Sciurus carolinensis (gray squirrel): 124975937
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Entry
124975937 CDS
T08117
Name
(RefSeq) 26S proteasome regulatory subunit 7-like
KO
K03061
26S proteasome regulatory subunit T1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03050
Proteasome
ncar05010
Alzheimer disease
ncar05012
Parkinson disease
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
ncar05017
Spinocerebellar ataxia
ncar05020
Prion disease
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124975937
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
124975937
09164 Neurodegenerative disease
05010 Alzheimer disease
124975937
05012 Parkinson disease
124975937
05014 Amyotrophic lateral sclerosis
124975937
05016 Huntington disease
124975937
05017 Spinocerebellar ataxia
124975937
05020 Prion disease
124975937
05022 Pathways of neurodegeneration - multiple diseases
124975937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ncar03051
]
124975937
Proteasome [BR:
ncar03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
124975937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_22
AAA_2
DUF815
AAA_5
AAA_16
nSTAND3
RuvB_N
AAA_14
AAA_33
Prot_ATP_ID_OB_C
AAA_28
Sigma54_activ_2
RNA_helicase
AAA_3
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
124975937
NCBI-ProteinID:
XP_047394403
LinkDB
All DBs
Position
2:complement(102181531..102182902)
Genome browser
AA seq
432 aa
AA seq
DB search
MPDYLGADQRKTKEDEKDDKPIRALDEGDVALLKTYSQSTYSRQIKQVEDDIQQLLKKIN
ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK
FVVDLNDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVNLGIEPKGVLLFGPPGMGKTLCARAVANRTDACFIRVI
GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE
LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS
MSVERDIRFELLAPLCPNSTGAEIRSVCTEAGMFAIRARKKIATEKDFLEAVNKVIKSYA
KFSATPRYMTYN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccggattacctcggtgcagatcagcggaaaaccaaagaggacgagaaagacgacaag
cccatccgagctctggatgagggggatgttgccttgctgaaaacctacagccagagcact
tactctaggcagatcaaacaggttgaggatgacattcaacaacttctcaagaaaattaat
gagctcactggtattaaagaatctgacactggcctggccccaccagcactctgggacttg
gctgcagataagcaaactctccagagtgaacagcctttacaggttgcaaggtgtacaaag
ataattaatgctgattcggaggacccaaaatacattatcaatgtgaagcagtttgccaag
tttgtggtagacctcaacgatcaggtggcacctactgacattgaagaagggatgagagtt
ggtgtggacagaaataagtatcaaatccacattccactgcctcctaagattgacccaaca
gttaccatgatgcaggtggaagaaaaacctgatgtcacttatagtgatgttggtggttgt
aaggagcagattgaaaaattgcgagaagtagttgaaaccccactacttcatccagagagg
tttgttaaccttggcattgaacccaagggtgtgctgctgtttggtcccccaggcatgggc
aagacactctgtgccagggcagttgctaatagaactgatgcttgcttcattcgagttatt
ggatcggaacttgtacagaaatacgtcggtgagggggctcgaatggttcgtgaacttttt
gaaatggccagaacaaaaaaagcctgccttatcttctttgatgaaatcgatgccattgga
ggagctcggtttgatgatggtgctggaggtgacaatgaagtgcagagaacaatgttggaa
ctgatcaatcagctggatggttttgatcctcgaggcaacattaaagtgctgatggccacc
aacagacctgatactctggacccagcgctgatgaggccagggagattggatagaaagatt
gaatttagcttacctgatttagagggtcggactcatatctttaagattcatgctcgttca
atgagtgttgaaagagatatcagatttgaattgttagcacctctgtgtcctaatagcact
ggtgctgagattagaagtgtctgcacagaagctggtatgtttgcaatccgagcacggaaa
aaaattgctactgagaaggatttcttggaagctgtaaataaggtcattaagtcttatgcc
aaatttagtgctactccccgttatatgacatacaactga
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