Sciurus carolinensis (gray squirrel): 124975950
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Entry
124975950 CDS
T08117
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00564
Glycerophospholipid metabolism
ncar05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
124975950
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
124975950
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
124975950
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GFIT
Motif
Pfam:
GDPD
C2_GDE1
CBM_20
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
124975950
NCBI-ProteinID:
XP_047394425
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Position
2:complement(30780755..30838781)
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AA seq
687 aa
AA seq
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MTPSQVTFEIRGNLLPGKDSCVSLGEVFAICGSCDALGNWNPQNAVALLPENETGESMLW
KATIELTRGISVQYRYFRGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQ
FGIHNGVETLDSGWLTCQTEIRLRLHYSEKPPVSITKKKFKKSRFRVKLTLEGPEEDDDD
RVSPTVLHKMSNTLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFD
FFEEDLSEHVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDF
IIIKPLPGYNCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASH
GAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKNFMHTQKYDADPVELFEIPVKELTFDQL
QLLKLAHVTALKSKDRQESVVEEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQR
DGMWDGNLSTYFDMNVFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLT
QGKSDIYPELMDLRSRTTPIAMSFAQFENLLGINAHTEDLLRNPSYIQEAKAKGLVIFCW
GDDTNDPENRRKLKEFGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTV
SRFVPSSLCGDSDIHVDANGIDNVENA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgacaccttctcaagttacctttgaaataaggggaaatcttttaccaggaaaagactct
tgtgtttctttaggtgaagtttttgcaatatgtggaagctgtgatgctttaggaaactgg
aatccacaaaatgctgtggctcttcttccagagaatgagactggtgaaagcatgttatgg
aaagcaaccattgaactcactagaggcatatcagttcaatatcgctacttcagagggtgc
tttttagaaccaaagactatcggtggtccatgtcaagtcatagttcacaagtgggagact
catctacaaccacgatcaataacccctttagaaagtgaaattattattgatgatggacaa
tttggaatccacaatggtgttgaaactctggattctgggtggctgacgtgtcagactgaa
ataagattacgtttgcattattctgaaaaacctccagtctcaataaccaagaaaaaattt
aaaaagtctagatttagggtaaagcttacactagagggtccggaggaagatgatgatgat
agggtatctcccactgttcttcacaaaatgtccaataccttggagatatccttgataagt
gataatgagttcaagtgtaggcattcacagccagagtgtggttatggcttacagcctgat
cgttggacagagtatagcatacaaacaatggaaccagataacctggaactgatctttgat
ttttttgaggaagatctaagtgaacatgtagttcagggtgatgcccttcctggacatgtc
ggcacagcctgtctcttatcatccaccattgcagagagtgggaagagtgctggcattctt
actcttcccatcatgagcagaaattccaggaaaacaataggcaaagtgagagttgacttt
atcattattaagccattaccaggatacaactgtgacatgaaatcttcattttccaagtat
tggaagccaagaataccattggatgttggacatagaggtgcagggaattcaacaacaact
gcccagctggctaaagttcaagaaaatactatagcttctttaagaaatgctgctagtcat
ggtgcagcctttgtagaatttgatgttcacctttcaaaagactttgtgcctgtggtatat
catgatctcacctgttgtttgactatgaagaagaaaaactttatgcatacacagaaatat
gatgctgatccagttgaattatttgaaattccagtaaaggaactaacatttgaccaactc
cagttgttaaagctcgctcacgtgactgcattaaaatctaaagatcgacaagaatctgtg
gttgaggaagaaaattccttttctgaaaatcagccgtttccttctcttaagatggttttg
gagtccttaccagaagatgtagggtttaacatagaaataaaatggatctgccaacaaagg
gatggaatgtgggatggtaacttatctacatattttgacatgaatgtgtttttggatata
attttaaaaactgttttagaaaactctggaaagaggagaatagtgttttcttcatttgat
gcagatatttgtacaatggttcggcagaagcagaacaaatatcccatattatttttgact
caaggaaaatctgatatttaccctgaactcatggatctcagatctcggacaaccccgatt
gcaatgagctttgcacagtttgaaaatcttctggggattaacgcacatactgaagacctg
ctcagaaatccgtcctatatccaagaggcaaaagctaagggactagtcatattctgctgg
ggtgatgataccaatgatcctgaaaacagaaggaaattgaaggaatttggagttaatggt
ctaatttatgataggatatatgattggatgcctgaacagccaaatatattccaagtggag
cagttggaacgcctgaagcaggaattgccagagcttaagagctgtttgtgtcccactgtt
agccgctttgttccctcctctttgtgtggggattctgatatccatgtggatgccaatggc
attgataacgtggagaatgcttag
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