Sciurus carolinensis (gray squirrel): 124976159
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Entry
124976159 CDS
T08117
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124976159
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124976159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
124976159
NCBI-ProteinID:
XP_047394942
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All DBs
Position
2:21246534..21311629
Genome browser
AA seq
1656 aa
AA seq
DB search
MEAPAGEPPARGCVPPPAPVLERKKSHRAPSPARPKDVAGWSLAKGRRGPGPGAAAACSA
ASSARPDKKGRAVAPGARGAGARVAGVRTGVRAKGRPRPGTGPRPPPPPPSLTDSSSEVS
DCASEEARLLGLELALSSDAESAAGGPAGARAGQPQPAPSAHQPPRPPASPDEPSMAASS
VGSSRLPLSASLAFSDLTEEMLDCGPGGFVRELEELRSENDYLKDEIEELRAEMLEMRDV
YMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRAAQTGQVDGELIRGLEQDVKV
SKDISMRLHKELEVVEKKRARLEEENEELRQRLIETELAKQVLQTELERPREHSLKKRGT
RSLGKTDKKPSAQEDSADLKCQLHFAKEESALMCKKLTKLAKENDSMKEELLKYRSLYGD
LDAALSAEELADAPHSRETELKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKDHG
GGCGGPEARLAFSALGGSECGESLAELRRHLQFVEEEAELLRRSSAELEDQNKLLLSELA
KYRSEHELDVTLSEDSCSVLSEPSQEELAAAKLQIGELSGKVKKLQYENRVLLSNLQRCD
LASCQSTRPMLETDAEAGDSAQCVPAPLGEAHEPHAARLCRAREAEALPGLREQAVLVSK
AIDVLVADANGFSAGLRLCLDNECADFRLHEAPDNSEGPRDAKLMHALLVRLSVLHQELN
AFTRKADAVLGGSAKEQPEPFSALPALGSQGPSKEIILAKDLASDFQPSDFRDLPEWEPR
IRETFRTGDLDSKSDPSRSFRPYRAEDNDSYASEIKELQLVLAEAHDSLRGLQEQLSQER
QLRKEEADNFNQKMVQLKEDQQRALLRREFELQSLSLQRRLEQKFWSQEKNMLVQESQQF
KHNFLLLFMKLRWFLKRWRQGKVLPSEGDDFLEVNSMKELYLLVEEEEISAQHSDNKACT
GDGWTQNTPNEYIKTLADMKVTLKELCWLLREERRGLTELQQQFAKAKATWETERAELKG
HATQMELKAGKGPGERAGPEWKAALQREREEQQHLLAESYSAVMELTRQLQISERNWSQE
KLQLVERLQGEKQQVEQQVKELQNRLSQLQKAADPWVLKHSDLEKQDNSWKETRSEKMHD
KEAVSEAELGGTGLKRTKSVSSMSEFESLLDCSPYLAGGDARGKKLPNNPAFTFVSTEPV
DPEKDTKEKAGLTPQDSNRLGALACQDPAGRHMQRSYTAPDKTGIRVYYSPPVARRLGVP
VVHDKEGKILIEPGFLFTTAKPKESAEADGLAESSYSRWLCNFSRQRLDVGSGGSPSPAG
PAFPAALHDFEMSGNMSDDMKEITNCVRQAMRSGSLERKVKSTSSQTVGLASVGTQTIRM
VSVGLQTDPPRSSLHSKSWSPRSSSLVSVRSKQISSSLDKVHSRIERPCCSPKYGSPKLQ
RRSVSKLDSTKDRSLWNLHQGKQNGSAWARSTTTRDSPVLRNINDGLSSLFSVVEHSGST
ESVWKLGMSETRAKPEAPKYGIVQEFFRNVCGRAPSPTATAGEEGAKKPEPLSPASYHQP
EGVARILSKKVAKSGSGEEARASMLPQVGKDGVPREGDGTSVLPSEDAVCDCSAQSLASC
FARPSRSAIRHSPSKCRLHPSESGWGVEERVAPASE
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccggcgggcgagcccccggcgcggggctgcgttcccccgcccgcgccggtc
ctggagaggaagaagagccaccgcgcgccgtcgccggcccggcccaaggacgtggccggc
tggtcgttagccaagggccgccgcggcccaggcccgggcgccgctgccgcctgtagcgcc
gcatcctcagcgcggcccgacaagaaggggcgcgcagtggcgccaggggcgagaggcgcg
ggggcgcgggtggccggggtccgcaccggggtccgcgccaagggccgcccgcgtccgggt
accgggccgcgacctccgcctccgcctcccagtctcaccgacagcagctccgaggtgtcc
gactgcgcgtcggaggaggcgcgcctgctgggcctggagctggcgctgagcagcgacgcc
gagtcggcggccgggggtccggcgggggcccgcgccgggcaacctcagcccgcgccatcc
gcgcaccagcctccgcggccacccgcttcccccgatgagccatcgatggccgcgtcgtcg
gtgggcagcagccgtctgcctctcagtgcctcgctcgccttctctgacctcacggaggag
atgctggactgcgggcccggcggcttcgtgcgtgagctggaggagctgcgctccgagaac
gactatctcaaggatgagattgaggagctgcgggctgagatgctggagatgcgggacgtc
tacatggaggaagatgtgtaccagctgcaggagctgcggcagcagctggaccaggccagc
aagacctgccgcatcctgcagtacaggctgcgcaaagctgagcgccgcagcctgcgcgcc
gcccagactggccaggtggacggggagctcatccgaggtctggagcaggatgtcaaggtc
tctaaggacatctctatgcggctgcacaaggagctcgaggtggtggagaagaagcgagca
cgactggaggaggagaacgaggagctccggcagcggctcatcgagaccgagctggccaag
caagtgctgcagacggagctggagcgaccaagagagcattccttgaagaaaagaggaacc
cgctccctggggaagacagacaagaagccttcagctcaggaggacagcgcagatctgaag
tgtcagctgcactttgccaaggaggagtcggccctcatgtgcaagaagctcaccaagctg
gccaaggagaacgacagcatgaaggaggagctgctcaagtaccgctccctctacggggac
ctggacgctgccctgtccgccgaggagctggctgatgctccacactcacgggagaccgag
ttgaaggtgcacctgaagctggtggaggaggaggccaacctgctgagccgccgcatcgtg
gagctggaggtggagaaccggggcctgcgggcagagatggacgacatgaaggatcacggt
ggtggctgtggggggcccgaggctcggctggccttctctgcactgggtggcagcgagtgt
ggggagagcctggcagaactgcggcgacatctgcagttcgtggaggaggaggcggagctg
ctgcggcgctcctccgcggagctcgaggaccagaacaagctgctgctgagcgagctggcc
aagtaccgctcggagcacgagctggacgtgacgctgtcggaggacagctgctcggtgctc
agcgagccctcgcaggaggagctggcggccgccaagctgcagatcggcgagctcagcggc
aaggtcaagaagctgcagtacgagaaccgcgtgctgctttccaacctccagcgctgtgat
ctcgcttcctgccagagcacgcggccaatgctggagacggacgccgaggctggggactct
gcccagtgtgtgcccgctcccctcggcgaggcgcacgagccccacgcggcccgactctgc
agagcccgggaggccgaggcgctgcctgggctgagggagcaggcggtcctggtcagcaaa
gccattgacgtactggtggccgatgccaatggcttctccgcgggccttcggctctgtctg
gacaatgaatgtgctgacttcaggctgcacgaggcccctgataacagtgagggccccagg
gacgccaagctcatgcacgccctcctggtgcggctgagcgtgctgcatcaggagctcaac
gccttcacgcggaaggcggacgcggtcctcggtggctctgccaaggaacagccagagccc
ttctctgcgctgcccgccttgggctcccaggggccctccaaggagatcattctggccaag
gaccttgcctctgactttcagccgtctgacttcagggacctgccagaatgggagcccagg
atccgagagaccttccgcactggcgacttggactccaaatctgaccctagtcggagcttc
aggccttatcgagctgaagacaatgattcctatgcctccgagatcaaggagctgcagctg
gtgctggccgaggcccatgacagcctccggggtttgcaggaacagctctcccaggagcgg
cagctacggaaggaggaggctgacaacttcaaccagaaaatggtccagctgaaggaggac
cagcagagggcgctgctcaggcgggagttcgagctgcagagtctgagcctccagaggcgg
ctggagcagaaattctggagccaggagaagaacatgctggtgcaggagtcccagcagttc
aagcacaacttcctgctgctcttcatgaagctcaggtggttcctgaagcgctggcggcag
ggcaaggtcttgcctagcgagggggatgacttcctggaggtgaacagcatgaaggagctg
tacctgctggtggaggaagaggagataagcgcccagcattctgacaacaaggcctgtacg
ggagacggctggacccagaacacgcccaatgagtacatcaagaccctggcggacatgaag
gtgacgctgaaggagctgtgctggctgcttcgtgaggagcgccgaggtctcactgagctt
cagcagcagtttgccaaggccaaggccacctgggagacagagcgggcggagctcaagggc
cacgccacccagatggagctgaaggccgggaagggtcccggcgagcgggcagggcccgag
tggaaggcggccctgcagagggagcgtgaagagcagcagcacctcctggccgagtcctac
agcgcggtcatggagttgacgcggcaactgcaaatcagcgagcgcaactggagccaagag
aagctgcagctagtggagcggctgcagggtgagaagcagcaggtggagcagcaggtgaag
gagctgcagaaccgcctgagtcagctgcagaaggctgctgacccctgggtcctgaagcac
tcagacctggagaagcaggacaacagctggaaagagacgcgcagtgagaagatgcatgac
aaggaggcggtatctgaagctgagcttgggggaaccggcttaaagaggaccaaatctgtt
tcctccatgtctgagtttgaaagtttgcttgactgctccccctaccttgctggcggagat
gcccggggcaagaaactgcccaacaaccctgcctttacctttgtgagtactgagccggtg
gatccagagaaagataccaaggaaaaggcagggctaacgccccaggactccaatcgtctg
ggtgcactggcctgccaggaccctgcagggaggcacatgcagcgcagctacactgctccg
gacaagaccggcatccgagtctactacagtcccccggtggcccggcgcctgggggtccct
gtggtccatgacaaggagggcaaaattctcattgagcccggcttcctctttaccacagcc
aagcccaaagaatcagccgaggccgacgggctggctgagagctcctacagccggtggctg
tgcaacttctcccggcagcgcctggatgtggggtcggggggcagcccctcaccagccgga
ccggccttccctgcggccctgcatgactttgagatgtcaggcaacatgagcgatgacatg
aaggagatcaccaactgcgtgcggcaggccatgcgctcaggctcgctggagaggaaagtc
aaaagcacatccagccagacggtgggcctggccagcgtgggcacacagaccatccgcatg
gtcagcgtgggcctgcaaacggacccgccccgcagcagcctccacagcaagagctggtca
ccccgtagctcctcacttgtgtcggtgcgcagcaagcagatctcctcctccctggacaag
gtccattcccgcatcgagcggccctgctgctcgcccaagtatggctcgccaaagctccag
aggcgctcggtgtccaagctggacagcaccaaggaccgcagcctctggaacctgcaccag
ggcaagcagaacggctcagcctgggctcgctccaccaccacacgggacagcccggtgctg
aggaacatcaacgatgggctgtccagcctcttcagtgtggtggagcactcagggagcaca
gaatccgtctggaaactgggcatgtccgagacccgggccaagcccgaggcacccaagtat
ggcatcgtgcaggagttcttccgcaacgtgtgtggccgggcacccagccccacggcgact
gcgggagaggaaggcgccaagaagcctgagcccctctcccccgccagttaccatcagcca
gagggcgtggccaggatcctgagcaagaaggtggccaagtcaggcagtggcgaggaggcc
agagcctcgatgcttccccaggtggggaaggacggtgtgccccgagagggagacggcacc
tccgttcttcccagtgaggacgctgtgtgtgactgcagtgcccagtctcttgcctcctgc
tttgccaggccatcccgctctgccatccgacactctccttccaagtgccggctgcatccc
tctgagtctggctggggtgtggaggaaagggtggcccctgccagtgagtga
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integrated database retrieval system