Sciurus carolinensis (gray squirrel): 124975971
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Entry
124975971 CDS
T08117
Name
(RefSeq) major centromere autoantigen B
KO
K11496
centromere protein B
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124975971
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
Centromere proteins
124975971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-B_dimeris
DDE_1
CENP-B_N
HTH_Tnp_Tc5
HTH_24
MarR_2
HTH_23
PilI
HTH_Tnp_IS630
MarR
HTH_5
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
124975971
NCBI-ProteinID:
XP_047394479
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Position
2:complement(29296027..29298956)
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AA seq
610 aa
AA seq
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MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYG
VASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASN
GWLDRFRRRHGVVSCSGVARARGRNSAPRTPAAPASPAAVPSEGSGGSTPGWRAREEQPP
SVAEGYASQDVFSATETSLWYDFLPDQAAGLCGSDGRARQATQRLSVLLCANADGSEKLP
PLVAGKSAKPRAGQGGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLA
AQSLDTSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDRSGLQLG
LMEALHFVAAAWQAVEPSDIATCFREAGFGGGPNATITTSLKSEGEEEEEEEEEEEEEEE
EEEEEGEGEEEEEEEEEEGEEEEEGGEGEELGEEEEVEEEGDVDDSDEEEEEEEESSSEG
LEAEDWAQGVVEAGGSFGGYSTQEEAQCPTLHFLEGGEDSESDSEEEEEDEDEDEEDEDD
EDDDEDSDEVPVPSFGEAMAYFAMVKRYLTSFPIDDRVQSHILHLEHDLVHVTRKNHARQ
AGVRGLGHQS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggccccaagcggcggcagctgacgttccgggagaagtcgcggatcatccaggaggtg
gaggagaacccggacctgcgcaagggcgagatcgctcggcgcttcaacatcccgccgtcc
acgctgagcaccatcctgaagaacaagcgcgccatcctggcgtcggagcgcaagtacggt
gtggcctccacctgccgcaagaccaacaagctgtccccctacgacaagctcgagggattg
ctcatagcgtggttccagcagatccgcgccgctggcctgccggtcaagggcatcatcctc
aaggagaaggctctgcgtatagccgaggagctgggcatggacgatttcaccgcctccaac
ggctggctggaccgcttccgccggcgccatggtgtggtgtcctgcagcggcgtggcccgg
gcccggggacgaaacagtgctccccggaccccagcagcacctgccagcccggctgcggtg
ccctcggaggggagtggtgggagtacgcccggctggcgcgcccgggaggagcaaccgccg
tcggtggccgagggatacgcctcccaggacgtgttcagcgccactgagaccagtctttgg
tacgactttctgcccgaccaggcggcggggctgtgcggaagcgatggaagggcgcgccaa
gccacccagcgcttaagcgtcttgctgtgcgccaacgccgatggcagcgaaaagctgccc
cctttggtggccggcaaatcagctaagcctcgtgcgggacaaggtggcctgccctgcgac
tacaccgccaactctaagggtggtgtcaccacccaggccctggccaagtacttgaaagcc
ctggacacccgaatggctgcagagtctcgccgggtcctgctgctggctggccgcttggct
gcccagtccctggacacctcaggcctgaggcacgtgcagctggccttcttccctccgggc
actgtgcatcccttggagcggggagtggtccaacaggtgaaaggccactaccgccaggct
atgctgctcaaggccatggctgccctagagggccaggatcgctcaggcctgcagctgggc
ctcatggaggccttgcactttgtcgctgcagcgtggcaggcggtggagccttcggacata
gccacctgctttcgggaggctggctttggaggtggccctaatgccaccatcaccacttcc
ctcaagagtgagggagaagaggaggaggaggaggaggaggaagaagaagaagaggaggaa
gaagaagaggaggagggtgaaggggaagaggaggaggaggaggaggaagaagaaggggag
gaggaggaggaaggaggggaaggagaggagttgggggaggaagaggaggtggaggaggag
ggtgatgttgatgacagtgatgaagaagaggaggaagaggaggaaagctcttccgagggc
ttggaggccgaggactgggcccagggagtagtggaggccggaggcagcttcgggggttac
agtacccaggaggaggcccagtgccctaccctccatttcctggaaggtggggaagactct
gagtcagacagtgaggaagaggaggaagatgaggatgaggatgaggaggatgaagacgac
gaagatgatgatgaggatagtgatgaggtgcctgtacccagctttggggaggccatggct
tactttgccatggttaagaggtacctgacctccttccccattgatgaccgtgtgcagagc
cacatcctccacttggaacatgatctggtccatgtgactaggaagaatcacgccaggcag
gcgggagttcggggtcttggacatcaaagctga
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