Sciurus carolinensis (gray squirrel): 124972447
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Entry
124972447 CDS
T08117
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
ncar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124972447
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124972447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124972447
04090 CD molecules [BR:
ncar04090
]
124972447
04091 Lectins [BR:
ncar04091
]
124972447
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
L1 family
124972447
CD molecules [BR:
ncar04090
]
Proteins
124972447
Lectins [BR:
ncar04091
]
I-type lectins (Siglecs)
124972447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_C17orf99
Fndc10
Motif
Other DBs
NCBI-GeneID:
124972447
NCBI-ProteinID:
XP_047392814
LinkDB
All DBs
Position
X:complement(130018321..130044886)
Genome browser
AA seq
1260 aa
AA seq
DB search
MVVALRYVWPLLFCSPCLLIQIPDELMEPPVITEQSSRRLVVFPTDDISLKCEARGKPEV
EFRWTKDGVHFKPKEELGVTVHEAPYSGSFTIAGNNSFAQRFQGVYRCFASNKLGTAMSH
EIQLMAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILHIKQDERVT
MGQNGNLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPT
NSSSHLVALQGQPLVLECIAEGLPPCTMALGSPTPTIKWLRPSSPMPADRISYQNHNKTL
QLLNVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPESHLYGPGETARLDCQAQ
GRPQPEVTWRINGIPVEELVMDQKYRIEQGALILSNVQPSDTMVTQCEARNRHGLLLANA
YIYVVQLPVKILTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPY
ANGTLGIRDLQANDTGHYFCQASNDQNNATIVANLQVKEATQITQGPRSTIEKKGSRVTF
TCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIDDGRLVIHSLDYSDQGNYSCVASTEL
DEVESRAQLLVVGSPGPVPRLELSDRHLLKQSQVHLSWSPAEDHNAPIEKYDIEFEDKEM
APEKWYSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKN
PVDVKGEGNETNNMVITWKPLRWMEWNAPQVQYRVQWRPQGTRGIWQEQTVSDPFLVVSN
TSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQVSPELEGIKILNSSTVLVRWWPVD
LAQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANTTSAILSGLRPYSSYHLEVQA
FNGRGLGPASEMTFSTPEGVPGHPEALNLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHP
LNAGGKDQLSFDLPDPELRTHNLTNLSPGLRYHFQLQATTKEGPGEAIVREGGTMTLSGK
PDFGNISATAGENYSVISWVPKEGQCNFQFHIQFKALREGKAITDLPRQYVSYNQSSYTQ
WDLQPDTKYEIHLLKEEVLLRQMAVKTNGTSPVRFSSNNFAMEGWFIGFVCAIILLLLIL
LILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNG
DIKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVALE
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtggcgctgcggtatgtgtggcctctcctcttctgtagcccctgcctgctcatc
cagatccccgacgaattgatggagcctcctgtcatcaccgaacagtcttcacggcgcctt
gttgtcttccccacagatgacatcagcctcaagtgtgaggccagaggcaaacctgaagtg
gagttccgctggacaaaagatggagtccacttcaaacccaaggaagaactgggtgtgact
gtacacgaggcaccctactctggctccttcaccatcgcgggcaacaacagctttgcccag
agattccagggcgtctatcgctgctttgccagcaataagcttggcactgctatgtcccat
gagatccagctcatggctgagggtgcccccaagtggccaaaggaaacagtgaagcctgtg
gaggtggaggaaggggagtcagtggttctgccctgcaaccccccacccagtgcagcgcca
ctgcggatctactggatgaacagcaaaatcttgcacatcaaacaggatgagcgagtgacc
atgggccagaatggcaacctgtactttgccaacgtactcacctcagacaaccactctgac
tacatctgcaacgcccacttcccgggtacccgaaccatcatccaaaaggagcccattgac
ctccgggtcaaggccaccaacagcatgattgacaggaagccacgtctcctcttccccacc
aactccagcagccacctggtagccttgcagggacagcccttggtcctggagtgcattgct
gagggcttgcctccctgcactatggccctgggcagccccacacccaccatcaagtggcta
cgccctagtagccccatgccagcagaccgcatcagctaccagaaccacaacaagaccctg
cagctgctgaatgtgggcgaggaagatgacggcgagtatcgctgcttggctgaaaattcg
ctgggcagtgcccggcatgcctactacgtcaccgtggaggctgctccgtattggctgcac
aagcccgagagccatctgtatgggccaggtgagaccgcccgcctggactgccaagcccag
ggcaggcctcagccagaggtcacctggagaatcaatggaatccccgtggaagaattggtc
atggaccagaagtaccggatcgagcagggcgccctgatcctgagcaatgtgcagcccagt
gacacaatggtgacccagtgtgaggcccgcaaccggcatggactcctcctggccaatgcc
tacatctatgttgtccagctgccagtcaagatcctaacaggagacaatcagacgtacatg
gcagtggagggcagcactgcctacctgctgtgcaaggccttcggagcccccgtgcccagt
gtccagtggctggacgaggaaggcacaactgtgcttcaggatgaacgcttcttcccctac
gccaacgggaccctgggcattcgagacctccaggccaatgacactggacactacttctgc
caggcttccaatgaccaaaacaatgcgaccattgtggctaacctgcaggttaaagaagca
acccaaatcacgcaaggaccccggagcacaattgagaagaaaggctcaagggtgacattc
acgtgccaggcctccttcgacccctccttgcagcccagcatcacctggagaggggatgga
cgagacctccaggaactcggagacagtgacaagtacttcatcgatgatgggcgcctggtc
atccacagcctggactacagtgaccagggcaactacagctgtgtggccagcacggagctg
gatgaggtggagagcagggcacagctgttggtggtggggagccctgggccagtgcctcgt
ctggagctgtctgatcgtcacctgctgaagcagagccaggtgcacctatcttggagcccc
gcagaagaccacaatgcccccattgagaagtatgacattgaatttgaggacaaggaaatg
gcacctgagaaatggtacagtctgggcaaggtgccagggaaccagacctccaccaccctc
aagctgtcaccctatgtccactacaccttcagggttactgccatcaacaaatatggccct
ggagaacccagcccagcttctgagactgtggtcacacctgaggcagccccagagaagaac
cctgtggatgtgaaaggagaaggaaacgagaccaacaatatggtcatcacgtggaagccg
ctccgatggatggagtggaacgccccccaggtccagtaccgtgtgcagtggcgcccacag
ggcacgcgggggatctggcaggagcagaccgtgagcgaccccttcttggtggtgtccaac
acatccacctttgtgccctatgagatcaaagtccaggccgtcaacagccagggcaagggc
cctgagccccaggtcaccattggctattcgggggaggactacccccaggtaagccctgag
ctagaaggcatcaagatcctcaactcaagcactgtgctggtcagatggtggcctgtggac
ttggcccaggtcaagggtcatctccggggatacaatgtgacatactggtgggagggcagc
cagaggaagcacagcaagaggcatgtccacaaaggccacgtggtggtgcctgctaacacc
accagtgccatcctcagtggcctgcggccctacagttcgtaccatctagaggtgcaggcc
tttaatgggaggggattgggacctgccagtgagatgaccttcagcaccccagaaggagta
cctggccaccccgaggcattgaacctggagtgccagtcagacaccagcctgctgctgcac
tggcagcccccgctcagccacaatggcgtgctcaccggctacgtgctctcgtaccacccc
ctgaatgcaggaggtaaggaccagctgtccttcgaccttccggatcctgagcttcggaca
cacaacctgaccaacctcagccctggcctgcggtaccacttccagcttcaggccaccaca
aaggagggccctggcgaggccattgtacgggaaggaggcaccatgaccttgtctgggaaa
ccagatttcggcaacatctcggccacagcaggtgaaaactacagcgtcatctcctgggtt
cccaaagaaggccagtgcaacttccaattccacatccagttcaaagcgctgagagaaggc
aaggctatcactgacctcccgcggcagtacgtcagctacaaccagagctcctacactcag
tgggacttgcagcctgacaccaagtacgagatccacctgctgaaggaggaggtgctcctg
cgccagatggctgtgaagaccaacggcaccagccccgtgagattctcctccaacaacttt
gccatggagggctggttcatcggcttcgtctgtgccatcatcctgctgctcctcattttg
ctcatcctgtgcttcatcaagcgcagcaagggcggcaagtactcagtcaaggacaaggag
gacacccaggtggactctgaggcccggccgatgaaagatgagacctttggcgagtacagg
tccctggagagtgacaacgaggagaaggcatttggcagcagccagccctctctcaatggc
gacatcaagcccctgggcagtgacgacagcctggctgattacgggggcagtgtggatgtg
cagttcaacgaggatggctccttcattggccagtacagtggcaagaaggagaaggaggcg
gcaggaggcaacgacagctcgggggccacctcccccatcaaccctgctgtggccctggaa
tag
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integrated database retrieval system
