Sciurus carolinensis (gray squirrel): 124976031
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Entry
124976031 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: attractin-like
KO
K24332
attractin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ncar04091
]
124976031
Lectins [BR:
ncar04091
]
C-Type lectins
Others
124976031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
EGF_LMN_ATRN
Kelch_5
Kelch_3
CUB
Lectin_C
Kelch_6
Kelch_4
PSI
Kelch_2
NANM
EGF_TEN
EGF_Teneurin
PSI_integrin
EGF_laminin
EGF_2
Motif
Other DBs
NCBI-GeneID:
124976031
NCBI-ProteinID:
XP_047394584
LinkDB
All DBs
Position
2:28900785..29041255
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AA seq
1428 aa
AA seq
DB search
MVAAAAATEARLRRRRTAATAAPSGRKGGRHWDWDVTGAGRPGPGAGLRLPGLLSPSLPP
PLLLLVLPPLLLLLLLPWEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVCP
AGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATEC
SWDHLYVYDGDSIYAPLIAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGF
NITYNFDMCPNNCSGRGECKTSNSTGSVECECSENWKGDSCDIPYCTDNCGFPHRGICNS
SDVRGCSCFSEWQGPGCSVPVPANQSFWTREEYSNLKLPRASHKAVVNGNIMWIVGGYMF
NHSDYSMVLAYDLASREWLPLNHSVNNVVVRYGHSLALYKDKIYMYGGKIDSTGNVTNEL
RVFHIHNESWVLLTPKAKEQYAVVGHSAHIVKLKTDRVVMLVIFGHCPLYGYISNVQEYD
LDKNTWSILHTQGALVQGGYGHSSVYDHRTKALYVHGGYKAFSANKYRLADDLYRYDVDT
QMWTILKDSRFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRWS
VLPRPSLHHDVNRFGHSAILHNSTMYVFGGFNSLLLSDILIFTSEQCEAHQSEAACVAAG
PGVRCVWDTRLSQCISWELATEEQAEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDCH
WCNDHCVPMNHSCTEGQISIPRYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQECI
ALPENICGVGWHLVGNSCLKITTAKENYDNAKLYCRNHNAFLASLTTQKKVEFVLKQLQI
MQPSQSMSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPTT
RGLKAATCINPLNGSICERPANHSAKQCRTPCALRTACGECTSSSSECMWCSNMKQCVDS
NAYVASFPFGQCMEWYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCMEGSY
KGPVKMPPQASAGAAYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCE
NLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLCE
VENRYQGNPLKGTCYYTLLIDYQFTFSLSQEXDRYYTAINFVATPDEQNRDLDMFINASK
NFNLNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNFT
WPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVGRXQTSCWASRRREQLLREMQ
QMASRPFASVNVALETDEEPPDLIGGSIKTVPKPIALEPCFGNKAAVLSVFVRLPRGLGG
IPPPGQSGLAVASALVDISQQMPIVYKEKSGAVRNRKQQPPAQPGTCI
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggccgcggcggcgactgaggctaggctgaggaggaggaggacggcggcgacg
gcagcgccctcgggcaggaagggcgggcggcattgggattgggacgtgacaggggctggg
aggccgggaccgggggccgggctgcgtctcccaggactgctgtcgccgtcactaccgccg
ccactgctgctgctggtgctcccgccgctactgctgctgctactgctgccctgggaggcc
gaggccgcagccgccgccgcggcagtgtcgggctcagccgcagcagaggccaaggaatgt
gaccggccctgtgtcaacggcggccgctgcaaccctggcactggccagtgcgtctgcccc
gccggctgggtgggcgagcaatgccagcactgcgggggccgcttcagactgactggatct
tctgggtttgtaacagatggacctggaaattataaatataaaacgaagtgcacgtggctt
attgaaggacagccaaataggataatgagacttcgttttaatcattttgctacagagtgt
agttgggaccacttatatgtttatgatggggactcaatttatgcaccactaattgctgcc
tttagtggcctcattgttcctgagagagatggcaatgagacggtccctgaggtggttgcc
acatcaggttatgcccttctgcatttttttagtgatgctgcttataatttgactggattt
aatatcacttacaattttgacatgtgtccaaataattgctcaggccgaggagaatgtaag
accagcaacagtaccggcagtgtggagtgtgaatgttctgaaaactggaaaggtgactcg
tgtgacattccttactgtacagacaactgtggttttcctcatcgaggcatctgcaattca
agtgatgtcagaggatgctcctgcttctctgagtggcagggtcctggatgctcagttcct
gtgccagctaaccagtcattttggactcgagaggaatactcgaacttaaagctgcccaga
gcgtctcataaagctgtggtcaatggaaacataatgtggattgttggaggatatatgttt
aatcactcagattacagcatggttctagcgtatgaccttgcttctagggaatggcttcca
ctaaaccattctgtgaacaatgtggttgttagatatggtcattctttggctttatataag
gataaaatttacatgtatggaggaaaaattgattcaacaggcaatgtgaccaatgagttg
agagtgtttcatattcataatgaatcatgggtattgttgaccccaaaggcaaaggagcag
tatgcagtggttgggcactcagcacacattgttaaactgaaaactgaccgggtggtcatg
ctggtcatctttggtcactgcccactctatggatatataagcaatgtgcaggaatatgac
ttggataagaacacctggagtattttgcacacccagggtgcccttgtgcaagggggttat
ggccacagtagtgtttatgatcacaggaccaaagccctgtacgtccacggtggttacaaa
gctttcagtgccaataaataccggctggcagatgacctctacagatacgacgtggacacc
cagatgtggaccattcttaaggacagccgatttttccgttacttgcacacagctgtgata
gtgagtggaaccatgctggtgtttggaggaaatacacacaacgacacatccatgagtcat
ggtgccaaatgcttctcttcagatttcatggcttatgacattgcttgtgaccgctggtca
gtgcttcccagacctagtctccaccatgatgtcaacagatttggccattctgcgatctta
cataacagcaccatgtatgtgtttggcggtttcaacagtctcctcctcagcgacatcctc
atattcacctcagaacagtgtgaagcacaccagagtgaagctgcttgtgtggcagcagga
cctggtgtccgatgtgtgtgggacacaaggttatctcagtgcatctcctgggagttggca
actgaagaacaagcagaaaagttaaaatcagaatgtttctccaaaagaactcttgaccat
gacagatgtgaccagcacacagattgttacagctgcacagccaacaccaatgactgccac
tggtgcaatgaccattgtgtccctatgaaccacagctgcacagaaggccagatctccatt
ccaaggtatgagaattgccccaaggataaccctatgtactactgtaacaagaagaccagc
tgtaggagttgtgccttggaccagaactgccagtgggagccccggaatcaggagtgtatt
gccctgcctgaaaatatctgtggcgttggctggcatttggttggaaactcgtgtttgaaa
attactactgccaaggagaattatgacaatgctaaattgtactgtaggaaccacaatgcc
ttcttggcttccctcacaacccagaagaaagtggaatttgtccttaagcagctacaaata
atgcagccgtcacagagcatgtccaaactcaccttaaccccatgggttggccttcggaag
atcaatgtgtcctactggtgctgggaagatatgtctccatttaccaatagtttactgcag
tggatgccatctgagcccagtgatgccgggttctgtggaatcttgtcagaacccactact
cggggattaaaggctgcaacctgcatcaaccctctcaatggcagcatctgtgaacggcct
gcgaaccacagtgccaagcaatgccgaacgccatgcgccttgcggactgcgtgtggggag
tgcaccagcagcagctctgagtgcatgtggtgcagcaacatgaagcagtgtgtggactcc
aacgcctatgtggcctcctttcctttcggccagtgtatggagtggtataccatgagtagc
tgcccccctgaaaattgttcaggctattgtacctgcagtcattgcctggagcagccaggc
tgtggctggtgtaccgatcccagcaacactgggaaagggaagtgcatggagggatcctac
aaaggaccagtgaagatgcctccacaggcctctgctggagccgcctatccacagcccctt
ctgaattccagcatgtgtctggaggacagcagatacaactggtctttcattcactgtcca
gcttgccagtgcaacggccacagcaagtgcatcaaccagagcatctgcgagaagtgcgag
aacctgaccaccggcaagcactgcgagacctgcatatctggcttctatggcgatcccacc
aatggaggcaaatgccagccatgtaagtgcaacgggcacgcttccctgtgcaataccaac
actggcaagtgcttctgcaccaccaagggtgtcaagggagatgaatgccagctatgtgag
gtagaaaatcgataccagggaaatcctctcaaaggaacatgttattatactcttctcatt
gactatcagttcacttttagcctctcccaggaangtgatcgctattacacagccatcaat
tttgtagctactcctgatgaacaaaatagggatctggacatgttcatcaacgcctccaaa
aacttcaacctcaacatcacctgggctgccagcttttcagctggaacccaggctggagaa
gagatgcctgttgtttcaaaaaccaacattaaggagtacaaagacagtttctctaatgaa
aagtttgattttcgaaaccacccaaatatcactttcttcgtttatgtcagtaatttcacc
tggcccatcaaaattcagattgccttctctcagcacagcaattttatggacctggtacag
ttcttcgtgactttcttcagttgtttcctctctttgctcctggtggctgctgtggttgga
aganntcaaacaagttgttgggcttccaggcgtagggagcaacttcttcgagagatgcag
cagatggccagccgtccctttgcctctgtaaatgttgccttggaaacagatgaagagcct
cctgatcttattggggggagtataaagaccgttcctaaacccattgctctggagccatgt
tttggcaacaaagctgctgtcctctctgtgtttgtgaggctccctcgaggcctgggtgga
atccctcctcctgggcagtcaggtcttgccgtggccagcgccctggtggacatttctcag
cagatgccaatagtgtacaaagagaagtcaggagctgtgagaaaccggaagcagcagccc
cctgcacaacctggaacctgcatttga
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