Sciurus carolinensis (gray squirrel): 124972559
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Entry
124972559 CDS
T08117
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04110
Cell cycle
ncar04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124972559
04114 Oocyte meiosis
124972559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124972559
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124972559
Meiosis-specific proteins
Cohesin complex and associated proteins
124972559
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
124972559
NCBI-ProteinID:
XP_047392981
LinkDB
All DBs
Position
X:complement(43576049..43631332)
Genome browser
AA seq
1254 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEKFVEISLLRMDLLPFSSSLCFYTFLFLYDHFNRISRGSGDKHMVSLSS
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaactgattgagatcgagaactttaaatcgtacaagggtcgacagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgctaggtgaaaaaaccagcaacctgagagtaaagacc
ctgcgggacctgatccatggagctcctgtgggcaaaccagctgccaaccgggcctttgtc
agcatggtctactctgaggagggtgctgaggatcgcacctttgctcgtgtcattgtagga
ggttcttctgaatacaagatcaacaacaaagtggtgcagctacatgagtacagtgaggaa
ttagagaaattgggcattctcatcaaagctcgtaacttccttgtctttcagggtgctgtg
gaatctattgccatgaagaaccccaaagaaaggacagctctatttgaagagatcagtcgc
tctggggagctggcccaggagtatgataagcgaaagaaggaaatggtgaaggctgaagag
gacacacaatttaattaccatcgcaagaaaaacattgcagctgaacgaaaggaggccaaa
caggagaaagaagaggcggaccgctaccagcgcctgaaagacgaggtggtgcgagctcag
gtacagctgcaactctttaagctttaccacaatgaagtagaaattgagaaactcaacaag
gaactggcctcaaagaacaaagagattgagaaagacaagaagcgaatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggagcagcagcagatc
gagaaggagatcaaggagaaggactcagagctgaatcagaagcgacctcagtacatcaaa
gccaaggagaatacctcccacaaaatcaagaagctggaagcagctaagaagtctctgcag
aatgctcagaagcactataagaagcgtaaaggtgacatggatgaactggagaaggagatg
ctttcggtggagaaggcccggcaggagtttgaagaacgaatggaagaggagagtcagagt
cagggcagagacttgaccctggaggagaatcaggtaaagaaataccaccggctgaaagaa
gaagccagcaagagagcagccactttagcccaggagctggagaagttcaatcgagatcag
aaagctgaccaggaccgtttggatctggaagagcggaagaaagtagagacagaggccaag
atcaagcagaaattacgagagattgaagagaatcagaagcggattgaaaagctggaggaa
tacatcactactagcaagcagtccctagaggagcagaagaagctagagggagaattgact
gaggaggtggagatggccaagcgacgaattgatgagattaataaggagctgaatcaggtg
atggagcaattgggggatgcacgcattgaccgccaggaaagcagccgtcagcagagaaag
gcagagataatggaaagcatcaagcgcctttaccctggctctgtgtatggtcgcctcatt
gacctctgtcagcccacacaaaagaagtaccagattgctgtgaccaaggttttgggcaag
aacatggatgccattattgtagactcagagaagacaggccgggattgtattcaatatatc
aaggagcagcgtggggagcctgagacttttttgcctcttgactacctggaggtgaaacct
acggatgaaaaactccgggagctgaaaggggccaagctagtgattgatgtgattcgctat
gagccacctcacatcaaaaaagccctgcagtatgcttgtggcaatgcccttgtctgtgac
aatgtggaagatgcccgccgcattgcctttggaggccatcagcgccacaagacagtggca
ctggatgggaccctgttccagaagtcaggagtcatctctggtggagccagtgacctgaaa
gccaaggcacggcgctgggatgagaaagcagtagacaaattaaaagagaagaaggagcgg
ttgacagaggagctgaaagagcaaatgaaggcaaagcggaaagaggcagagctgcgtcag
gtgcagtctcaggcccatggattgcagatgcgactcaagtactcacagagtgacctagaa
caaaccaaaacacgacatctggcgctaaatctccaggaaaagtccaagctggagagtgag
ctggccaacttcgggcctcgcattaatgatatcaagaggattatccagagccgagagaga
gaaatgaaggacttgaaagagaagatgaaccaggtagaagatgaggtgtttgaagagttt
tgtcgggagattggtgtgcgcaacatccgggagtttgaggaagagaaggtgaagcgacag
aatgaaattgccaagaagcgtttggagtttgaaaatcagaagactcgcttgggcatccag
ttggattttgaaaagaaccagctgaaggaggaccaggataaagtacacatgtgggaacag
acagtgaaaaaggatgaaaatgagatagaaaaactcaagaaggaggaacaaagacacatg
aagatcatagatgagaccatggcccaactacaagacctgaagaatcagcacctggccaag
aagtcagaagtgaatgacaagaatcatgagatggaagagattcggaagaaactggggggt
gccaacaaggaaatgacccacttacagaaggaggtgacagccattgaaaccaagcttgaa
cagaagcgcagtgatcgccacaacttgctacaggcctgcaagatgcaggacatcaagttg
cctctgtcaaagggcaccatggatgatattagtcaggaagagggtagctcccaaggggag
gagtcagtgagtggttctcagagaacttccagtatctatgcacgagaagccctcattgag
attgactacggtgacctgtgtgaggatctgaaggatgcccaggctgaggaggagatcaag
caagaaatgaacacactgcagcaaaagctgaatgagcagcagagtgtgcttcagcggatt
gctgcccccaacatgaaggccatggaaaagctggaaagtgtacgagacaagttccaggag
acttcagatgaatttgaggcagcccgaaagcgagcaaagaaggccaaacaggcttttgaa
cagattaagaaggagcgctttgaccgtttcaatgcttgttttgaatctgtggctactaac
attgatgagatctacaaggctctgtcccgtaacagcagtgcccaggcattcctgggccct
gagaaccctgaggagccctacttggatggtatcaactataattgtgtggctcctggcaaa
cgcttccggcctatggacaacttgtcaggcggggagaagacagtggcagctctggccctg
ctctttgccatccacagctacaagccagcccccttcttcgtcctggatgagatcgatgct
gccttggataacaccaacattggcaaggtggcaaattatatcaaggagcagtcgacttgc
aacttccaggccattgtcatctctctcaaggaggagttctacaccaaggctgagagcctc
attggagtctatcctgagaaatttgttgaaatctctcttttgcggatggacctgctccca
ttctcttcatcattgtgtttttatacctttttattcctttatgatcattttaacaggatc
tcaagagggagtggagataaacacatggtaagtctgtcatcttga
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