KEGG   Sciurus carolinensis (gray squirrel): 124975971
Entry
124975971         CDS       T08117                                 
Name
(RefSeq) major centromere autoantigen B
  KO
K11496  centromere protein B
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncar03036]
    124975971
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    Centromere proteins
     124975971
SSDB
Motif
Pfam: CENP-B_dimeris DDE_1 CENP-B_N HTH_Tnp_Tc5 HTH_24 MarR_2 HTH_23 PilI HTH_Tnp_IS630 MarR HTH_5 RNA_polI_A34
Other DBs
NCBI-GeneID: 124975971
NCBI-ProteinID: XP_047394479
LinkDB
Position
2:complement(29296027..29298956)
AA seq 610 aa
MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYG
VASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASN
GWLDRFRRRHGVVSCSGVARARGRNSAPRTPAAPASPAAVPSEGSGGSTPGWRAREEQPP
SVAEGYASQDVFSATETSLWYDFLPDQAAGLCGSDGRARQATQRLSVLLCANADGSEKLP
PLVAGKSAKPRAGQGGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLA
AQSLDTSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDRSGLQLG
LMEALHFVAAAWQAVEPSDIATCFREAGFGGGPNATITTSLKSEGEEEEEEEEEEEEEEE
EEEEEGEGEEEEEEEEEEGEEEEEGGEGEELGEEEEVEEEGDVDDSDEEEEEEEESSSEG
LEAEDWAQGVVEAGGSFGGYSTQEEAQCPTLHFLEGGEDSESDSEEEEEDEDEDEEDEDD
EDDDEDSDEVPVPSFGEAMAYFAMVKRYLTSFPIDDRVQSHILHLEHDLVHVTRKNHARQ
AGVRGLGHQS
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgggccccaagcggcggcagctgacgttccgggagaagtcgcggatcatccaggaggtg
gaggagaacccggacctgcgcaagggcgagatcgctcggcgcttcaacatcccgccgtcc
acgctgagcaccatcctgaagaacaagcgcgccatcctggcgtcggagcgcaagtacggt
gtggcctccacctgccgcaagaccaacaagctgtccccctacgacaagctcgagggattg
ctcatagcgtggttccagcagatccgcgccgctggcctgccggtcaagggcatcatcctc
aaggagaaggctctgcgtatagccgaggagctgggcatggacgatttcaccgcctccaac
ggctggctggaccgcttccgccggcgccatggtgtggtgtcctgcagcggcgtggcccgg
gcccggggacgaaacagtgctccccggaccccagcagcacctgccagcccggctgcggtg
ccctcggaggggagtggtgggagtacgcccggctggcgcgcccgggaggagcaaccgccg
tcggtggccgagggatacgcctcccaggacgtgttcagcgccactgagaccagtctttgg
tacgactttctgcccgaccaggcggcggggctgtgcggaagcgatggaagggcgcgccaa
gccacccagcgcttaagcgtcttgctgtgcgccaacgccgatggcagcgaaaagctgccc
cctttggtggccggcaaatcagctaagcctcgtgcgggacaaggtggcctgccctgcgac
tacaccgccaactctaagggtggtgtcaccacccaggccctggccaagtacttgaaagcc
ctggacacccgaatggctgcagagtctcgccgggtcctgctgctggctggccgcttggct
gcccagtccctggacacctcaggcctgaggcacgtgcagctggccttcttccctccgggc
actgtgcatcccttggagcggggagtggtccaacaggtgaaaggccactaccgccaggct
atgctgctcaaggccatggctgccctagagggccaggatcgctcaggcctgcagctgggc
ctcatggaggccttgcactttgtcgctgcagcgtggcaggcggtggagccttcggacata
gccacctgctttcgggaggctggctttggaggtggccctaatgccaccatcaccacttcc
ctcaagagtgagggagaagaggaggaggaggaggaggaggaagaagaagaagaggaggaa
gaagaagaggaggagggtgaaggggaagaggaggaggaggaggaggaagaagaaggggag
gaggaggaggaaggaggggaaggagaggagttgggggaggaagaggaggtggaggaggag
ggtgatgttgatgacagtgatgaagaagaggaggaagaggaggaaagctcttccgagggc
ttggaggccgaggactgggcccagggagtagtggaggccggaggcagcttcgggggttac
agtacccaggaggaggcccagtgccctaccctccatttcctggaaggtggggaagactct
gagtcagacagtgaggaagaggaggaagatgaggatgaggatgaggaggatgaagacgac
gaagatgatgatgaggatagtgatgaggtgcctgtacccagctttggggaggccatggct
tactttgccatggttaagaggtacctgacctccttccccattgatgaccgtgtgcagagc
cacatcctccacttggaacatgatctggtccatgtgactaggaagaatcacgccaggcag
gcgggagttcggggtcttggacatcaaagctga

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