KEGG   Sciurus carolinensis (gray squirrel): 124972610
Entry
124972610         CDS       T08117                                 
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4 isoform X1
  KO
K22991  WD repeat-containing protein 45
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124972610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124972610
Membrane trafficking [BR:ncar04131]
 Autophagy
  Other autophagy associated proteins
   Others
    124972610
SSDB
Motif
Pfam: PROPPIN WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WDR55 Beta-prop_RSE1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd BCAS3_WD40 Beta-prop_WDR19_1st CPSF_A Beta-prop_IFT80_2nd Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_IFT140_1st EIF3I Beta-prop_TEP1_2nd
Other DBs
NCBI-GeneID: 124972610
NCBI-ProteinID: XP_047393063
LinkDB
Position
X:complement(40486921..40492416)
AA seq 361 aa
MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS
NLLALVGGGSSPKFSEISAVLIWDDAREGKDSKDKLVLEFTFTKPVLAVRMRHDKIVIVL
RNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLASTKP
GTSSAPFTINAHQSDVACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPAT
LYCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQWSLAS
FTVPAESACICAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDD
F
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgactcagcagcctcttcgaggggtgaccagcctgcgcttcaaccaagaccaaagctgt
ttttgctgtgccatggagacaggcgtgcgcatctacaatgtggaaccactgatggagaag
gggcatttggaccacgagcaggtgggcagcatgggcctggtagagatgctgcaccgttcc
aacctgctggccctggtgggcggtggtagcagccccaagttctcagagatctcagcagtg
ctgatctgggatgatgcccgggagggcaaggactccaaggacaagctggtgctggagttc
accttcaccaagccagtgctggctgtgcgcatgcgccatgacaagattgtgattgtgctg
aggaaccgcatctacgtgtactcctttcctgacaatccccgaaaactatttgagtttgac
acccgagacaaccccaaggggctctgtgacctctgtcccagcctggagaagcaactgctt
gtattcccaggacacaagtgtggaagtctgcaacttgtggacctggcaagcacaaagcct
ggcacctcatctgctcccttcaccatcaatgcacatcagagtgatgtggcctgtgtgtct
ctgaaccagccaggcactgtagtggcctcggcctcccagaagggtacccttattcgcctt
tttgacacccagtccaaggaaaaactggtagagctgcgccgaggcactgaccctgccacc
ctatactgcattaacttcagccacgactcctccttcctctgcgcttccagtgataagggc
actgtccatatctttgctctcaaggatacccgcctcaaccgtcgctccgcgctggctcgt
gtgggcaaggtggggcctatgattggacagtacgtggactctcagtggagcctggcaagc
tttactgtgcctgccgagtcagcatgcatctgcgcctttggtcgcaatacttccaagaat
gtcaactctgtaattgccatctgcgtagatgggaccttccacaaatatgtcttcactcct
gatggaaactgcaacagagaggctttcgacgtgtaccttgacatctgtgatgatgatgat
ttttaa

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