Sciurus carolinensis (gray squirrel): 124976222
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Entry
124976222 CDS
T08117
Name
(RefSeq) proteasome subunit alpha type-7 isoform X1
KO
K02731
20S proteasome subunit alpha 4 [EC:
3.4.25.1
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03050
Proteasome
ncar05010
Alzheimer disease
ncar05012
Parkinson disease
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
ncar05017
Spinocerebellar ataxia
ncar05020
Prion disease
ncar05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124976222
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
124976222
05012 Parkinson disease
124976222
05014 Amyotrophic lateral sclerosis
124976222
05016 Huntington disease
124976222
05017 Spinocerebellar ataxia
124976222
05020 Prion disease
124976222
05022 Pathways of neurodegeneration - multiple diseases
124976222
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124976222
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124976222
03051 Proteasome [BR:
ncar03051
]
124976222
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
124976222
Peptidases and inhibitors [BR:
ncar01002
]
Threonine peptidases
Family T1: proteasome family
124976222
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124976222
Proteasome [BR:
ncar03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
124976222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
RecA_C
Motif
Other DBs
NCBI-GeneID:
124976222
NCBI-ProteinID:
XP_047395096
LinkDB
All DBs
Position
2:1644798..1650385
Genome browser
AA seq
248 aa
AA seq
DB search
MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVR
KICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQ
SNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTEEA
IETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEKYVAEIEKEKEENE
KKKQKKAS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggag
tacgcgcaggaggccgtcaagaagggctccactgcggttggtgttcgaggaagggacatt
gttgttcttggtgtggaaaagaaatcagtggccaaactacaagatgaaagaacagtgcgc
aagatctgtgctttggatgacaacgtctgcatggcctttgcgggcctcactgcagatgca
aggatagttatcaatagggcccgggtagagtgccagagccaccggctaactgtggaggac
cctgtcaccgtggagtatatcacccgctacatcgccagtctgaagcagcgttatacacag
agcaatgggcgcaggccgtttggcatctctgccctcattgtgggttttgactttgatggc
actcccagactctatcagaccgacccatcgggcacataccatgcctggaaggccaatgcc
ataggccggggtgccaagtcagtgcgtgagttcctggagaagaactatactgaagaagcc
attgagacagatgacctgaccatcaagctggtgatcaaggccctcctggaagtggtccag
tcaggtggcaaaaacattgaacttgctgtcatgaggcgagatcagcccctcaagatccta
aatcctgaagaaattgagaaatatgttgctgagattgaaaaagaaaaagaagaaaatgaa
aagaagaaacaaaagaaagcatcgtga
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integrated database retrieval system
