Sciurus carolinensis (gray squirrel): 124976115
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Entry
124976115 CDS
T08117
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03410
Base excision repair
ncar04140
Autophagy - animal
ncar04217
Necroptosis
ncar04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124976115
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124976115
09143 Cell growth and death
04217 Necroptosis
124976115
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
124976115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124976115
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124976115
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124976115
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
124976115
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
124976115
MMR (mismatch excision repair)
Other MMR factors
124976115
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124976115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
RNA_pol_3_Rpc31
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
124976115
NCBI-ProteinID:
XP_047394809
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All DBs
Position
2:26116992..26117865
Genome browser
AA seq
204 aa
AA seq
DB search
MGKGDPKKSRCKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKKKGKS
EDMAKADKFHYEREMKTYIPPKGETKKKFKDPKAPKRPPLAFFFFCSEYHPKIKGEHPGL
SIGDVAKKLEEMWNNTAADDKQPYEKQAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEEEEDEDEDEEDDDDE
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagtcgagatgcaaaatgtcatcatatgcattctttgtg
caaacttgccgagaggagcacaagaagaagcacccagatgcttcagtcaacttttcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaaaagaaaggaaaatct
gaagacatggcaaaagcggacaagttccattatgagagagaaatgaaaacctatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaaggcacccaagaggcctccgttg
gccttcttctttttctgttctgaatatcacccaaaaatcaaaggagaacatcctggtcta
tccattggtgatgttgcaaagaaactggaagagatgtggaataacactgctgcagatgat
aagcagccttatgaaaagcaagctgctaagctgaaggaaaaatacgaaaaggatattgct
gcctaccgagctaaaggaaaacctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagaggaggaagatgaagatgaagatgaagaagat
gatgatgatgaataa
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integrated database retrieval system
