Sciurus carolinensis (gray squirrel): 124976183
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Entry
124976183 CDS
T08117
Name
(RefSeq) atlastin-1 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124976183
Membrane trafficking [BR:
ncar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124976183
Autophagy
ER-phagy
ER-phagy recepters
124976183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
124976183
NCBI-ProteinID:
XP_047395001
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All DBs
Position
2:151297819..151360816
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AA seq
558 aa
AA seq
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MAKNRRDRNSWGGFSEKTCDWSSEEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSE
AVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWLGDYNEPLTGFSWRGGSERET
TGIQIWSEVFLINKVDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQ
NVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRL
KVSGNQHEELQNVRKHIHSCFTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKIL
IPWLLSPESLDIKEINGNKITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAV
ATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRGVKKMGGEEFSRRYLQQ
LESEIDELYIQYIKHNDSKNIFHAARTPATLFVVIFITYVIAGVTGFIGLDIIASLCNMI
MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGSTNEALYKLYSAAATHRHLYHQ
AFPAPKSETTEQSEKKKI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaccgcagggacagaaacagttggggtggattttcagagaagacatgtgac
tggagttcagaagaggaggagccagtgaaaaaggcaggacctgtccaagtcctcattgtc
aaagatgaccattcttttgagttagatgaaaccgcactaaatcggatccttctctctgag
gctgtcagggacaaggaagtagttgcggtatctgttgctggagcctttagaaaaggaaag
tcatttctgatggacttcatgttgcgatacatgtacaaccaggaatcagttgattggctt
ggagattacaatgaaccattgactggattttcatggagaggtgggtctgaacgagaaacc
acaggaatccagatatggagtgaagttttcctaatcaataaagttgatggtaaaaaggtt
gcagtgttattgatggatactcagggaacctttgatagtcagtcaactttgagagattcg
gccacagtatttgcccttagcacaatgatcagctctatacaggtatataatttatcccaa
aatgtccaggaagatgatcttcagcaccttcagcttttcactgagtatggcagactggca
atggaggaaacattcctaaagccatttcagagtctgatatttctggttcgagactggagt
ttcccatatgaattttcatatggagcagatggtggtgcaaaattcttggaaaaacgcctc
aaggtctcagggaaccagcatgaagaactgcagaatgttcgaaagcacatccattcctgt
ttcaccaatatttcctgttttctgctacctcaccctggcttgaaagtagctaccaatcca
aactttgatggaaaactgaaagaaatagatgacgaattcatcaaaaacttgaaaatactg
attccttggctacttagtcctgagagcctagatattaaagagatcaatgggaataaaatc
acctgccgaggtctggtggagtacttcaaggcttatataaagatctatcaaggtgaagaa
ttaccacatcccaaatccatgttacaggccacagctgaagctaacaatttagcagctgtt
gcaactgccaaggacacatacaataaaaagatggaagagatatgtggtggtgacaaacca
tttctggcccctaatgacctgcagaccaagcatctgcagcttaaagaagaatctgtgaag
ctgttccgaggagtgaagaagatgggtggggaagaatttagccggcgttacttgcagcag
ttggagagtgaaatagatgaactttacattcagtatattaagcacaatgatagcaaaaac
atcttccatgcagcacgcaccccagccacactgtttgttgtcatctttatcacatatgtg
attgctggtgtgactggattcattggtttggacatcatagcaagcctatgcaatatgata
atgggactgaccctaatcaccttatgtacctgggcatatatccggtactctggagaatac
cgagaactgggtgctgtaatagaccaggtggctgcggctttgtgggaccagggaagtaca
aatgaggctttatacaagctttacagtgcagcagcaacccacagacatctgtatcatcaa
gctttccctgcaccaaagtcagaaactactgaacaatcagaaaagaagaaaatttaa
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