Sciurus carolinensis (gray squirrel): 124976233
Help
Entry
124976233 CDS
T08117
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124976233
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124976233
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
124976233
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
BBSome
124976233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_11
TPR_16
TPR_14
TPR_17
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_9
ARM_TT21_2nd
TPR_Slam
TPR_7
ARM_TT21_4th
TPR_15
PknG_TPR
Wzy_C_2
NatA_aux_su
ARM_TT21_N
ARM_TT21_C
TPR_MalT
HrpB1_HrpK
Mu-like_Pro
Motif
Other DBs
NCBI-GeneID:
124976233
NCBI-ProteinID:
XP_047395130
LinkDB
All DBs
Position
2:complement(83245209..83294583)
Genome browser
AA seq
520 aa
AA seq
DB search
MAEEALESKTQLSATVESQKPRQKKVVICSLVPDFPILEKQNWLIHLHYIQKDYEACKAI
IKEQLQETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAILNPQCADNLKQVARSLFLL
GKHKAATEVYNEAAKLNQKDWEICHNLGVCYIYLKQFNKAQDQLHNALQLNRHDLTYTML
GKIHLLEGDLDKAIEIYKKAVEFSPENTELLTTLGLLYLQLGVYQKAFEHLGNALTYDPT
NYKAILAAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISCLK
RANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDV
ENAKRAYAEAVRLDKCNPLVNLNYAVLLYNQGEKRDALAQYQEMEKKVNFLKDNSSLEFD
PEMVEMAQKLGAALQVGEALVWTKPIKDPKSKHRISSTGKPAGFQQPLGSNQALGQAMSS
AVAYRKLPAGAGGTSQLTKPPSLPLEPEPTVEASEQTREK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaggcattggagtcgaaaactcaattgtctgcaactgttgaatctcaaaaa
cccaggcagaaaaaagttgtaatatgctctctagtcccagactttcctattttggagaag
cagaactggttgatacatctccactatatccagaaggattatgaagcatgcaaggccatt
atcaaagaacagcttcaggagactcaggggttgtgtgaatatgctatctatgtccaagca
ttgatatttcgcctagaaggaaatattcaagaatccctagaactctttcagacctgtgct
attcttaaccctcagtgtgctgataacctcaagcaagtggccagatctttatttcttttg
ggaaaacataaagctgccactgaagtatataatgaagcagctaaacttaaccagaaagat
tgggaaatctgccataacctaggagtttgctacatttatctgaagcagttcaacaaggca
caagaccagctgcacaatgcccttcaacttaacagacatgatctgacttatacaatgctg
gggaagattcacttgctggagggagacttggacaaagccatagaaatctacaagaaagcc
gtggagttctcaccagaaaacacagaacttcttacaactttagggttgctgtacttacag
ctcggtgtttaccagaaggcatttgaacatcttggaaatgcactgacttatgaccctacc
aactacaaggccatcttggcagcaggcagcatgatgcagacccatggggactttgatgtt
gctctcacgaaatacagagttgtagcttgtgctgttccagaaagtcctccactctggaat
aatattggaatgtgtttctttggcaagaagaaatatgtggcagctatcagctgcctgaaa
agagccaactacttggcaccctttgattggaagatcctgtataatttgggccttgtccat
ttgaccatgcagcagtatgcatcagctttccatttcctcagtgcagccatcaacttccag
ccaaagatgggggagctctacatgctcttggctgtggctctgaccaatctggaagatgta
gagaatgccaagagagcctacgcagaagcagttcgcctggataagtgtaaccctttagta
aacctgaactatgctgtgctgctgtacaaccagggtgagaagagggatgccctggcacag
tatcaggagatggaaaagaaagtcaactttctcaaggataatagctctctggaatttgac
cctgagatggtagagatggctcagaagctgggagctgctctccaggttggggaggcactg
gtctggactaaacctattaaagatcccaaatcaaagcaccgaatcagttcaactggaaaa
cctgctggtttccagcaacccctgggctctaatcaagctcttggacaggcaatgtcttca
gcagttgcatataggaagctccctgcaggtgctggaggaacatcccagctcacaaagcca
ccatctcttcctctggaaccagaacccactgtggaagcatcagagcaaacgagagaaaaa
taa
DBGET
integrated database retrieval system
