Sciurus carolinensis (gray squirrel): 124975990
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Entry
124975990 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 7-like
KO
K08622
a disintegrin and metalloproteinase with thrombospondin motifs 7 [EC:3.4.24.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124975990
Peptidases and inhibitors [BR:
ncar01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
124975990
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin_5
TSP1_CCN
ADAMTS_CR_3
TSP1_spondin
Reprolysin_3
Reprolysin_2
TSP1_CFP_C
Reprolysin_4
PLAC
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
124975990
NCBI-ProteinID:
XP_047394523
LinkDB
All DBs
Position
2:78254847..78299195
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AA seq
1685 aa
AA seq
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MPGRQSPRSTTWLLRPLLLLLCALAPGALGPAPGRATEGWAAVDVVHPVRVDAGGSFLSY
ELWPRALRKRDVSARRDLPSFYELQYRGRELRFNMTANPYLLAPSFVSETRRRGGLGRTH
IRTRVQACYLLGEVQDPELEGGLAAISVCDGLKGVFQLSNEDYFIEPLEGVPAQPGHAQP
HVVYKRQAPERQAEQGDSRAPGTCGVQVSLELEPRRERWEQRQQWRRQRPRRLHQRSVSK
EKWVETLVVADAKMVEYHGQPNVESYVLTIMNMVAGLFHDPSIGNPIHITIVRLVLLEDE
EEDLKITHHADNTLRSFCKWQKNINMKGDAHPLHHDTAILLTRKDLCAAMNHPCETLGLS
HVAGMCQPHRSCNINEDTGLPLAFTVAHELGHSFGIQHDGSGNDCEPVGKRPFIMSPQLL
YDAAPLTWSRCSRQYITRFLDRGWGLCLDDPPADDVIDFPSVPPGVLYDVSHQCRLQYGA
YSAFCDDMDNVCHTLWCSVGTTCHSKLDAAVDGTRCGESKWCLNGECVPMGFRPEAVDGG
WSGWSAWSVCSRSCGVGVQSAERQCTQPTPKYKGKYCVGERKRFRLCNLQACPPGRPSFR
HVQCSHFDAMLYKGQLHTWVPVVNDVNPCELHCRPSNEYFAEKLRDAVVDGTPCYQGQAS
RDLCINGICKNVGCDFEIDSGAVEDRCGVCHGNGSTCHTVSGTFEETEGLGYVDVGLIPA
GAREILIEEVAEAANFLALRSEDPDKYFLNGGWTIQWNGDYEVAGTTFTYARMGNRENLT
SPGPTSEPVWIQLLFQESNPGVRYEYTIHREAYDQSEVAPPEFSWHYGPWSKCTVTCGSG
VQRQSVYCMERQAGLVDEGHCDPLSRPDDRQRKCNEEACPARWWAGEWQLCSHSCGPQGL
SRRAVLCLRSVGLDEQSALEPSACEHLPRPPAETPCNHHVPCPATWAVGNWSQCSVTCGT
GTQHRNILCTNDTGVPCDETQRPASKATCPLPPCLRSLDALGPEGSGSGSSSPELFNEVD
FIPHHLAPRPLPTSSPEPAVMGNAIEEEDLKLDLPGPVFVDDFYYDYNFINFHEDLSYGP
FEKPSPDLGDTGDWVPPLQSSPAEPPIDTPLPVTEPPGSKEEEFQGAWTHGSWPSQAGDS
PTPPLEQNPGNPLVNFLSEEDAPDGTPDLGIPSLTKSPALDKDMKTPTAPGRPNEFLVGE
DSQSQPPTPWWDGTNEISKDKEETAGRRAPHLPQSPSSVWPPLPSVDTTLTSPSPDMVEL
WTGGTMAWGPALEGDLGPVYSQLWPTMGVDPPPPPPTAPMLGVWSRDSPLELGTPTFSTP
GSGSQDLQTLAVPGTFLPVVPADVGHMPWVTVLNPGPSGQPESSSPEVPLNPVLLSTQTQ
DSPAAGAPEAQPLEPSLAEEWSPADLMPTRNASWQVGNWSQCSTTCGLGAIWRLVRCSSG
RDEDCAPAGRPQPARRCHLRPCAAWHMGNWSKCSRSCGGGSSVRDVQCVDTRNLQPLRPF
HCQTGPAKPPTRQPCGTQPCLSWYISSWRECSEACGGGEQQRLVTCPEPGLCEEALRPNA
TRPCNTHPCTQWVVGPWGQCSAPCGGGVQRRLVKCVNTQTGLPEEDSDKCGHEAWPESSR
PCGTEDCELVEPPRCERDRLSFGFCETLRLLGRCQLPTIRAQCCRSCPPSGHGVPSRGHQ
RVARR
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcagacagagtccccgtagcaccacttggctgctgcgcccccttctcctgctc
ctctgcgctctggcgcccggcgccctcggacccgcaccagggcgcgcaactgaaggctgg
gcggccgtggacgttgtacacccggtgcgcgtggacgctgggggctccttcctgtcctac
gaactgtggccacgtgctctgcgcaagcgggatgtgtcggcgcgcagggacttgccctct
ttctatgagcttcagtaccgcggacgcgagctgcgcttcaacatgactgccaacccatac
ctcctggcccctagcttcgtgagtgagacccggaggcgcgggggcctgggtcgcacgcat
atccggaccagagtccaggcctgctacctgcttggggaagtgcaggacccagagcttgag
ggcggcctggcggccatcagcgtctgcgacggcttgaaaggtgtgttccagctttccaat
gaggactacttcattgagcccctggagggtgttccagcccagcctggccacgcccagccc
catgtggtgtacaagcgccaagcccctgagaggcaggcagagcaaggtgattccagggct
ccaggcacctgtggagtgcaagtgtccctggaactggagcctcggcgggagcgttgggaa
cagcggcaacagtggcggcggcagcgaccaaggcgtctacaccagcgctcagtcagcaaa
gagaagtgggtggagaccctggtggtggctgatgccaaaatggtggagtaccatgggcag
ccgaatgtggagagctacgtgctgactatcatgaacatggttgccggcttgtttcatgac
cccagcattgggaatcccatccacatcaccatcgtgcgcctcgtcctactagaagatgag
gaggaggacttaaagattacacaccacgcagacaacaccctgaggagcttctgcaagtgg
cagaaaaacatcaacatgaaaggggatgcccaccccctgcatcacgacaccgccatcctg
ctcaccaggaaggacttgtgtgcagccatgaaccatccctgcgaaaccctgggcctgtct
cacgtggcgggcatgtgccagccacaccgcagctgcaacatcaatgaggacactggcctc
cctctggcctttaccgtggcccatgaactcgggcacagttttggcattcagcatgacgga
agcggcaatgactgcgagccggttgggaaacggcctttcatcatgtctccacagctcctg
tacgacgctgccccgcttacctggtcccgctgcagccgccagtacatcaccaggttcctc
gatcgtgggtggggcctgtgcctggacgatcctcctgccgatgatgtcatcgatttcccc
tcagtgccacctggggtcctctatgacgtgagccaccagtgccgtctccaatatggagcc
tactctgctttctgtgatgacatggacaatgtctgccacacactctggtgctctgtgggg
accacctgtcactctaagctggatgcagctgtggacggcaccaggtgtggggagagcaag
tggtgtctcaatggggagtgcgtccctatgggcttccggcccgaggctgtggatggtggc
tggtctggctggagcgcctggtctgtctgctcccggagctgtggcgtgggtgtgcagagc
gctgagcggcagtgcacacagcccacgcccaaatacaagggcaagtactgtgtgggtgag
cggaagcgcttccggctctgcaaccttcaggcctgtccccctggtcgcccctccttccgc
catgtccagtgtagccactttgatgccatgctctacaagggccagctgcacacatgggtg
cctgtggtcaatgatgtgaacccctgtgagctgcactgccggccctcgaacgagtacttt
gctgagaagctgcgggacgctgtggtcgatggcactccctgctaccagggccaggccagc
cgtgacctctgcatcaacggcatctgcaagaatgtgggctgtgacttcgagattgactcg
ggtgctgtggaggaccgctgtggtgtgtgccatggcaacggctccacctgtcacaccgtg
agcgggaccttcgaggagactgagggactggggtacgtggatgtggggctgatcccagcc
ggtgctcgtgagatcctcatcgaggaggtggctgaggctgccaacttcctggccctgcgc
agcgaggacccggataagtacttcctcaacggtggctggaccatccagtggaatggggac
tacgaggtggcgggcaccaccttcacatatgctcgcatgggcaaccgggagaacctcaca
tccccaggtcccaccagtgagcctgtctggatccagctactgtttcaggagagcaacccc
ggggtgcgctatgagtacaccatccacagggaggcctatgaccagagtgaggtggcgccg
cctgagttctcctggcactatgggccctggagcaagtgcacagtcacctgtggctcaggt
gtgcagaggcagagtgtgtactgcatggagcgtcaggcaggacttgtggatgagggacac
tgtgaccccttgagtcggcctgatgaccgccaaaggaagtgcaacgaggaggcctgccct
gcccggtggtgggcaggagagtggcagctgtgctcccactcctgtggacctcaaggcctc
tcccgcagggctgtgctctgccttcgaagcgtggggctggatgagcagagcgccctggaa
ccttctgcctgtgaacatcttccccggccccctgcagaaactccatgcaaccaccatgtg
ccctgtcctgccacctgggctgtggggaactggtcgcagtgttcggtgacatgtgggact
ggcactcagcaccgaaatatcctctgcactaatgacactggtgtcccctgtgatgagacc
cagcggccagcaagcaaggccacctgccctctaccaccctgcctgcggtccctggatgca
ctgggccctgaaggctcaggaagtggttcctccagccctgagctcttcaatgaggttgac
ttcatcccccaccacctggccccacgccctttgcctacctcctcacctgaaccagcggtc
atgggcaatgccatcgaagaggaagacctgaagctggacttgccggggcctgtgtttgtg
gatgacttctactatgactacaatttcattaacttccatgaggacctgtcttatgggccc
tttgagaagcccagcccagacctgggggacacaggggattgggtgcccccgctccaaagc
tctcctgctgagccccctatcgatacccccttgcctgtcacagagcctcctggatccaag
gaagaggaatttcagggagcttggacccatggctcttggcccagccaggctggcgactcc
ccaaccccacccttggagcagaaccctgggaatcccttggtcaatttcttgtctgaggag
gatgctccagatgggactcctgatctggggatccccagcttgaccaagtcccctgcttta
gacaaagacatgaagacacctactgcccctgggagaccaaatgagttcctagtgggggag
gacagccagagccagccacctactccatggtgggatgggaccaatgagatctccaaggac
aaggaggaaactgcaggccgcagggcaccccacctgccccaaagccccagctctgtgtgg
cccccattgccctccgttgataccacccttacctctcctagccctgacatggtggagctg
tggacaggaggaactatggcctggggccctgcactggagggtgacttgggacctgtgtac
agtcagctgtggcccaccatgggggtggaccctccccctcctcctcccacagcccccatg
ctgggagtctggagcagggacagccccctggagctggggactcctaccttttcaacccca
ggatcaggctcacaggacctacaaactctggcagtgccagggaccttccttccagtagtg
cctgctgacgtagggcatatgccttgggtgactgttctgaacccaggaccctcaggccaa
ccagagtcctccagccctgaggtgcccctgaaccctgtgctgctgtccacacaaactcaa
gacagtcctgcagcaggagcccctgaggcccagcctctggagcctagcctggccgaggag
tggtcccctgcagacctgatgcccaccaggaatgccagctggcaagtggggaactggagc
cagtgctccaccacctgcggcctgggtgccatctggaggctggtgcgctgcagctctggc
agagacgaggactgcgcccctgctggtcggccccagcccgcccgccgctgccacctgcgg
ccctgtgccgcctggcacatgggcaactggagcaagtgctcccgcagctgtggtggaggt
tcctcagtgcgggacgtgcagtgtgtggatacgcggaacctacagccactgcggcccttt
cactgccaaactgggcctgccaagccacccacccgccagccctgcgggacccaaccctgc
ctcagctggtacatctcttcctggagggagtgctctgaggcctgtggtggcggagaacag
cagcgtctggtgacttgcccggagccaggcctctgtgaggaggcgctgagacccaacgcc
acaaggccgtgtaacacccacccctgcacacagtgggtggtggggccctggggccagtgc
tcagccccctgtggcggtggtgtccagcggcgcctagtcaagtgtgtcaatacccagacc
gggctgcctgaagaagacagtgacaagtgtggccatgaagcctggcctgagagctcccgg
ccttgtggcaccgaggattgtgagctggttgaacctccacgctgtgagcgggatcgcctg
tcctttggtttttgtgagacactgcgcctactgggccgctgccagctgcccaccatccgt
gcccagtgctgccgttcctgtcctccatctggccacggtgtcccctcccgaggtcatcag
cgggtggcccggcgctga
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