Sciurus carolinensis (gray squirrel): 124976226
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Entry
124976226 CDS
T08117
Name
(RefSeq) rho GTPase-activating protein 5 isoform X1
KO
K13709
Rho GTPase-activating protein 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04510
Focal adhesion
ncar04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124976226
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
124976226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124976226
Membrane trafficking [BR:
ncar04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124976226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
FF_RHG35_4th
Ras
FF
GTP_EFTU
NOG1
Roc
U5_2-snRNA_bdg
Motif
Other DBs
NCBI-GeneID:
124976226
NCBI-ProteinID:
XP_047395100
LinkDB
All DBs
Position
2:133846380..133924167
Genome browser
AA seq
1503 aa
AA seq
DB search
MMAKNKEPRPPSYTISVVGLSGTEKDKGNCGVGKSCLCNRFVRSKADEYYPEHTSVLSTI
DFGGRVVNNDHFLYWGDITQNGEDGVECKIHVIEQTEFIDDQTFLPHRSTNLQPYIKRAA
ASKLQSAEKLMYICTDQLGLEQDFEQKQMPEGKLNVDGFLLCIDVSQGCNRKFDDQLKFV
NNLFVQLSKSKKPVIIAATKCDECVDHYLREVQAFASNKKNLLVVETSARFNVNIETCFT
ALVQMLDKTRGKPKIIPYLDAYKTQRQLVVTATDKFEKLVQTVRDYHATWKTVSNKLKNH
PDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYISTLPRAFNTLLPNLEEIEHLN
WSEALKLMEKRADFQLCFVVLEKTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQH
LISEKRRVEMKEKFKKTLEKIHFISPGQPWEEVMCFVMEDEAFKYITEADSKEVYGRHQR
EIVEKAKEEFQEMLFEHSELFYDLDLNATPSSDKMSEIHTVLSEEPRYKALQKLAPDRES
LLLKHIGFVYHPTKETCLSGQNCTDIKVEQLLASSLLQLDHGRLRLYHDSTNIDKVNLFI
LGKDGLAQELANEIRTQSTDDEYALDGKIYELDLRPVDAKSPYILSQLWTAAFKPHGCFC
VFNSIESLSFIGEFIGKIRTEASQIRKDKYMANLPFTLILANQRDSISKNLPILRHQGQQ
LANKLQCPFVDVPAGTYPRKFNETQIKQALRGVLESVKHNLDVVSPVPTNKDVSEADLRI
VMCAMCGDPFSVDLILSPFLDSHSCSAAQAGQSNSLMLDKIIGEKRRRIQITILSYHSSI
GVRKDELVHGYILVYSAKRKASMGMLRAFLSEVQDTIPVQLVAVTDSQADFFENEAIKEL
MTEGEHIATEITAKFTALYSLSQYHRQTEVFTLFFSDVLEKKNMIENSYLSDNTRESTHQ
SEDVFLPSPRDCFPYNNYPDSDDDTEAPPPYSPIGDDVQLLPTPSDRSRYRLDLEGNEYP
VHSTPNCHDHERNHKVPPPIKPKPVVPKTNVKKLDPNLLKTIEAGIGKNPRKQTSRVPLA
HPEDMDSSDNYAEPIDTIFKQKGYSDEIYVVPDDSQNRIIKIRNSFVNNTQGDEENGFSD
RTSKGHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFTTSKTKRKGRHRGSEEDP
LLSPVETWKGGIDNPAITSDQEVDEKKMKKKTHKVKEDKKQKKKTKNFNPPTRRNWESNY
FGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNIS
LVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKAERLHALKEIVKKFHP
VNYDVFRYVITHLNRVSQQNKINLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVE
TFIQQCQFFFYNGEIVDTGNTVAPPPPSNPGQLVESMVPLQLPPPLQPQLIQPQLQTDPL
GII
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaaaaacaaagagcctcgtcccccatcctatactatcagtgtagttggactc
tctggaactgaaaaagacaaaggtaactgtggagttggaaagtcttgtttgtgcaataga
tttgtacgttcaaaagcagatgaatattatccagagcatacttctgtgcttagcaccatt
gactttggaggacgagtagtaaacaatgatcactttttatactggggtgacataacacag
aatggtgaagatggagtagaatgcaaaattcatgtcattgaacaaacagagttcattgat
gaccagactttcttgcctcatcggagtacgaatttgcaaccatatataaaacgtgcagct
gcctctaaattgcagtcagcagaaaaactaatgtacatttgcactgatcaactaggcttg
gagcaagactttgagcagaagcagatgcctgaagggaagctcaatgtggatggattttta
ttgtgtatcgatgtaagtcagggatgcaatcggaagtttgatgatcaacttaaatttgtg
aataacctttttgtccagctgtcaaaatcaaaaaaacctgtaataatagcagcaactaaa
tgtgatgaatgcgtggatcattatcttagagaagttcaggcatttgcttcaaacaaaaag
aaccttcttgtagtagaaacatcagcacgatttaatgtcaacattgagacatgtttcact
gcactagtacaaatgttggataaaactcgtggcaagcctaaaattattccctatctggat
gcttataaaacacagagacaacttgttgtcacagcaacagataagtttgaaaaacttgtg
cagactgtgagagattatcatgcaacttggaaaactgttagtaataaattaaaaaatcat
cctgattatgaagaatacatcaacttagagggaacaagaaaggccagaaatacattctca
aaacatatagaacaacttaagcaggaacatataagaaaaagaagagaagaatatataagt
accttaccaagagcttttaacactcttttgccaaatctagaagagattgaacatttgaac
tggtcagaagctttgaagttaatggaaaagagagcagatttccagttatgttttgtggtg
ctagaaaaaacaccttgggatgaaactgaccatatagacaaaattaatgatagacgaatc
ccatttgacctcctaagcactttagaagctgaaaaagtctatcaaaaccatgtacagcat
ctaatatcagagaaaaggagagtagaaatgaaggaaaaattcaaaaagactttggaaaaa
attcatttcatttcacctgggcagccatgggaggaagttatgtgctttgttatggaggat
gaagccttcaaatatatcactgaggctgatagtaaggaggtatatggtaggcatcagcga
gagatagttgaaaaagccaaagaagagtttcaggaaatgctttttgagcattctgaactt
ttttatgatttagatcttaacgcaacaccaagttcggataaaatgagtgaaattcataca
gttctgagtgaagaacctagatataaagctttacagaaacttgcacctgatagggaatct
cttctactcaaacatatcggattcgtttatcatcccactaaagaaacatgccttagtggc
caaaattgtacagacattaaagtggaacagttacttgccagtagtcttttgcagttggat
catggccgcttacggttatatcatgatagtaccaatatagataaagttaaccttttcatt
ttggggaaagatggccttgcccaagaattagcaaatgagataaggacacagtctactgat
gatgagtatgccttagatggaaaaatttatgaacttgatcttcggccggttgatgccaaa
tcgccttatattttgagtcaattatggactgctgcctttaaaccacatgggtgcttctgt
gtatttaattccattgagtcactgagttttattggggaatttattggaaaaataagaact
gaagcttcccagatcagaaaagataaatatatggctaatcttccatttacattaattctg
gctaatcagagagattccattagtaagaatctacccattctcaggcaccaggggcagcaa
ctggcaaacaaattacagtgtccttttgtggatgtgcctgcaggtacatatcctcgtaaa
tttaatgaaacccaaataaagcaagctctaaggggagtactggaatcagttaaacacaat
ttagatgtggtgagcccagttcccaccaataaggatgtatcagaagctgacttgagaatt
gtcatgtgtgccatgtgtggtgatccatttagtgtggatcttattctgtcacccttcctt
gattctcattcttgcagtgctgctcaagctggacaaagtaattctttaatgcttgacaaa
attattggtgaaaaaaggagacgaatacagatcacaatattatcatatcactcttcaatt
ggagtaaggaaggatgaactggttcatggatatatattagtttactctgctaaacggaaa
gcatcaatgggaatgcttcgagcatttctgtcagaagttcaagataccattcctgtacaa
ctggtggcagttactgacagccaagcagatttttttgaaaatgaggctattaaggagtta
atgactgaaggagaacacattgcaactgagatcactgctaaatttacagctttgtattct
ttatctcagtatcatcggcaaactgaggtctttactctgttttttagtgatgttctagag
aaaaaaaatatgatagaaaattcttacttgtctgataatacaagagaatcaactcatcaa
agtgaagatgtttttctgccatctcccagagactgttttccttataacaactatcctgat
tcagatgatgatacagaagcaccacctccttatagtccaattggggatgatgtacagttg
cttccaacacctagtgaccgttccagatacagattagatttagaaggaaatgaataccct
gttcatagcactccaaactgtcatgatcatgaacgcaaccataaagtgcctccacctatt
aaacctaaacctgttgtacctaagacaaatgtgaaaaaattggatccaaaccttttaaaa
acaattgaagctggtattggtaaaaatccaagaaaacagacttcccgggtgcctttggca
catcctgaagatatggattcttcagataactacgcagaacccattgacacaattttcaaa
cagaagggctattctgatgagatttatgttgtcccagatgacagtcagaatcggattatt
aaaattcgaaactcatttgtaaataacacccaaggagatgaagaaaatggattttccgat
agaacctcaaaaggtcatggggaacggaggccttctaaatacaaatataaatctaaaacc
ttgtttagtaaagccaagtcatactacagaagaacacattcagatgcaagtgatgatgag
gctttcactacttcaaaaacaaaaagaaaaggaagacatcgtggaagtgaagaagatcca
cttctttctcctgttgaaacttggaaaggtggtattgataatcctgcaatcacttctgac
caggaggttgatgaaaagaagatgaagaagaaaacccacaaagtaaaagaagataaaaag
cagaaaaagaaaactaagaacttcaatccaccaacgcgtagaaattgggaaagtaattac
tttgggatgcccctccaggatctggttacagctgagaagcccataccactgtttgttgaa
aaatgtgtggaatttattgaagatacagggttatgtactgaaggactttaccgtgttagc
ggaaacaaaactgatcaagacaacattcaaaagcagtttgatcaagatcataatatcagt
ctagtctcaatggaagtaacagtaaatgctgtagctggagctcttaaagctttttttgca
gatcttccagatcctttaattccatattcccttcatccagagctattggaagcagcaaaa
atcccagataaagcagaacgtcttcatgccttgaaagaaattgttaagaaatttcatcct
gtaaactatgatgtattcagatatgtaataacacatctaaacagggttagtcaacaaaat
aaaatcaacctaatgacagcagacaacttatccatctgtttttggccaaccctgatgaga
cctgattttgaaaatcgagagtttctgtctaccactaagatccatcaatctgttgttgaa
acattcattcagcagtgtcaatttttcttttacaatggagaaattgtagatactgggaac
actgtggctcctccaccaccttcaaacccaggacaattggtggaatcaatggtacccctt
cagttaccaccaccattgcaacctcagctgatacaaccacaattacagacggatcctctt
ggtattatataa
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integrated database retrieval system
