KEGG   Sciurus carolinensis (gray squirrel): 124973819
Entry
124973819         CDS       T08117                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-like
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    124973819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncar04121]
    124973819
   03036 Chromosome and associated proteins [BR:ncar03036]
    124973819
Enzymes [BR:ncar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124973819
Ubiquitin system [BR:ncar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124973819
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     124973819
    Noncanonical PRC1 (PRC1.1)
     124973819
    Noncanonical PRC1 (PRC1.3/1.5)
     124973819
    Noncanonical PRC1 (PRC1.6)
     124973819
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 zf-Nse zf-C3HC4_5 RING_XB3-XBAT31 zf-RING_6 zf-RING_4 zf-rbx1 TRAF3_RING zf-UDP
Other DBs
NCBI-GeneID: 124973819
NCBI-ProteinID: XP_047393494
LinkDB
Position
Unknown
AA seq 336 aa
MSQAGQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKN
TMTTKECFHRFCADCIIRALRSGNKECPTCQKKLVSKRSLRPDPNFDALISKIYPSRDEY
EAHQERVLARINKHNNQQALSHSIKEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCS
NASTHSNQKAGPSNKRTKTSDDSGLELDNNNATVAIDPVMVGASEIELVFRPHPTLMEKD
DSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKEESNQMTLDTASEKQYTIYIATASG
QFTVLNGSFSLKLVSEKYWKVNKPMELNYAPIKEHK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgtctcaagctgggcagacaaatggaactcaaccattaagcaaaacatgggaactcagt
ttatatgaattacaacgaacacctcaggaggcaataacagatggcttggaaattgtggta
tcacctagaagtctacacagtgaattaatgtgcccaatttgtttggatatgttgaagaac
acaatgactacaaaggagtgtttccatcgtttttgtgcagattgtattatcagagccctt
agaagtggcaacaaagaatgtcctacttgtcagaaaaagttagtttccaaaagatcacta
aggccagacccaaactttgatgcacttatcagcaaaatttatccaagtcgtgatgagtat
gaagctcatcaagagagagtattagccaggatcaacaagcacaataatcagcaggcactc
agtcacagcattaaggaaggactgaagatacaggccatgaacagattacagcgaggtaag
aaacaacagattgaaaatggcagtggagcagaagataatggtgacagttcacactgtagt
aatgcatccacacatagcaatcagaaagcaggccctagtaacaaacggaccaaaacgtct
gatgattctgggcttgaacttgataataacaatgcaacagtggcaattgatccagtaatg
gttggtgctagtgaaattgaattagtattcaggcctcatcccacacttatggagaaagat
gacagtgcacagacaagatatataaagacttcaggtaatgccactgttgatcacttatcc
aagtatctggctgtgaggttagctttagaagaacttcgaagcaaggaagaatcaaatcag
atgactcttgatacagccagtgagaagcagtataccatttatatagcaacagcaagtggc
cagttcactgtattaaatggctctttttctttgaaattggtcagtgagaagtactggaaa
gtaaataaacccatggaacttaattatgcgcccatcaaggagcacaaatga

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