Sciurus carolinensis (gray squirrel): 124972577
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Entry
124972577 CDS
T08117
Name
(RefSeq) transcription initiation factor IIA subunit 1
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03022
Basal transcription factors
ncar05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124972577
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
124972577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124972577
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
124972577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
124972577
NCBI-ProteinID:
XP_047393020
EnsemblRapid:
ENSSCRG00010001571
LinkDB
All DBs
Position
2:complement(178862209..178899021)
Genome browser
AA seq
376 aa
AA seq
DB search
MANSANTNTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFH
SEEQQLLLQVQQQHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIV
PDSKLIQHMNASNMSAAATAATLALPAGVTPVQQILTNSGQLLQVVRAANGAQYIFQPQQ
SVVLQQQVIPQMQPGGVQAPVIQQVLAPLPGGISPQTGVIIQPQQILFTGNKTQVIPTTV
AAPTPAQAQITAAGQQQPQAQPAQQQAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKE
KDGAEDGQVEEEPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNL
NGRDYIFSKAIGDAEW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcggcaaatacaaacaccgtgcctaaattatatagatctgtgattgaagat
gttattaatgatgtgagagacatctttctggatgatggagtggatgaacaagtcctgatg
gaactaaaaactttatgggagaataaactaatgcagtctagggcagtagatggatttcat
tcagaagagcaacagcttttattgcaagttcaacagcaacatcaaccccagcagcagcaa
caccatcaccaccaccaccatcagcaagctcaacctcagcagacagtacctcagcaagca
cagacccagcaggtccttattcctgcatcacagcaagccacagcaccacaagttattgtt
cccgattcaaagcttatacaacatatgaatgcatcaaacatgagtgctgctgctacagct
gctaccttggcactgcctgcaggtgtgactcctgttcaacagatattaacaaattcaggc
cagcttcttcaggtggtcagagcagccaatggtgcccagtatatctttcagcctcagcag
tcagtggttctacaacagcaggttataccgcaaatgcaacctggtggagtacaagctcct
gttatacaacaggttcttgcccctcttcctggagggatttcaccacagactggtgttatc
atccagcctcagcagatcttatttacaggaaataagactcaagttatacctacaacagtg
gcagcacccacaccagcacaagcacagataactgcagctggccagcagcaaccacaggcc
cagcctgctcaacagcaagctccattggtattacaagttgatggaactggggatacgtca
tctgaagaagatgaagacgaggaagaagactatgatgatgatgaagaggaggataaagag
aaagatggagctgaagatgggcaggtggaagaagagcccctcaatagtgaagatgatgtg
agtgatgaggaaggacaggaactctttgacacagaaaatgttgttgtatgccaatatgat
aagatacacagaagtaaaaacaaatggaaatttcatctcaaggatggcattatgaatctt
aatggaagagattatatattttccaaagccattggtgatgcagaatggtga
DBGET
integrated database retrieval system
