Sciurus carolinensis (gray squirrel): 124975969
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Entry
124975969 CDS
T08117
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124975969
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124975969
Transcription factors [BR:
ncar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
124975969
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
124975969
BRITE hierarchy
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
CCDC84
LAMTOR5
Motif
Other DBs
NCBI-GeneID:
124975969
NCBI-ProteinID:
XP_047394470
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Position
2:103214599..103275244
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AA seq
395 aa
AA seq
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MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggtagatttgggaaagaagcttttagaagcggcacgagcaggtcaagatgat
gaagttcgtattttgatggcaaatggagctccttttactacagactggctgggaacctct
ccacttcatctggcagcacagtatgggcattattccaccacagaggtactactacgagct
ggtgtaagtagggatgccagaaccaaagtggaccgaacaccattacacatggcagcttct
gagggccatgccagcatagtagaggttttgcttaagcatggtgctgacgtcaatgcaaag
gacatgttaaagatgacagctctgcattgggccacagaacacaatcatcaagaggtggtg
gaacttttaatcaaatatggtgctgatgtacacacgcaaagtaaattttgtaaaactgca
tttgatatttcaatagacaatggaaatgaagatttagcagaaatattacagattgctatg
cagaaccaaatcaacacaaacccagagagtcctgacactgtgacgatacatgctgcaaca
ccacagtttatcattggacctggaggggtggtgaacctaacaggtctggtatcttcagaa
aattcatccaaggcaacagatgaaacaggtgtgtctgctgttcagtttggaaactcctct
acatcagtgttagctacgttagctgccttagctgaagcctctgctccattatccaattct
tcagaaactccagtagtggccacagaagaagtggttactgcagaatctgtggatggtgca
attcagcaagtagttagttcagggggtcaacaagtcatcacaatagttacagatggaatt
cagcttggaaatttgcactccattccaaccagtggaataggtcagcccatcattgtgacc
atgccagatggacagcaagtattaacagtaccagcaacagacattgctgaagaaactgtt
ataagtgaagaaccaccagctaagagacaatgtatcgaaataattgaaaaccgggtggaa
tctgcagaaatagaagaaagagaagctcttcagaaacagctggatgaagcaaatcgagaa
gcccaaaaatatcggcagcagcttcttaagaaagaacaggaagcagaggcttacagacag
aaattagaagctatgactcgtcttcagactaataaagaagctgtttag
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