Sciurus carolinensis (gray squirrel): 124974421
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Entry
124974421 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124974421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124974421
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124974421
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
124974421
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124974421
Exosomal proteins of colorectal cancer cells
124974421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
Xre-like-HTH
Glyco_transf_8
Motif
Other DBs
NCBI-GeneID:
124974421
NCBI-ProteinID:
XP_047393654
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MDRFVWTSGLLEINKTLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMT
VPLSHIVFIEEQAAGIGKSAKIVAHPTKEPGPFQSSKNSYIKLSFKEHGQIEFYRRLSEE
MTQRRWENIPVSQSIQTNRGPQPGRVKAVGIVGIERKLEEKRKETDKNISEVFEDLSKLM
IKAKEMVELSKSIANKIKEKQGDITEDETIRXKSYLLSMGIVNPVTRETYDSGTQYHMQL
AKQLAGILQVPLELLSPEDLVNACKMLEALKLPLRLQVFDSGVMVIDLQSHKEEEMVASA
LETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctttgtgtggaccagcggcctcctggagatcaacaagaccctggtgatccag
cagcgcggggtgcgaatctacgacggcgaggagaagataaaatttgatgctggaaccctc
cttcttagtacccaccgactgatttggagagatcagaaaaatcatgagtgctgcatgacc
gttcctctgtcccacattgtattcattgaggaacaggcagctggaattgggaaaagtgcc
aaaatagtggctcatccaaccaaagaacctggcccattccagagtagtaaaaactcctac
atcaaactctccttcaaagaacatggccagattgagttttacaggcgtttatcagaggaa
atgacccagagaagatgggagaatataccagtttctcagtcgatacaaacaaatagagga
ccccagccaggaagagtaaaagctgtaggaattgtaggtattgaaaggaaactggaagaa
aaaagaaaagaaactgacaaaaacatttctgaggtctttgaagaccttagcaagctaatg
atcaaggctaaagaaatggtggagttatcaaaatcaattgctaataaaattaaagagaag
cagggtgacatcacagaagatgagaccatcaggnttaagtcctacttgttgagcatggga
atagttaacccagtcaccagggaaacctacgactcaggaacacagtaccacatgcagctg
gctaaacagctggctggaatattgcaggtgcctttagagttgctctcaccagaagattta
gtgaatgcatgcaagatgctggaagcactgaaattacctctcaggctccaggtttttgac
agtggtgtcatggtaattgaccttcagtcccacaaggaagaggaaatggtggcctcggcc
ctggagacagtttcagaaaaaggatccctaacatcagaagagtttgctaagctcgtggga
atgtctgtccttctggccaaagagaggttgctgcttgcagagaagatgggtcatctttgc
cgagatgactcagtagaaggcttgcggttttacccaaatttatttatgacacagagctaa
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