Sciurus carolinensis (gray squirrel): 124975927
Help
Entry
124975927 CDS
T08117
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124975927
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124975927
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124975927
Peptidases and inhibitors [BR:
ncar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124975927
Ubiquitin system [BR:
ncar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124975927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
124975927
NCBI-ProteinID:
XP_047394382
LinkDB
All DBs
Position
1:165332455..165472656
Genome browser
AA seq
2640 aa
AA seq
DB search
MESEEEQHMTTLLCMGFSDPATIRKALRLAKNDINEAVALLTNERPGLDYGGYEPMDSGG
GPSPGPAGVPRGDGGGDSGGGPSRGGSTGGGGGFDPPPAYHEVVDAEKNDENGNCSGEGI
EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDENCKRFMDRCMP
EAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPIGLLGVLTMAFNPDNE
YHFKNRMKVSQRNWAEVFGEGNMFAISPVSAFQKEPHGWVVDLVNKFGELGGFAAIQAKL
HSEDIELGAVSALVQPLGVCAEYLNPSVVQPMLDPVILTTIQDVRSVEEKDLKDKRLVSI
PELLSAIKLLCMRFQPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIEDSTLSK
SVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELTKIWKI
QSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGRE
ARFETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAVKEAIKRSYIIKCIED
IKGLENGQVWKKTRRMDSRQQGGLTGDYVSLPGYTETKQRSSQLNNPQFVWVVPALRQLH
EITRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAAAVAGPGGLTGLTLVDG
RYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREMCFEWFTKGQ
HDLESDVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNLCDHRLKRQGAQLYVEKLEL
IGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAA
SSALGGPTLTHAVTRATKMLTATAMPTVATSVQSPYRSTKLVIIERLLLLAERYVITIED
FYSVPRTILPHGASFHGHLLTLNVTYESTKDTFTVEAHSNETIGSVRWKIAKQLCSPVDN
IQIFTNDSLLTVNKDQKLLHQLGFSDEQVLTVKTSGSGTPSGSSADSSTSSSSSSSGVFS
SSYAMEQEKSLPGVVMALVCNVFDMLYQLANLEEPRITLRVRKLLLLIPTDPAIQEALDQ
LDSLGRKKTLLSESSSQSSKSPSLSSKQQHQPSASSILESLFRSFAPGMSTFRVLYNLEV
LSSKLMPTADDDMARSCAKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICL
QLARFLLVGQTMPTLLDEDLTKDGIEALSSRPFRNVSRQTSRQMSLCGTPEKSSYRQLSV
SDRSSIRVEEIIPAARVAIQTMEVSDFTSTVACFMRLSWAAAAGRLDLVGSSQPIKESNS
LFPAGIRNRLSSSGSNCSSGSEGEPVALHAGICVRQQSVSTKDSLIAGEALSLLVTCLQL
RSQQLASFYNLPCVADFIIDILLGSPSAEIRRVACDQLYTLSQTDTSAHPDVQKPNQFLL
GVILTAQLPLWSPTSIMRGVNQRLLSQCMEYFDLRCQLLDDLTTSEMEQLRISPATMLED
EITWLDNFEPNRTAECETSEADNILLAGHLRLIKTLLSLCGAEKEMLGSSLIKPLLDDFL
FRASRIILNSHSPAGSAAISQQDFHPKCSTVNSRLAAYEVLVMLADSSPSNLQIITKELL
SMHHQPDPALTKEFDYLPPVDSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSV
DDDTDNPDDSVFYQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTS
LIDQMDEYLKKMGRDQIFKNTFQGIYSDQKICKDCPHRYEREEAFMALNLGVTSCQSLEI
SLDQFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKY
DEQIRFPWMLNMEPYTVSGMARQDSSSEVGENGRSLDQGGGGSPRKKVALTENYELVGVI
VHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLEYECFGGEYRPKVYDQ
TNPYTDVRRRYWNAYMLFYQRVSDQNSPVLPKKSRVSVVRQEAEDLSLSAPSSPEISPQS
SPRPHRPNNDRLSILTKLVKKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYSSDYFS
FVLSLASLNATKLKHPYYPCMAKVSLQLAIQFLFQTYLRTKKKLRVDTEEWIATIEALLS
KSFDACQWLVEYFISSEGRELIKIFLLECSVREVRVAVATILEKTLDSALFYQDKFKSLH
QLLEVLLALLDKDVPENCKNCAQYFFLFNTFVQKQGIRAGDLLLRHSALRHMISFLLGAN
RQNNQIRRWSSAQAREFGNLHNTIALLVLHSDVSSQRNVAPGIFKQRPPISIAPSSPLLP
LHKEVEALLFLSEGKPYLLEVMFALRELTGSLLALMEMVVYCCFCNEHFSFMMLHFIKNQ
LETAPPHELKNTFQLLHEILVIEDPIQVERVKFVFETENGLLALMHHSNHVDSSRCYQCV
KFLVTLAQKCPAAKEYFKENSHHWSWAVQWLQKKMSEHYWTPQSNVSNETSTGKTFQRTI
SAQDTLAYATALLNEKEQSGSSNGSESSPANENGERHLQQGSESPMMIGELRSDLDDVDP
NT seq
7923 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggaggaggagcagcacatgaccacgcttctgtgcatgggcttttcggacccc
gccaccatccgcaaggccttacgcctggccaagaacgacatcaacgaggccgtggcgctg
ctcaccaacgagcggccgggcctcgactacggcggctacgagcccatggacagcggcggc
ggccccagcccggggcctgccggggtcccgcggggcgacggcggcggggacagcggcggc
ggcccctcccgcggcgggagcaccggaggcgggggcggcttcgaccccccgcccgcctac
cacgaggtcgtggacgcggagaagaatgatgaaaatggaaactgctcaggggaaggaatt
gaattccctacaaccaatttatatgaactggaaagccgtgttttgactgatcattggtcc
atcccgtataagcgagaagaatcactaggcaaatgcctgttggcttctacctacctagca
agacttggtctttctgagtctgatgagaattgtaaaagatttatggataggtgtatgcct
gaagcatttaaaaagctcctgacatcaagtgctgttcacaagtggggtactgaaattcat
gaaggaatctacaacatgttgatgctattaatagaactggttgcagagagaataaaacaa
gatccaattcccattggtctcctgggtgtgcttacaatggctttcaatcctgataatgaa
taccattttaaaaacagaatgaaagtgtcacaaaggaattgggcagaagtgtttggagag
ggaaatatgtttgctatttcacctgtatctgctttccaaaaggaacctcacggatgggtt
gtggatttggtaaataagttcggagaattaggtggatttgcagcaatccaagccaaactc
cattcagaagacatagaacttggggccgtttcagcactggtgcaacccttaggagtgtgt
gcagagtacctgaatccctcagtggtgcagcccatgctagacccagtcatccttaccaca
atacaggatgtgaggagcgtggaggagaaggacctcaaagacaagagattggttagcatc
cctgagctcctatctgccattaagttactttgcatgcgcttccaaccggatcttgtgaca
attgtggatgaccttcggcttgacatcctgctgcgcatgctgaaatcaccacattttagt
gctaaaatgaattccctcaaagaagtaaccaaactgatagaagatagcactttatctaaa
tctgtgaagaatgctatagatacagacagattattagattggctagtagaaaactcggtt
ctgtcaattgcactagaaggcaacatagaccaagcacaatactgtgatcgtataaaggga
attattgaactcttgggcagtaaattgtctttagatgaactcactaaaatttggaagata
cagtcaggacaatcatctaccgtgatcgagaacattcacactattattgctgcagcagct
gtgaaatttaattcagatcagcttaatcatttgtttgttctcattcagaagagctgggag
actgagagtgatagagtaagacagaagcttttgagcctgattggacgaataggccgggaa
gctcgctttgagaccacttctggaaaggtgttagacgtcctctgggaactggctcatctt
ccaaccctgcccagtagcctcattcagcaagctttggaggagcatctgacaatccttagt
gacgcatatgcagtgaaggaagcaatcaagaggagctacatcattaagtgcatagaagat
attaaaggcctggagaatggtcaggtttggaaaaaaacaagaaggatggattcaaggcag
caaggtgggctgactggggattatgtctccctgccaggctacacagaaactaagcaaagg
tcatctcagcttaataatccccagtttgtttgggtggtaccagctttgcgtcagctccat
gaaatcacccgctcattcataaaacaaacctaccaaaagcaagacaagagcattattcaa
gacttgaagaaaaattttgaaatagtgaaattggtaacgggaagtttgatagcttgccat
cgacttgcagcagctgtggctgggcctggaggcctaactggtttgacgctagtggatggc
cgatacacttaccgggagtatttagaggcacatctgaaatttctggcatttttcttgcaa
gaagctaccctgtatttgggttggaatcgtgccaaggaaatctgggagtgtcttgtgact
ggccaggatgtttgtgaattagatagagagatgtgctttgagtggtttacaaaagggcaa
catgatctcgagagtgatgttcagcagcaactcttcaaggagaaaattctgaaactggag
tcatatgaaatcactatgaatggttttaacttgtttaagactttttttgaaaatgtgaat
ctctgtgatcatcgattaaaaagacaaggtgctcagttgtatgtagaaaagctggaattg
ataggaatggatttcatatggaaaatagccatggaatcacctgatgaagaaattgctaat
gaagctattcagttaatcataaactatagttacattaatttaaatcctaggttaaagaag
gattcggtgtctttacataagaaatttattgctgactgctatactagattagaagcagct
agttcagcacttggtggccccactctaacacatgctgtgaccagagcaacaaaaatgctt
acagcaaccgccatgccaactgtagccacatcagttcagtctccgtatagatccactaaa
cttgtaataattgagagattgctgcttctggcagaacgctatgtgatcactattgaggat
ttttactctgttccgcgaactattctacctcatggtgcctcatttcatggacatctttta
actcttaacgttacctacgagtctaccaaagataccttcactgtagaggcccacagtaac
gaaaccatagggagtgtgcggtggaagatagccaagcagttgtgctctcctgtggataat
atacagatatttacaaatgatagtctgctgacagtgaataaagatcaaaagcttctccac
cagctgggcttttctgatgaacaagtccttacagtaaagacctctggcagtgggaccccc
tctgggagctcagcagattcctcaaccagctccagcagcagcagcagtggggtttttagt
tcatcatacgccatggagcaggagaaatccctccctggtgtggtgatggctcttgtatgt
aatgtgttcgacatgctttaccagcttgccaatctagaggagccaaggataactctacga
gttcgaaagcttctgcttttgatacccactgatcctgccattcaggaagctcttgatcaa
cttgattctttgggcagaaagaagacattgttgtctgaatcaagttctcagtcttcaaaa
tctccatccctctcttcaaaacaacagcatcagccaagtgccagttcaatcttagaaagt
ctgtttcggtcttttgctccaggaatgtccaccttcagagtgctttacaacttggaagtt
ctgagctccaaactcatgccaacagctgatgatgacatggcaagaagttgtgctaaatcc
ttctgtgagaatttcctcaaagcaggaggtttgagtttggttgtaaatgtcatgcagaga
gattccattccatcagaagtggactatgagacaaggcagggtgtttattccatctgtcta
caacttgcaagatttttacttgttggacaaacaatgcccacgttattagatgaagacctc
accaaagatggcatagaagctctttcttctcgcccattccgaaatgtcagccgacagaca
agcagacagatgtccttatgtggtaccccagaaaagtcatcctaccgacagttgtcagta
tcagatcgatcctctatcagggttgaggaaatcatccctgctgctcgggttgcaatacaa
actatggaagtaagtgatttcacttctacggtggcttgtttcatgagattgtcatgggct
gctgctgcaggacgacttgacctggttgggagtagccagccaattaaagaaagtaattct
ctgtttcctgctggaattcgaaacagactcagcagttcaggaagcaattgcagttctgga
agtgaaggagaacctgtagccctgcatgcaggaatctgtgtccgacagcaatctgtgtcc
accaaagattcgctgattgctggagaggctctgtctcttcttgttacatgcctgcagctt
cggagccagcagctggcatctttctataacttgccctgtgttgctgattttatcatcgat
attctgcttggatcaccaagtgctgaaatccgccgggttgcctgtgatcaactgtacact
cttagtcagacagacacttcagcccatccagatgtgcagaagccaaatcagttccttcta
ggtgtcattctcacagctcagctgcctctctggtccccaactagcattatgagaggagtc
aatcagagactgttatctcagtgtatggagtattttgatttgaggtgccagttattagat
gatctgacgacttcagagatggagcagttacgaataagcccagctaccatgcttgaagat
gagattacatggctggataactttgaacctaatcgcacagctgaatgtgagaccagtgaa
gcagacaacatcttgttggcaggacacttgcggctcattaagaccctcctttcactctgt
ggggcagaaaaggaaatgcttggttcatcactcattaaaccattgttagatgacttcctt
ttccgagcttctagaattattttaaatagtcattctccagctggcagtgccgccatcagt
caacaggactttcatccaaagtgtagtacagtgaatagccgattggcagcctatgaagtc
cttgtaatgttggctgatagttcaccttcaaatcttcaaattattacaaaagaactactt
tctatgcatcatcaacctgaccctgctctcactaaggagtttgattaccttcccccagtg
gatagcagatccagttcagggtttgtgggtctgaggaatggtggtgctacctgttacatg
aatgcagtcttccagcagctgtacatgcagcccgggctccctgagtcactactttcagtg
gatgatgacacagacaatccagatgacagtgtattttaccaggtgcagtctctctttggg
catttgatggaaagcaagctgcagtattatgtacccgagaacttctggaagattttcaag
atgtggaacaaagaactctatgtgagagaacagcaggatgcatatgaattttttactagt
ctcattgatcagatggatgaatatctcaagaaaatggggagagaccaaatttttaagaat
acatttcagggcatctattctgatcagaagatctgtaaagactgtcctcacagatatgaa
cgtgaggaagctttcatggctctcaatctaggagttacttcatgtcagagtttggaaatt
tctttggaccagtttgttagaggagaagttctagaaggaagtaatgcatactactgtgaa
aagtgtaaagaaaagagaataacagtgaaaaggacctgtattaagtctttacctagtgtc
ttggtcattcacctgatgagatttggatttgactgggagagtggacgctccattaaatat
gatgaacaaataaggtttccttggatgctaaacatggagccttacacagtttcaggaatg
gctcgccaggattcatcttctgaagttggtgaaaatggacgaagtttggatcagggaggt
ggaggatcccctcggaaaaaagttgctctcacagaaaactatgaacttgttggtgtcatt
gtacacagtgggcaggcacatgcaggccactactattccttcattaaggatagacggggg
tgtggaaaaggaaagtggtataaatttaatgacacagttatagaagaatttgacctaaat
gatgagaccctggagtatgaatgctttggaggagaatataggccaaaagtttatgatcaa
acaaatccatatactgatgtacgtcgaagatactggaatgcctatatgctcttctaccaa
agagtatctgatcaaaactccccagtattgccaaagaaaagtcgagtcagcgttgtaaga
caggaggctgaggatctctctctgtcagctccatcttcaccagagatttcacctcagtcg
tcaccacgaccccataggcctaacaatgaccgcctctccattctaaccaagttggtcaag
aaaggcgagaagaaaggactatttgtggagaaaatgcctgctcgaatataccagatggtg
agagatgaaaatctgaagtttatgaagaatagagatgtgtacagtagtgattacttcagt
tttgtgttgtcattagcctcactgaatgctactaaattaaagcatccatattatccttgc
atggcaaaggtgagcttgcagcttgccattcagttccttttccaaacttacctacggaca
aagaaaaaactcagggttgacactgaagaatggattgctactattgaagctttactttca
aaaagttttgatgcttgtcagtggcttgttgaatattttattagttctgaaggacgagaa
ttgataaagattttcttgttggagtgcagcgtgagagaagtacgagttgctgtggccacc
attctggagaaaaccttagacagtgccttgttttatcaggataagtttaaaagccttcat
cagttactggaagtactacttgctcttttggataaggatgttccagaaaattgtaaaaac
tgtgctcagtactttttcctattcaacacttttgtacaaaagcaaggtatcagggctgga
gatcttctcctaaggcactcagcactacgacacatgatcagcttcctccttggggccaat
cggcagaacaaccagatacgccgatggagttcagcacaagcacgagaatttgggaatctt
cacaatacaatagcattgcttgtcttgcattcagatgtttcttcccaaaggaatgttgct
cctggcatatttaaacaacggccacctattagcatcgctccctcaagccccctgctgccc
ctccacaaggaagtagaggccttgctgttcctgtctgaagggaaaccctacctgctggag
gtcatgtttgccctgcgggagctgacaggctccctcctggccctcatggagatggtggtg
tactgctgcttctgtaatgagcacttttccttcatgatgctgcatttcattaagaaccaa
ctagaaactgctccaccccatgagttaaagaatacattccaactgcttcatgagatattg
gtcattgaagatcccatacaggtggagcgagtcaaatttgtgtttgagacagaaaatggg
ttactagctttgatgcaccacagtaatcatgtagacagtagtcgctgctaccagtgtgtc
aaatttcttgtaactcttgctcaaaagtgtcctgctgctaaagaatattttaaggagaat
tcccaccactggagctgggctgtgcagtggctccagaaaaagatgtcggaacattattgg
acaccacagagtaacgtctctaatgaaacatcaactggaaaaaccttccagcgaaccatc
tcagctcaggacacattagcatatgccacagctttgttgaatgaaaaagaacaatcagga
agcagtaatgggtcggagagcagtcctgccaatgagaacggagaaaggcacttacaacag
ggttcagaatctcccatgatgattggcgagttaagaagtgaccttgacgatgttgatcct
tag
DBGET
integrated database retrieval system
