Sciurus carolinensis (gray squirrel): 124972480
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Entry
124972480 CDS
T08117
Name
(RefSeq) transcription factor SOX-3 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124972480
Transcription factors [BR:
ncar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124972480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
124972480
NCBI-ProteinID:
XP_047392865
EnsemblRapid:
ENSSCRG00010022103
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All DBs
Position
X:complement(118520267..118522002)
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AA seq
323 aa
AA seq
DB search
MYSLLETELKNPNSANAAGGANAGGGSSSGASGGGGGSDQDRVKRPMNAFMVWSRGQRRK
MALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKT
LLKKDKYSLPGGLLPPGAAAAAAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQE
QLGYAQPPSMSSPPPPPALPQMHRYDMAGLQYSPMMPPSAQSYMNAAQPATAAAAAAAAA
AMSLGPMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGRL
HGVHQHYQGAGTAVNGTVPLTHI
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcctgctggagactgagctcaagaacccgaatagcgcgaacgcagccggcggc
gcgaacgcaggcggcggcagcagcagtggcgcaagcggcggtggcgggggcagcgaccag
gaccgcgtgaagcggcccatgaacgccttcatggtatggtcccgcgggcagcggcgcaag
atggccctggagaaccccaagatgcacaactctgagatcagcaaacggctgggcgccgac
tggaaactgctgaccgacgccgagaagcgaccgttcatcgacgaggccaagcgactgcgc
gccgtgcacatgaaggagtacccggactacaagtaccggccacgccgcaagaccaagacg
ctgctcaagaaggacaagtactccctgcccggcggcctgctgccccccggcgccgccgcc
gcagccgccgccgcagccgccgcagccgccgccagcagccctgtgggcgtgggccagcgc
ctggacacgtacacacacgtgaacggctgggccaacggcgcgtactcgctggtgcaggag
cagctgggctacgcgcagcccccgagtatgagcagcccgccgccgccgccagcgctgccg
cagatgcaccgctacgacatggccggcctgcagtacagccccatgatgccacccagcgcc
cagagctacatgaacgccgcgcagcccgccaccgccgccgcggccgcggccgccgcggcc
gccatgagcctgggccccatgggctcggtggtgaagtcggagcccagctcgccgccgccc
gccatcgcgtcgcactcacagcgcgcgtgcctcggtgacctgcgcgacatgatcagcatg
tacctgccacccggcggggacgcggccgacgccgcttctccgctgcccggcggccgcctg
cacggcgtacaccagcattaccagggcgccgggactgcggtcaacggaacggtgccgctg
acccacatctga
DBGET
integrated database retrieval system
