Sciurus carolinensis (gray squirrel): 124974859
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Entry
124974859 CDS
T08117
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124974859
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Other domain-containing proteins
Patched domain-containing proteins
124974859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
124974859
NCBI-ProteinID:
XP_047393779
EnsemblRapid:
ENSSCRG00010023246
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHA
AVTKIQVPRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVRLF
QKYNSKVKMYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTTEGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STGLTKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggctcggccacttc
attgccagtcacccggtcttcttcgcctcggcgccggtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtcgaagaaagcgtggagcacctgctggcgccccaacac
agcctagccaagatcgagcgcaacctcgtcaacagcctcttcccggtcaaccgctccaag
caccggctctactcggacctgcagacccctgggcgctacggccgggtcatcgtcacctcc
ttccagaaagcgaacatgctggaccagcatcacacggacctgatcttaaagttgcatgct
gctgtgaccaagatccaggtaccaagacctggttttaattacacgtttgcccacatatgt
atcctgaataatgataagacttgcatcgtggatgacatagtacacgtcctggaagagtta
aagaatgctcgggctacgaatcggaccaattttgctatcacatacccgatcacccactta
aaggatggtagggccgtatacaatgggcaccagcttgggggtgtcactgtgcacagcaag
gatcgggtgaaatctgcagaggccattcagctcacctactacttgcagtcaatcaacagt
ctcaatgacatggtggctgagaggtgggagtccagtttctgcgacactgtcagactgttc
cagaaatacaacagtaaagtcaaaatgtacccttacacatcctcatcactgagggaagat
ttccagaagaccagccgtgtgtcagaacgttacctggtcaccagcctgatcctggtagtc
actatggccatcctctgctgctctatgcaggactgcgtccgcagcaaaccctggctaggc
ctgcttgggttggtaaccataagcctagccactctcactgcagctgggatcatcaatctt
actggtgggaaatacaattccaccttcctgggagtccctttcgtcatgctaggtcatgga
ctatatgggacttttgaaatgttatcctcctggaggaaaactagagaagaccaacatgtt
aaggagcgaactgcagcagtctatgcagactccatgctctccttttctctcaccactgcc
atgtacctggtcacctttggcataggggccagccctttcacaaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatcttcttcaactacctctatgtactctcgttt
tatggttccagcctggtgttcactggctacatagaaaacaattaccagcatagtatcttc
tgtagaaaagtcccaaagcctgaggtattgcaggagaagccggcatggtacaggtttctc
ctgacagccagattcagtgaagacacaactgaaggagaggaagcgaacacttacgagagt
cacctattggtatgtttcctcaaacgctattactgtgactggataaccaacacctatgtc
aagccttttgtagttctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagcgaagggtcagaccttagtaacattgtagcaactgcgacgcaaaccattgag
tacactactgcccagcaaaagtactttagcaactacagtcctgtgattgggttttacata
tatgagtccatagaatactggaacactagtgtccaagaagacgttctagaatacaccaag
ggatttgtgcggatatcctggtttgaaagctacttaaattaccttcggaaactcaatgta
tccactggcttgactaagaaaaatttcacagacatgttgaggaattccttcctgaaagcc
ccccaattttcacattttcaagaggacatcatcttctctaaaaagtacaatgatgaggtt
gatgtagtggcctccagaatgtttttggtggccaagaccatggaaacaaacagagaagaa
ctctatgatctcttggagaccctgaggagactgtcggtcacctccaaggtaaagttcatc
gtctttaatccatcttttgtgtacatggatcgatatgcctcctctctgggagcccccctg
cacaactcctgcatcagtgctttgttcctgctcttcttctcggcattcctggtggcagat
tctctgattaatgtctggataactctaacagttgtgtctgtggagtttggagtgataggt
tttatgacattatggaaagtagaactggactgcatttctgtgctatgcttaatctatgga
attaactacacaattgacaattgtgctccactgttatccacatttgttctgggcaaggat
ttcacaagaactaaatgggtaaaaaatgccctggaagtacatggggtagctattttacag
agttacctctgctatattgttggtctgattcctcttgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccctctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgggaggaaattgagtgtgtagaaatggtggatatcgatagtacccga
gtggttgaccaaattacaacagtatga
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