Sciurus carolinensis (gray squirrel): 124976142
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Entry
124976142 CDS
T08117
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04350
TGF-beta signaling pathway
ncar04360
Axon guidance
ncar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124976142
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124976142
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124976142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124976142
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
DCC/UNC5 family
124976142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Ig_5
fn3_2
Tissue_fac
SusE
TMEM154
EphA2_TM
TM_ErbB1
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
124976142
NCBI-ProteinID:
XP_047394888
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All DBs
Position
2:complement(82739462..82972473)
Genome browser
AA seq
1482 aa
AA seq
DB search
MAAERGARRLFSTSSLWLYCLLLLLGRPAPGAAAARSGSPPQSAGASIRTFTPFYFLVEP
VDTLSVRGSSVILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLFISNVVHSKH
NKPDEGYYQCVATVDSLGTIVSRTAKLTVAGLPRFTSQPEPSSVYAGNSAILNCEVNADL
VPFVRWEQNRQPLLLDDRVIKLPGGTLVISNVTEGDGGLYRCVVESGGPPKYSDEAELKV
LPDPEETPNLVFLKQPSSLVRVVGQSAVLPCVASGLPAPAMRWMKNEEALDMEGSERLVL
LAGGSLEISDITEDDAGTYFCIADNGNETIEAQAELTVQAQPEFLKQPANIYAHESMDIV
FECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNA
QAGAQLIILEHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASLVSTRFIKLTW
RTPASDSHGDNLTYSVFYTKEGIARERVENTSRPGEMQVTIQNLMPATVYIFRVVAQNKH
GSGESSAPLRVETQPEVQLPGPAPNIRAYATSPTSITVTWETPLSGNGEIQNYKLYYMEK
GTDKEQDVDISSHSYTLNGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTFSDVPSAAPQN
LSLEVRNSKSIMIHWQPPSPATQNGQISGYKIRYRKASRKSDVTETLVTGTQLSQLIEGL
DRGTEYNFRVAALTVNGTGPATDWLSTETFESDLDETRVPEVPSSLHVRPLVTSIVVSWT
PPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGI
PLYESAVTRPHTDTSEVDLFVINAPYTPVPDPTPMMPPVGVQASILSHDTIRITWADNSL
PKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSS
TWSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVN
AEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKADSSDK
MPNDQASGSAGKGSRLPDLGSDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVV
VVIIAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSP
DPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMM
PFDSQPPQPVISAHPIHSLDNPHHHFHSSSLASPARSHLYHPGSPWPVGTSMSLSDRANS
TESVRNTPSTDTMPASSSQTCCTDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPL
KSFAVPAIPPPGPTTYDPALPSTPLLSQQALNHHIHSVKTASIGTLGRSRPPMPVVVPSA
PEVQETTRMLEDSESSYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcggggagcccggcgactcttcagcacctcctccctctggctctactgc
ctgctgctgctgcttgggcgcccggcgccgggcgctgcggctgccaggagcggctccccg
ccgcagtccgcaggtgccagcattcgaacattcactccattttattttctggtggaacca
gtggatacactctcagttagaggctcctctgttatattaaattgttcagcatactctgaa
ccttctccaaaaatcgaatggaaaaaagatggaacttttttaaacttagtatcagatgat
cgacgccaacttcttccagatggatctttatttatcagcaatgtggtgcattccaaacac
aataaacctgatgagggttattatcagtgtgtggccactgttgatagtcttggaactatt
gtcagcagaacagccaagctcacagtagcaggacttccaagatttaccagtcaaccagaa
ccttcctcagtttatgctgggaacagtgcaattctgaattgtgaagttaatgcagatttg
gttccatttgtgaggtgggaacagaacagacagccccttcttctggatgatagagttatc
aaacttccaggtggaacactggttatcagtaatgtgaccgaaggagatgggggactctat
cgctgcgtagttgaaagtggtgggccaccaaagtacagtgatgaagctgaattgaaagtt
cttccagatcctgaggaaacacccaacttggtatttttgaagcaaccttcttccttagtc
agagttgttggtcagagtgcagtattgccatgtgttgcttcaggacttcctgctccagcc
atgagatggatgaaaaatgaggaggcccttgacatggaaggctctgaaagattggtcttg
ctggcaggtggtagcctggaaatcagtgatatcactgaggatgatgctgggacttatttt
tgtattgctgataatggaaatgaaacaattgaagctcaagcagagcttacagtacaagcc
caacctgagttcctgaaacaacctgctaatatatatgctcatgaatccatggatattgta
tttgaatgtgaagtaactgggaaaccaactccaactgtgaagtgggtcaagaatggggat
atggttatcccaagtgattactttaagattgtaaaggaacataatcttcaagttttgggt
cttgtgaaatcagatgaagggttctatcagtgcattgctgagaatgatgttggaaatgca
caagctggagctcaactgataatccttgaacatgatgttgccatcccaacattacctccc
acttcactgaccagtgccactactgaccatctagcaccagccacaacgggaccactgcct
tcagctcctcgggatgtcgtggcctccctggtctctacccgcttcatcaaattaacatgg
cgaacacctgcatcagattctcatggcgataacctcacctattctgtattctacaccaag
gaaggaattgctcgggaacgtgttgagaacaccagtcgcccgggagagatgcaagtaacc
attcaaaatctaatgccagcgactgtgtacatctttagagttgtggctcaaaacaagcat
ggctctggagagagttcagctccactacgagtagaaacacagcccgaggtccagctccct
ggcccagcacctaacatccgagcttatgcaacatctcctacttccatcactgtcacatgg
gaaaccccattgtctggcaatggggaaattcagaattacaaattgtactacatggaaaaa
gggactgataaagaacaggatgttgatatttcaagtcactcctacacccttaatggattg
aaaaaatatacagagtatagtttccgagtggtggcctacaataaacatggtcctggagtc
tccacacaggatgttgctgttcgaacattttcggatgttcccagtgctgctcctcagaat
ctgtccttagaagtgagaaattcaaagagtattatgattcactggcagccaccttctcca
gccacacagaatgggcagatctctggctacaagattcgataccgaaaggcctcccgtaag
agtgatgtcactgagaccttggtaactgggacacaactgtctcagttgatcgaaggtctt
gatcggggtactgagtataatttccgagtggctgccttaacagtcaatggtacgggcccg
gcaactgactggctgtctactgaaacttttgagagtgacttagatgaaactcgtgttcct
gaagtgcctagctctcttcatgtccgcccacttgtcacgagcattgtagtaagctggact
cctccagagaatcagaacattgtagtcagaggttatgccattggttatggcattggtagc
cctcacgcccagaccatcaaagtggactataaacagcgctattacaccattgaaaatctg
gatccaagctctcactatgtgattaccctgaaagcatttaacaacgtgggtgaaggcatc
cccctgtatgagagtgccgtgaccaggcctcacacagacacttctgaagttgatttattt
gttattaatgctccatacactccagtgccagatcccactcccatgatgccaccagtggga
gttcaggcttccattctgagtcatgacaccataaggattacatgggcggacaactcactg
cccaaacatcagaagattacagactcccggtactacacagttcgatggaaaaccaacatc
cctgcaaacaccaagtacaagaatgcaaatgcaacgactttaagttacttggtgacgggt
ttaaaaccaaatacactctatgaattctctgttatggtgaccaaaggtcgaagatcaagc
acatggagtatgacagcacatgggaccacctttgaattagttcctacttctccacctaaa
gatgtaacagttgtgagcaaagagggaaaacctaggaccataatagtgaactggcagcct
ccttctgaagccaatggcaaaattacaggttatatcatatattacagtacagatgtgaat
gcggagatacatgactgggttattgagcctgtcgtgggtaacaggctgactcaccagatt
caagagttaacacttgacacgccatactacttcaaaatccaggcccggaattcaaagggc
atggggcccatgtctgaagctgtccaattcagaacacctaaagcggactcctctgataaa
atgcctaatgatcaagcctcagggtctgcaggaaaaggaagccggctgccagacctagga
tccgactacaaacctccaatgagtggaagcaacagccctcatgggagccccacctctcct
ctggacagtaacatgctgctggtcatcattgtttctgttggcgtcatcaccattgtggtg
gttgtgatcattgctgtcttttgcacaaggcgcaccacatctcaccagaaaaagaagcgg
gctgcatgcaaatcagtgaatggttcccacaagtacaaagggaattccaaagatgtcaaa
cctccagacctatggatccatcatgagagattggagctgaaacctattgataaatctcca
gacccaaaccccatcatgacagatactccaattcctcgtaattctcaggatatcacacct
gttgacaattcaatggacagtaatatccatcaaaggcggaattcatacagagggcatgaa
tcagaggacagtatgtctacactggctggaaggcgaggaatgagaccaaaaatgatgatg
ccctttgactctcagccaccccagcctgtgattagtgcccatcccatccattccctcgat
aaccctcaccatcatttccactccagcagcctcgcttctccagctcgcagtcatctctac
cacccgggcagcccatggcccgttggcacatccatgtccctttcagacagggccaattcc
acagaatctgttcgaaatactcccagcaccgacaccatgccagcctcctcatctcaaaca
tgctgtactgatcatcaggatcctgaaggtgctaccagctcctcttacttggccagctcc
caagaggaagattcaggccagagtcttcccacagcccatgttcgcccttcccacccattg
aagagcttcgctgtgccagcaatcccacctccaggacctactacctatgatcctgcattg
ccaagcacaccgttactatcccagcaagctctgaaccatcacattcactcagtgaagaca
gcctccatcggaactttaggaaggagccggcctcctatgccagtggttgttccaagtgcc
cctgaagtacaggagaccacgaggatgctggaagactctgagagtagctatgaaccagat
gagctgaccaaagagatggcccacctggaaggactaatgaaggacctaaatgccattaca
acagcgtga
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integrated database retrieval system
