGVQLTIAMRNVPDLSAGVSCAFE EVTESEAVLLPSGELHCSSPSLQELQALTRGHGATRTVRLQLLSKETGVRFAGTDFVFYN CSVLQSCMSCVGSPYPCHWCKYRHVCTSHPHECSFQEGRVHSPEGCPEILPRGDLLIPVG VMQPLTLRAKNLPQPQSGQKNYECVVRVQGRQQRVPAVRFNSSSVQCQNASYSYDGDEYG DTELDFSVVWDGDFPIDKPPSFRALLYKCWAQRPNCGLCLKADPRFNCGWCISENRCQLR AHCPAPKTNWMHPSQKGTRCTHPRITQIHPLMGPKEGGTRVTIVGENLGLASREVGLRVA GVRCNSIPTEYVSAERIVCEMEESLVPSPQPGPAELCVGDCSADFRTQSEQLYSFVTPTF DRVSPTRGPASGGTRLTISGSSLDAGSRVTVTVRDGECQFVRRDAEAIVCISPVSTLGPS QAPITLAIDRANISSPGVIYTYTQDPTVTRLEPTWSIINGSTAITVSGTHLLTVQEPRVR AKYRGIETTNTCQVINDTAMLCKAPGIFLGQPQPRAQGEHPDEFGFLLDHVQTARSLNRS SFTYYPDPSFEPLGPSGVLDVKPGSHVVLKGKNLIPAAAGSSRLNYTVLIGGQPCALTVS DTQLLCDSPSQTGRQPVMVLVGGLEFWLGTLHITAERALTLPAMVGLAVGGGLLLLAITA VLVAYKRKTQDADRTLKRLQLQMDNLESRVALECKEAFAELQTDINELTNHMDGVQIPFL DYRTYAVRVLFPGIEAHPVLKELDTPPNVEKALRLFGQLLHNRAFVLTFIHTLEAQSSFS MRDRGTVASLTMVALQSRLDYATGLLKQLLADLIEKNLESKNHPKLLLRRTESVAEKMLT NWFTFLLHKFLKECAGEPLFLLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKT LTLHCVCPESEGSTQVPVKVLNCDSITQAKDKLLDTVFKGIPYSQRPKAEDMDLEWRQGR MARIILQDEDVTTKIECDWKRVNSLAHYQVTDGSLVALVPKQVSAYNMANSFTFTRSLSR YESLLRTASSPDSLRSRAPMITPDQETGTKLWHLVKNHDHADHREGDRGSKMVSEIYLTR LLATKGTLQKFVDDLFETVFSTAHRGSALPLAIKYMFDFLDEQADQRQISDPDVRHTWKS NCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLY AKDIPNYKSWVERYYRDIAKMSSISDQDMDAYLVEQSRLHASDFNVLSALSELYFYVTKY RQEILAALDRDASCRKHKLRQKLEQIISLVSSNS NT seq 5685 nt NT seq  +upstreamnt  +downstreamnt atgtttcttcccatctggaagtctcctgggactgttacgggcccgtccctggcgcagctg ctggccatgcccactgtttgcctcctgctgctgttcttcctcactgtgggggagggtctg ggcagcagcaggcccttccgtgcctttgtggtgacagacaccacactcacccacctggct gtgcaccgagtgactggggaggtttttgtgggtgcagtgaaccgggtcttcaagttggcc cccaacctgactgagttgcgggcccacgtcactgggcctgttgaggacaatgctcgctgc tacccaccccccagcatgcgtgtgtgtgcccaccgcctggtgcccgtggacaatgtgaac aagctgctgctcatagactatgcggcccgtcgcctagtggcctgtggcagcatctggcag ggcatctgccagttccttcgcctagatgacctcttcaagctgggtgagcctcaccaccga aaggagcactacctgtcgggggcccaggagcctgactccatggctggtgtcattgtggag cagggccaggggcctagcaagctgttcgtgggcactgctgtggatggcaagtcggagtac ttccccaccttgagctcccgcaagctcattggcgacgaggacagtgctgacatgttcagt ctggtgtaccaggacgaatttgtctcctctcagatcaagatcccctcagacacactgtca ttgtaccctgcctttgacatctactacatatatggctttgttagcacctcctttgtgtac ttcttgacactgcaactagacactcagcagactctgttggacacagcaggcgagaaattc ttcacgtccaaaattgtgcgcatgtgcgcaggggactcagagttctactcatatgtggag ttccccattggctgctcctggcgtggtgtggagtaccgcttggtgcagagtgcccaccta gccaaacctggcttgctgctggcccaggccctgggtgtgccagctgatgaggatgtcctc ttcaccatcttctctcagggccagaagaacagggccagcccacctcggcagaccatcctc tgcctctttaccctcagcaacatcaatgcccacatccgacgccgcatccagtcctgctat cgtggggagggcacactggccctgccctggctgctgaataaggagctgccctgcatcaac acccccatgcagatcaatggaaacttttgtgggttggtgttgaaccaaccattgggcggc ctgaatgtgattgaggggctgcccctactggctgacagcactgatggtatggccagtgtg gctgcctacacctaccaccagcactctgtggtcttcattggcacacgcagcggcagtctg aagaaggtacgggttgatggctcccaggatgcccacctgtatgagacagtccctgtggtg gatggtagccccatactcagagacctgctcttcagccccgactaccggcacatctacctc ctgagtgagaagcaggtgagccagctcccagtggagacttgcgagcagtacctgagctgt gcggcctgcctgggctcaggggacccacactgtggttggtgcgtgctgcagcacaggtgc tgccgtgaaggtgcttgtcccagtgcctcggccccacatggctttgcagaggagctgagc aggtgtgtacagttgcgggtcaggcccaacaacgtgtcagtgacatcacctggggtgcag ctgaccatagccatgcgcaacgtgccagacctcagtgcgggtgtgagctgtgccttcgag gaggtgacagagagtgaggctgtcctgttgccctctggcgagctgcactgctcctcacct tccctccaggagctccaggctcttaccagggggcacggggccacccgcactgtgcggctg cagctgctctccaaggagactggtgtgaggtttgctgggactgattttgtcttctacaac tgcagtgtcctccagtcgtgcatgtcctgtgttggcagcccctatccctgccactggtgt aagtaccgccacgtgtgtaccagccacccccacgagtgctccttccaggagggcagggtc cacagccccgagggctgccctgagatcttgcctcgtggagacctcctgatccctgtgggt gtcatgcagcctcttaccctgcgggctaagaacctgccacagccccagtcgggccagaag aactatgagtgcgtggtccgggtgcaggggcggcagcagcgagtgccagccgtgcgcttc aacagcagcagcgtgcagtgtcagaatgcctcgtactcttacgacggtgatgagtatggt gacactgagctggacttctccgtggtctgggatggagatttccccatcgacaaacctccc agcttccgagccctcctgtacaagtgctgggcccagcggcccaactgcggcctctgcctc aaggctgaccctcgcttcaactgtggctggtgcatctcagagaacaggtgccagctgcgg gcccattgcccggcccccaagaccaactggatgcacccaagccagaagggcacccggtgt acccacccacgcatcacccagatccacccgctcatggggcccaaggagggaggcacccgg gtcaccatcgtgggcgagaatctgggtcttgcctccagagaggtgggcctgcgagtggct ggcgtacgttgcaactccatccccaccgagtacgtcagtgctgagaggatcgtttgtgag atggaggagtcactggtgcccagcccacagccagggcctgctgagctctgtgtaggcgac tgttctgctgacttccgtacacagtctgagcagctctacagttttgtgaccccgacattt gaccgtgtaagtcccactcggggcccagcttcagggggcacacggctcaccatctctggc agctctctggatgctggcagcagggtcacagtgaccgtgagagatggcgagtgccagttt gtgagaagagatgcagaggccatcgtgtgtatctcgcctgtctccaccctgggccccagc caggccccaatcacccttgccattgaccgtgccaacatatccagtcctggagtcatctat acctacactcaggaccccaccgtcactcgtcttgagcctacctggagcattattaatgga agcactgccatcactgtgagtgggactcacctgttgaccgtccaggagcctcgggtccgg gccaagtaccgtggcattgagactaccaatacgtgccaggtgatcaatgacactgccatg ctgtgtaaggcccctggcatcttccttgggcaaccccagccacgagcccaaggcgagcac cctgatgagtttggcttcctgctggaccatgtacagacagcccgctccctcaaccgctcc tccttcacctactaccccgaccccagctttgagccacttgggccctctggcgtcctggat gtcaaacccggctcccacgttgtcctgaagggcaagaacctgattccggcagcagccggc agctcccgcctcaactacacagtgcttatcggaggccagccttgtgcactcactgtctca gacacacaactcctgtgtgactcgcccagccagacaggccggcagcctgtcatggtgctg gtaggtggcctggagttttggctgggtaccctacacatcacagctgagcgggcactgacc ctgccagccatggtggggctggcagtggggggtgggctcctgcttctggccatcactgct gtgctggtcgcctacaagcgcaagactcaggatgcagaccgcacacttaagcggctccag ctgcagatggacaacctggagtcccgtgtggccttggaatgcaaggaagcttttgcagag ctgcagacagacatcaacgagctaacaaaccacatggatggggtgcagatccctttcctg gactatcggacctatgctgtgcgcgtgctcttcccaggcattgaggcccacccagtgctt aaggagttggatacccccccaaatgtcgagaaggctctgcgcctctttgggcagctgctg cacaaccgcgccttcgtgctcaccttcatccacacgctggaggcccagagcagcttttcc atgcgtgaccgtggcactgtggcttcactcaccatggtggccctgcagagccggctcgac tatgccactgggctgctcaagcaactgctggcggacctcatagagaaaaaccttgagagc aagaaccacccaaagctgctgctgcgcaggacagagtcagtggctgagaagatgcttacc aactggttcacatttctgctgcataagtttctgaaggagtgtgctggggagccactcttc ttgctctactgtgccatcaagcagcagatggagaagggtcccatcgatgccataacaggt gaggcacgctactctttgagtgaggacaagctcatccgacagcagattgactacaagaca ctgaccctgcactgtgtgtgcccggagagtgagggtagcacccaggtcccagtgaaggtt ctcaactgtgacagcataacccaggccaaagacaaactgctggacactgtgttcaagggc atcccctactcccagcgcccgaaggctgaggacatggatctggaatggcgtcagggccgc atggcccgcatcatccttcaggatgaggacgttactaccaaaatcgagtgtgactggaag agggtcaactccctggcccactaccaggtgacagatggttccttagtagcactggtaccc aaacaagtgtctgcctataacatggccaactccttcaccttcacccgctccctcagtcgc tatgagagcttgctccgcactgctagcagccctgatagcctccgctcacgggcacccatg atcacacctgaccaggagacgggcaccaaactgtggcacctggtaaagaatcatgaccat gccgaccaccgagagggggaccgtggcagcaagatggtctcggagatctatctaacacgg ttgctggccactaagggcacactgcagaagtttgtggatgacctatttgaaactgtgttc agcacggcccaccggggctcggccctgcccctggccatcaagtacatgtttgacttcctg gatgagcaggctgaccagcgtcagatcagcgatcctgatgtgcgccacacctggaagagt aactgccttcccctgcgcttctgggtgaatgtgatcaagaaccctcagttcgtgttcgac atccacaagaacagcatcacagatgcctgcctgtcagtggtggcccagaccttcatggac tcctgttccacatcagagcaccgcttgggcaaggactcaccttccaacaagctactctat gccaaggacattcccaactacaagagctgggtggagaggtactaccgagacattgcaaag atgtcttccatcagtgaccaagacatggacgcctacctggtggagcagtcccgcctccat gccagtgactttaatgtcctaagtgcactcagcgagctctacttctatgtcaccaagtac cgccaggagattctcgccgccctggacagggatgcctcttgtcggaagcacaagttgcgc cagaagctggaacagatcatcagcctcgtgtccagcaacagctga

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