Sciurus carolinensis (gray squirrel): 124972533
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Entry
124972533 CDS
T08117
Name
(RefSeq) stAR-related lipid transfer protein 8 isoform X1
KO
K20632
deleted in liver cancer protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124972533
Membrane trafficking [BR:
ncar04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124972533
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
PIN-TPR-GreABC
SAM_1
Ig_TPPC8_C
Motif
Other DBs
NCBI-GeneID:
124972533
NCBI-ProteinID:
XP_047392929
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Position
X:52072879..52147838
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AA seq
1108 aa
AA seq
DB search
MAGAQGWEPALRLPKPRTWTLWGVKGTRCDPPRWNPETEAKKACEWLRATGFPQYAQLFE
EGSFPLDIGCVKKDHSFLDEDSLGALCRRLMTLNNCASMKLEVHFQCKQNEDSEEEEQCT
ISTHWAFQPESKRWSRVGSSDLLAPPSPSLPVTSSCESVLTELSATSLPAFTVSLPPEPV
HLPLLGRVPSPNDPPLLSPTQGQKIPQEKSKKHRSRSFLKHLESLRRKEKGDSQQTGPER
SRATSERAPKASSFRSCRGFLSAGFYRAKNWASTSASGSDGGTRRAWEAWPVATFRHPEQ
VHRGDYLVHVPGDHKPGTFPRSLSIESLCPEDGHRLADWQPARRWGYEGRRGSCGSTGSH
ASTYDNMPELYPAEPILAGAEAEDEEEGGGSYAHLDDILQHVWGLQQRVQLWSQAMYPDL
EPRDKEEEEEEEEEEETTSSVEVATAEVKEQAEAVAQAETPALGESLSWIQAKVQPVVPA
QAPDEVEPLAQVEAEAPAWAQDNEQEVNSGGEPTSASSLSVEGHSISDTGASSSELDSSG
NSTNETKAAGSLVGLQASVPRERRDSGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEIN
RQFAGQINLLHKGSLLRLTAFMEKYTVPHKQGWVWSMPKFMKRNKTPDYRGQHVFGVPPL
IHVQRTGQPLPQSIQQAMRYLRSQCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQ
SAYDVADLLKQYFRDLPEPIFTSKLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVL
QTLLYFLSDIASAEENQMTAGNLAVCLAPSIFHLNVSKKDSPSPRIKSKRSLVGRPGPRD
LSENMAATQGLSHMISDCKKLFQVPQDMVVQLCGSYSAAELSPPGPALAELRQAQAAGVS
LSLYMEESVQELLRDAAERFKGWMSVPGPQHTDLACRKAPDGHPLRMWKASTEVAAPPAV
VLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRG
GCLLVSQSLDPEQPVPESGVRALMLTSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKV
FGHLCAMEVAKIRDSFPTLQAAGPETKL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcgcagggctgggagccggccttgcggctcccaaagccccggacgtggacg
ctgtggggtgtgaagggcacccggtgcgatccgccgcgctggaatccagaaactgaggct
aaaaaagcatgtgaatggctacgagcgacaggattccctcagtatgctcagctttttgaa
gaaggttcgtttcccctggatattggctgtgtgaagaaggaccacagttttctggacgag
gactctctgggggccctgtgcaggaggctgatgaccttgaacaactgtgcctcgatgaaa
ctggaggttcattttcaatgcaagcagaatgaagactcagaagaagaagagcaatgcacc
atcagcacccactgggcctttcagccagaaagcaagcgctggtcacgagtgggttcctct
gacctactggccccaccaagccctagcctgccagtgacctcaagctgtgagagtgtcctc
actgagcttagtgccacctccctgccagccttcactgtgagcctgccgcctgaaccagtg
cacctgcccttgctaggccgtgtccccagccctaatgacccacccctcctcagccccacc
cagggccagaagattccccaggaaaaaagcaagaagcaccgttcccgaagctttctcaag
caccttgagtctctgaggcggaaggaaaagggtgacagccagcaaacagggcctgagcgt
agccgagccacctcagagagggcccccaaagcgtcatctttccgcagttgccgtggcttc
ctctcagctggattttacagggccaagaactgggcatccacctcagccagtggcagtgat
ggtgggactcggagggcctgggaggcgtggcctgtggctacgttccggcatcctgagcag
gtacaccggggtgactacctggtgcatgtgcccggggaccataaaccaggcacattccct
cgctctctgtccattgagagcctgtgtccagaggatggacaccgtctggcagactggcag
ccagctaggcgctggggctatgaaggccgccggggttcctgtggctcaacaggcagccat
gccagcacctatgacaacatgcctgagctgtacccagctgagcctatactggctggggct
gaggctgaagatgaggaggagggtgggggcagctacgcccacctagatgatatcctccag
catgtgtgggggctacagcaacgggtacagctctggtcccaggccatgtacccagacctg
gagcctagagataaggaagaggaagaggaggaggaagaagaagaggagaccacttcatca
gtagaagtagccacagctgaagtcaaagaacaggctgaggctgtggcccaggcagagact
ccagcccttggagagtccctatcctggatccaggccaaagtccagccagtagtgccagct
caggccccagatgaggtggaaccattggcacaggtagaggctgaggccccagcctgggcc
caggacaatgagcaagaggtgaactcaggtggggaacccacctctgcttccagcctgtct
gtagaaggacactccatttctgacactggggcctcttccagtgaacttgacagtagtggg
aactccacaaatgagaccaaggctgcagggtccctggtgggactccaggcatcagtgccc
cgtgaacggcgtgattcaggcgttggggcctcacttaccagaccctgcaggaagctccgc
tggcacagcttccagaattcccaccggcccagcctcaactcggagtcgctggagatcaat
cggcagtttgcaggccagatcaacctcttgcacaagggctcactgctgaggctcaccgcc
ttcatggagaagtacactgtgccccacaagcaaggctgggtctggtcaatgcccaagttc
atgaaaaggaataagactccggactacaggggacagcatgtatttggggtgccacccctt
atccacgtgcagcgcacaggccagcccctgccacaaagcattcagcaagctatgcgctac
ttgcgcagccagtgcctggaccaggtgggcatcttccgcaagtctggggtcaagtccagg
atccagaacctgcgccaaatgaacgagacctcccctgacaatgtctgctacgagggccag
tctgcctatgatgtggctgacctgctgaagcaatatttccgggacctgcctgagcccatc
ttcacgagcaagctcaccaccactttcctgcagatctatcagctcctccccaaggatcag
tggttggcagcagcacaagccgccaccttgctgctccctgatgagaaccgagaagtgcta
cagacattactttacttcctaagtgacattgcctctgctgaggaaaaccagatgacagcc
ggcaacctggcagtgtgcctggcaccctccatcttccatctcaacgtctccaaaaaggat
agcccctcccccaggatcaagagcaaacgcagcttggttggtcggcctggtcccagggac
ctgagtgaaaatatggctgccacccagggcctatcacacatgatcagtgactgcaagaaa
cttttccaagtgccccaggacatggtggtgcaactgtgtggctcgtacagcgcagccgag
ctcagccctcctggcccagccctggctgagctacggcaggctcaggcagcaggggtgagc
ctgagcctctacatggaggaaagcgtccaggagctgctgcgggatgctgctgagcgcttc
aagggctggatgagtgtgccaggaccccagcacacagatctggcttgcaggaaggcacca
gacgggcaccccttgcgtatgtggaaggcatccacagaggtggcagcccctccagccgtg
gtgctacatcgtgtcctacgggagcgggccctttgggatgaggacctgctgcgagcccag
gtgctagaagccctgatgccaggggtggagctgtaccactacgtcactgacagcatggca
ccccatccttgccgcgacttcgtggtgctccggatgtggcgctctgacctgcctcgtggg
ggttgcctgcttgtctcccagtccttggatcctgaacaacctgtgccagagtcaggggtg
cgggctctcatgctcacttcccagtacctcatggaaccttgtggcctgggacgctcacgc
ctcactcatatctgccgtgctgacctcaggggccgttctcctgactggtacaacaaagtc
ttcgggcacctctgtgctatggaagtggcaaagatcagggactccttccccacactgcag
gcagctggccctgagacaaagttgtga
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