Sciurus carolinensis (gray squirrel): 124976107
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Entry
124976107 CDS
T08117
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03250
Viral life cycle - HIV-1
ncar04623
Cytosolic DNA-sensing pathway
ncar05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124976107
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124976107
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
124976107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124976107
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
124976107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
DUF1368
SAM_PNT
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
124976107
NCBI-ProteinID:
XP_047394791
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All DBs
Position
2:21181838..21226612
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AA seq
614 aa
AA seq
DB search
MRRSDSEQPSKRPRCDGSPRTPPNTPSAAANGTPRPKLHPDHRTWDPEQVCSFLQHCGFQ
ESALLENFRANKITGSQLLCLDESHLDYLGVRSLVERKKLLNCIQRLSKVHFEAMKVIND
PIHGLIGLHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVR
TLCEKQPELPISERDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVQM
FEHLINSNGLRSVMEDYDLVPEEDICFIKEQIIGPPETPVKDSLWPYKGRPQEKSFLYEI
VSNKRNGIDVDKWDYFARDCHHLGMQNNFDHNRFIKFARVCEVDNEKPICAREKEVGNLY
DMFYTRNRLHRKAYQHRVSNLIDTMVADAFLKADPYIEITGANGKKYHISTAIDDMEAFT
KLTDNVFLEILHSTDPKLDAARRILKNIESRNLYTFVGETQPPEAKKIEREDYEHLPKEV
ADAKPSGILLEAELKAEDFMVDVINMDYGMKDKNPIDHVYFYCKSDPSKAIKINKSQVSQ
LLPERFAEQLIRVYCKKKDEKSLFAARQHFVQWCLTKNYSKPQDGDVVAPLITPRKPEWN
SRDSAHRASKRLEF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcggagatccgattcggagcagccctctaagcggccccgatgcgatggcagcccaaga
accccaccaaacactccttctgcagcggcgaacgggaccccgcgcccgaaactccacccc
gaccaccggacctgggacccagagcaggtgtgctccttcctacagcattgtggcttccag
gagtccgcactgctggagaacttccgagcaaataaaatcacaggttcacagctactctgt
cttgatgagtcacatcttgactatcttggagttagatccttggtggagaggaagaagctg
cttaattgtatccaacgattgagtaaagttcattttgaggcaatgaaggtaattaatgat
cctatccatggcctcattgggctccaccctcttcttatccgaattattgacacacctcaa
tttcagcgtcttcgatacattaaacagttgggaggcggttactatgtttttccaggagct
tcacacaatcgatttgagcacagtctaggggtggggtatctagcaggatgtctagttcgc
acactgtgtgaaaaacaaccagagctgccgataagtgagcgagatatactctgtgttcag
attgctgggctttgtcatgatcttggtcatgggccattttctcatatgtttgatgggaga
tttatcccacttgctcgcccggaagtgaaatggacgcatgaacagggctcagttcaaatg
tttgagcatcttataaattctaatggactcagaagtgtcatggaagactatgatctcgtc
cctgaggaagatatttgctttatcaaggaacaaattataggaccacctgaaacaccagta
aaagattctttgtggccatataaaggacgtcctcaagagaaaagctttctttatgagata
gtatctaataaaagaaatggcatcgatgtggataaatgggattattttgccagggactgc
catcatcttggaatgcaaaataattttgatcacaatcgctttattaagtttgcccgtgtc
tgtgaagtagataatgagaagcctatttgtgctagagaaaaggaggttggaaatctatat
gatatgttctacacacgtaacaggttacaccgcaaagcttatcaacacagagttagcaac
ctcattgatacaatggttgcagatgctttcctcaaagcagacccctacatagagattaca
ggtgctaacgggaaaaaatatcacatttctacagcaattgatgacatggaagccttcact
aagctgacagataacgtttttctggagattttacactccactgatcccaaattggacgca
gcacgaaggattttgaaaaatattgaatcccgtaatctctacacgtttgtgggtgagacc
cagccaccagaagcaaagaagattgaaagggaagactatgaacaccttccaaaagaggtt
gccgatgctaaacctagtggtatactcctggaggctgaattgaaggctgaagatttcatg
gtggatgttatcaacatggattatggaatgaaagacaagaatccaattgatcatgtttac
ttctattgtaagagtgaccccagcaaagccatcaagataaataaaagtcaggtttcacag
cttctaccagagagatttgcagagcagctgattcgagtgtattgtaagaagaaagatgaa
aagagtttgtttgctgcacgacaacatttcgttcagtggtgtctaaccaagaactacagc
aagccgcaggatggcgatgttgtcgccccacttataacacctcgaaaaccagagtggaat
tccagggattcagcccacagagcatccaaacgccttgagttttga
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