Sciurus carolinensis (gray squirrel): 124976197
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Entry
124976197 CDS
T08117
Name
(RefSeq) SNW domain-containing protein 1 isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
ncar04330
Notch signaling pathway
ncar05169
Epstein-Barr virus infection
ncar05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124976197
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124976197
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
124976197
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
124976197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124976197
Spliceosome [BR:
ncar03041
]
Complex B
Other components
Prp19-related factors
124976197
Complex C
124976197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
Motif
Other DBs
NCBI-GeneID:
124976197
NCBI-ProteinID:
XP_047395040
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All DBs
Position
2:complement(175595677..175630207)
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AA seq
552 aa
AA seq
DB search
MKNFWKSGIGNEHPGTIPQICFLPAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPY
GYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKMSNALAIQVDPEGKIKYDAIARQ
GQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMP
VRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPS
PPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENF
AKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEK
EDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRNSNE
VQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYGDDLE
TRIKTNRFVPDKEFSGSDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPK
EHEHEGKKRRKE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttttggaaaagtggaattggaaatgaacacccaggaacaataccacagata
tgctttttacctgcacctactcagctgtctcaagaccagcttgaggctgaagaaaaagca
agatctcagcgatcacggcagacctcactggtctcctcccgaagagaacccccaccatac
ggataccgaaaaggctggatacctcggttgttagaggattttggagatggaggtgccttt
ccagagatccatgtggcccaatatccactggatatgggacgaaagaaaaaaatgtcaaat
gcactggccattcaggtggatcctgaaggaaaaattaagtatgatgcaattgctcgacaa
ggacagtcaaaagacaaggtcatttatagcaaatatactgacctggttccaaaagaggtt
atgaatgcagatgatccagacctacaaagacctgatgaagaagctattaaagagataaca
gaaaagacaagggtagccttagagaaatctgtatcacagaaggttgccgcagccatgcca
gttcgagcagctgataaactggctcctgctcagtacatccgatacacaccatctcagcaa
ggagtagctttcaactctggagctaaacagagggttattcgaatggtagaaatgcagaaa
gatccaatggaacctccaaggttcaagattaataagaaaattcccaggggaccaccttct
cctcctgcacctgtcatgcattctcctagtcgaaagatgactgtaaaggaacagcaagag
tggaagattcctccttgtatttccaactggaaaaacgcaaagggttatacaattccatta
gacaaacgtctagctgctgatggaagaggacttcagacagtacacataaatgagaatttt
gccaaactggctgaagcactctacattgctgatcggaaggcacgggaagctgtggaaatg
cgtgcccaagtagagcgaaaaatggctcagaaagaaaaggagaaacatgaagagaaactt
agagagatggcccaaaaagccagagagaggagagcggggatcaaaacccatgtggaaaaa
gaggatggggaggcacgtgagagagatgaaatccgtcatgatagacgaaaagaaagacag
catgaccggaatctttctagggcagctcctgataagaggtcaaagctgcagagaaatgaa
aatcgagatatcagtgaagtcattgctcttggtgtgcccaatcctcggaattccaatgaa
gtacaatatgaccaaaggcttttcaaccaatccaagggtatggacagtggattcgcaggt
ggagaagatgaaatttacaatgtttatgatcaagcctggagaggtggtaaagatatggcc
cagagtatttataggcccagtaaaaacctggacaaagacatgtatggtgatgacctagaa
accagaataaagaccaacagatttgttcccgacaaggagttttccggttcagaccgtaga
cagagaggccgagaaggaccagttcagtttgaagaagatccttttggtttggacaaattt
ttggaagaagccaaacagcatggtggctctaaaagaccctcagatagcagccgccccaag
gaacatgaacatgaaggcaagaagagaaggaaggaatag
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