Sciurus carolinensis (gray squirrel): 124972552
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Entry
124972552 CDS
T08117
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124972552
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124972552
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124972552
Peptidases and inhibitors [BR:
ncar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124972552
Ubiquitin system [BR:
ncar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124972552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
124972552
NCBI-ProteinID:
XP_047392966
EnsemblRapid:
ENSSCRG00010021513
LinkDB
All DBs
Position
X:34029541..34144181
Genome browser
AA seq
2559 aa
AA seq
DB search
MTATTRGSPVGGNDNQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQI
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHIYNGTRPCESVSSSVQLPEDELFARSPDPRSPKGWLVDLLNKFGTLNGFQILHDR
FINGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSSSRFSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLATYMESMRLYARDHEDYDPQTVRLGSRYSHVQEVQ
ERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDI
NKDFFESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLW
RVVIQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDG
DKDSINCARQEAVRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSFVVRFPNQ
GRQVDDLEVWSHTNDTIGSVRRCILNRIKANVAHTKIELFVGGELIDPGDDRKLIGQLNL
KDKSLITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHP
RYISFLWQVADLGSSLNMPPLRDGARVLMKLMPPDSTTIEKLRAICLDHAKLGESSLSPS
LDSLFFGPSASQVLYLTEVVYALLMPAGAPLADDSSDFQFHFLKSGGLPLVLSMLTRNNF
LPNADMETRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPGVEGVNPMTSVNQVTHDQA
VVLQSALQSIPNPSSECMLRNVSVRLAQQISDEASRYMPDICVIRAIQKIIWASGCGALQ
LVFSPNEEITKIYEKTNAGNELDLEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTF
IIDLLLHCHSKTVRQVAQEQFFLMCTRCCMGHRPLLFFITLLFTVLGSTARERAKHSGDY
FTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDDVKRTGETGVEETILEGHLGVTK
ELLAFQTPEKKFHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSP
ATINAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKG
FVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRD
DVFGYPQQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWG
EPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEE
SFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAI
QLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQSES
ETAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEE
MKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQDDELIRYISELAIT
TRPHQIIMPSAIERSVRKQNVQFMHNRMQYSLEYFQFMKKLLTCNGVYLNPPPGQDHLLP
EAEEITMISIQLAARFLFTTGFHTKKIVRGSASDWYDALCILLRHSKNVRFWFAHNVLFN
VSNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDH
LLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLSVPATFMLVSLDEGPG
PPIKYQYAELGKLYSVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDPNLSQPIMPIQQNV
ADILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRP
YLDLLLQILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALF
SNCPVAYQILQGNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGY
FLERSHSARMTLAKACELCPEEEPDDQDAPDEHESPPPEDAPLYPHSPGSQYQQNNHVHG
QPYTGPAAHHMNNPQRTGQRAQENYEGSEEVSPPQTKDQ
NT seq
7680 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccagtcggagggaatgacaaccagggccaggctcct
gatggacagtctcagccccccctccaacagaatcagacttcgtcgcctgattcttccaat
gaaaattccccggcaactcccccagatgaacaaggtcaaggtgatgccccaccacagatt
gaagatgaggaacctgcatttccacatactgacttggcaaagttggatgatatgatcaac
aggcctcgatgggtggttccagttctgccgaaaggggaattagaagtgcttttagaagct
gctattgatcttagtaagaaaggccttgatgttaaaagtgaagcctgtcaacgatttttt
cgagatggactaacaatatcattcactaaaatccttacagatgaagcagtgagtggatgg
aagtttgaaatacatagatgtattattaacaatactcatcgcctggtggagctatgtgtg
gcaaagttgtcccaagactggtttccacttctagaacttcttgccatggccttaaatcct
cattgcaaattccatatctacaatggtacacgtccatgtgaatcagtttcttcaagtgtt
cagttgcctgaagatgaactcttcgctcgttctccagaccctcgatcaccaaaaggttgg
ctagtggatcttctcaacaaatttggcactttaaatgggttccagatattgcatgatcgt
tttattaatggatcagcattaaatgttcaaataattgcagcccttattaaaccatttgga
caatgctatgagtttcttactcttcatacagtgaaaaagtactttcttccaataatagaa
atggttccacaatttttagaaaacttaactgatgaagaactgaaaaaagaagcaaagaac
gaagccaaaaatgatgccctttcaatgattattaagtctttgaagaatttagcttcaagg
gttccaggacaagaagaaactgtaaaaaacttagaaatatttaggttaaaaatgatactt
agattattgcaaatttcttctttcaatggaaagatgaatgcactgaatgaagtcaacaag
gtgatatctagtgtatcatactatacccatcggcatggtaatcctgaggaggaagagtgg
ctcacagctgaacgaatggcggaatggatacagcagaacaatattttatccatagtcttg
cgagatagtcttcatcaaccacagtatgtagagaaactggagaagattctccgttttgtc
atcaaagaaaaagctctgaccttgcaagatcttgataatatttgggcagcacaggcgggg
aagcatgaagccattgtaaagaatgtacatgatctactggcaaaattagcatgggatttt
tctcctgaacaacttgatcatctttttgattgttttaaggccagttggacaaatgctagt
aaaaagcaacgtgaaaagctgcttgagctaattcgtcgtcttgcagaagatgataaagat
ggtgtgatggcacacaaagtgttgaaccttctgtggaatctggcccacagtgatgatgtg
cctgtagatatcatggacctggccctcagtgcccacataaaaatactggattatagttgc
tcccaggaccgtgacacacaaaagatccagtggatagatcgctttatagaagaacttcgc
acaaatgacaaatgggttattcccgcactgaaacaaattagagaaatttgtagtttgttt
ggtgaagcacctcaaaatttgagttcttctcgtttcagtcaaactcagcgaagtccccat
gtattttatcgccatgatttaatcaatcaacttcagcacaatcatgccctagttactttg
gtagctgaaaatcttgcaacttacatggaaagcatgagactatatgctagagaccatgaa
gactatgacccacaaactgtgaggctgggaagtagatatagtcatgttcaagaagtccag
gaacggcttaacttccttagatttttactgaaggatggccaactgtggctatgtgctcct
caggcaaaacaaatatggaaatgcttagctgagaatgcagtttacctttgtgatcgtgaa
gcctgttttaagtggtattccaaattgatgggggatgaaccagacttagatcctgatatt
aataaggacttctttgaaagtaatgtgcttcagcttgatccttccctattaactgaaaat
ggaatgaaatgttttgagcgattcttcaaagctgtgaattgtcgagaaggaaaactagta
gcaaaaaggagagcctatatgatggatgatttggagttgataggattagactatctttgg
agggttgttattcagagtaatgatgatattgccagcagagctatagatcttcttaaagag
atatacaccaaccttggtccaaggctacaggtcaatcaggtggtgatccatgaagacttc
attcagtcttgctttgatcgtttgaaagcctcttatgacacgttgtgtgttttggatggt
gacaaagacagtattaattgtgcaagacaggaagcagttcgaatggttcgagtattaact
gttttaagagaatacataaatgaatgtgacagcgattatcatgaggaaagaacgattcta
cccatgtcaagagctttccgtggtaaacacctctcttttgtagttcgatttccaaaccag
ggcagacaggtagatgacctggaggtatggtctcatacaaatgatacaattggttcagtt
cgacgatgtattctcaatcgcattaaagccaatgtagcccatacaaaaattgaactcttt
gtgggcggtgagctgatagatcctggagatgatagaaagttgattggacaattaaatctt
aaagacaaatcgctaattacagccaaactcacacaaataagttccaatatgccttcaagc
cctgatagttcttctgattcctcaactggatctcctggaaatcacggtaatcattacagt
gatggtcccaatccagaagtggaaagctgtttgcctggagtgataatgtcactgcatcct
agatacatctctttcctttggcaagttgcagacttgggtagcagcctaaatatgccacct
cttagagatggagcaagagtgcttatgaaacttatgccaccagatagcacaacaatagaa
aaattaagagctatttgtttagaccacgccaaacttggagagagcagccttagtccatct
ctcgactcacttttctttggtccttcagcctcacaagtgctatatctaacagaggtagtc
tatgccttgttaatgcctgctggtgcacctctggctgatgattcctctgattttcagttt
cacttcttgaaaagtggtggcctaccccttgtcctgagtatgctgacgagaaataacttc
ctaccaaatgcagatatggaaactcgaaggggtgcctacctcaatgctcttaaaatagcc
aaactgttgctaactgccattggctatggccatgttcgggcagtggcagaagcttgtcag
ccaggtgtagaaggcgtgaatcccatgacatcggtcaaccaggttactcatgatcaagca
gtggtgctacaaagtgcccttcagagcattcctaacccatcatctgagtgcatgcttaga
aatgtatcagttcgtcttgctcagcagatatctgatgaggcgtcaagatacatgcctgat
atatgtgtcattagagctatacaaaaaatcatctgggcatcaggatgtggggcattacag
ctagtgtttagcccaaatgaagaaatcactaaaatttatgagaagaccaatgcaggcaat
gaactggacttggaagatgaacaggtttgctgtgaagcactggaagtgatgacgttatgt
tttgccttgattccaacagccttagatgctctcagtaaagaaaaggcttggcagacattc
attattgacttgctattgcactgtcacagcaaaactgtccgtcaggtggcacaggagcag
ttctttttaatgtgcaccaggtgttgcatgggacacaggcctctacttttcttcattact
ctgctctttaccgttttggggagtacagccagagagagagctaaacattcaggcgactac
ttcactctcttaaggcaccttcttaattatgcttataacagtaatattaatgtacccaat
gctgaagttctactcaataatgaaattgattggcttaaaagaattagggatgatgttaaa
agaacaggtgaaacaggtgttgaagagactatcttggaaggccaccttggagtaacaaaa
gaattactggcctttcaaactcctgagaaaaagtttcatattggttgtgaaaaaggaggt
gctaatctcattaaggaattaattgatgatttcatctttcctgcatccaatgtttacctg
caatatatgagaaatggagaactcccagcagagcaggctatcccagtctgtagttcacca
gctacgattaatgctggttttgagttacttgtggcattagctgttggctgtgtgaggaat
ctcaaacagatagtagattctttaactgaaatgtattatattgggacagcaataactact
tgtgaagcacttactgagtgggaatatctgccacctgttggaccccgcccaccaaaagga
tttgtgggcctaaaaaatgctggtgctacttgttacatgaattctgtgattcagcaactc
tacatgattccttccatcaggaacggtattcttgcaatagaaggcacaggtagtgatgta
gatgatgatatgtctggggatgaaaagcaggacaatgagagcaatgttgatcccagagat
gatgtttttggctatcctcaacaatttgaagacaaaccagcattaagtaaaacagaagat
agaaaagaatacaatattggtgtcctaaggcaccttcaggtcatttttggtcatttagct
gcttctcgactacaatattatgtgcccagaggattttggaaacaattcaggctttggggt
gagcctgttaatctgcgtgaacaacacgatgctttagaattttttaattcattggtggat
agtttagatgaagctttaaaagccttaggacatccagctatgctaagtaaagtcttagga
ggctcttttgctgatcagaagatttgccaaggctgcccacataggtacgaatgtgaagaa
tcttttacgactctgaatgtagacattagaaatcaccaaaatcttcttgattctttggaa
cagtatgtcaaaggagatttattagaaggtgcaaatgcatatcattgtgaaaaatgcaat
aaaaaggttgatactgtaaagcgtttgctaattaaaaaattacctcctgttcttgctatc
caactaaaacgattcgactatgactgggaaagagaatgtgcaatcaagttcaatgattat
ttcgaatttcctcgtgagcttgacatggaaccttacacagttgcaggtgttgctaagctg
gaaggagataatgtaaacccagagagtcagctgatacagcagaatgagcagtctgaaagt
gagactgcaggaagcacaaagtataggcttgtgggtgtgcttgtacacagtggccaagca
agtgggggacattattattcttacatcattcaaaggaatggtggagatggtgagagaaat
cgctggtataaatttgatgatggagatgtaaccgaatgtaaaatggatgacgatgaggaa
atgaaaaatcagtgttttggtggagaatacatgggagaagtgtttgatcacatgatgaag
cgcatgtcatacagacgccagaaaaggtggtggaatgcttatatacttttttatgaacga
atggacacaatagaccaagatgatgagttgataagatacatatcagagcttgctatcaca
acaagaccccatcagataataatgccatcagccattgaaagaagtgtacggaaacagaat
gtacaattcatgcataaccgaatgcagtacagtttggagtattttcagtttatgaaaaaa
ctgcttacatgtaatggtgtttacttaaaccctcctccagggcaagatcacctgttgcct
gaagcagaagaaatcactatgattagtattcaacttgctgctaggttcctctttactaca
ggatttcacacaaagaaaatagtccgtggctctgccagtgattggtatgatgcattgtgt
attctccttcgtcacagcaagaatgtacgtttttggtttgctcataatgtcctttttaat
gtttcaaatcgcttctctgaataccttttggaatgcccaagtgcagaagtgaggggtgca
tttgcaaaacttatagtttttattgcacatttttccttgcaagatgggccatgtccttca
ccttttgcatctcctggaccttctagtcaggcttatgacaacttaagcttgagcgatcac
ttactaagagcagtcctaaatctcttgagaagggaagtttcagagcatggacgtcattta
cagcagtatttcaacttgtttgtaatgtatgccaatttaggtgtggcagagaagacacag
ctgctcaaactaagtgtacctgctacctttatgcttgtgtctttagatgaaggtccaggt
cctccaatcaaatatcagtatgctgaattaggcaaattatactcagtagtgtcacagctg
atccgctgttgcaatgtctcatcaagaatgcagtcttcaataaatggtaatcctcctctt
cctaatccatttggtgatcccaatttatcacaacctataatgccaattcagcagaatgtg
gcagacattttatttgtgagaacaagttatgtgaagaaaataattgaagactgcagtaac
tcagaggaaactgtcaaattgcttcgtttttgctgctgggagaatcctcaattctcatct
actgtcctcagtgaacttctctggcaggttgcatattcctacacctatgaacttcggccc
tatttggatctgcttctgcaaatcttactgattgaggactcctggcagactcacagaatt
cataatgcccttaagggaattccagatgaccgagatggactgtttgacacaatccagcgc
tctaagaatcactatcaaaaaagagcataccaatgtataaaatgtatggtagctctcttt
agcaattgtcccgttgcttatcaaatcctacagggtaatggagatctgaaaagaaagtgg
acctgggcagtggaatggcttggagatgaacttgaaagaagaccatacactggcaatcct
cagtacacttacaacaattggtctcccccagtacaaagcaatgaaacgtccaatggctat
ttcttggagagatcacatagcgctaggatgacacttgcaaaagcttgtgaactctgtcca
gaggaggagccagatgaccaagatgccccagatgagcatgagtcacctccacctgaagat
gctccattatacccccattcacctggatctcagtatcaacagaataaccatgtgcatgga
cagccatatacaggcccagcagcacaccacatgaacaaccctcagagaactggccaacga
gcacaagaaaattatgaaggcagtgaagaagtatccccacctcagaccaaggatcagtga
DBGET
integrated database retrieval system
