Sciurus carolinensis (gray squirrel): 124976247 Help Entry 124976247         CDS       T08117                                  Name (RefSeq) collagen alpha-3(IX) chain   KO K08131   collagen type IX alpha Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04151   PI3K-Akt signaling pathway ncar04510   Focal adhesion ncar04512   ECM-receptor interaction ncar04820   Cytoskeleton in muscle cells ncar04974   Protein digestion and absorption ncar05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:ncar00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     124976247   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124976247  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     124976247   09142 Cell motility    04820 Cytoskeleton in muscle cells     124976247  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     124976247  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     124976247  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:ncar00535]     124976247 Proteoglycans [BR:ncar00535]  Extracellular matrix (ECM) proteoglycans   Others    124976247 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  124976247 NCBI-ProteinID:  XP_047395158 LinkDB All DBs Position 2:complement(1123811..1145200) Genome browser AA seq 680 aa AA seqDB search MARAPAVALLLLGQLLVATAAQKAGPRGPPGPQGPPGKPGKDGIDGEAGPPGLPGSPGPK GNPGKPGKPGEAGLPGLPGVDGLTGRDGPSGPKGAPGERGSLGPPGPPGLGGKGLPGPPG EAGVSGLPGGIGLRGAPGPSGLPGLPGPPGPPGPPGHPGVLPEGAADLQCPAICPPGPPG PPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGIPGPVGLQGPRGSPGLPGPLGPPG DRGPIGFRGPPGVPGAPGKVGDRGERGPEGFRGPKGDFGRPGPKGIPGVAGPGGEPGMPG KDGRNGVPGLDGEKGEAGRSGAPGEKGPNGLPGLPGRTGSKGEKGELGRAGELGEAGPSG EPGVPGDVGVPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGRKGNMGDPGLPGPQGLRG DVGDRGPRGATGSKGDQGIAGSDGLPGDRGELGPSGPVGPKGEAGDRGEPGPKGIQGPNG TSGVQGVPGPPGPLGLQGVQGVPGITGKPGVPGKEASEQRIRELCGGIISEQIAQLAAHL RKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGSQGDRGDK GAAGAGLDGPAGDQGLQGPQGVPGISKDGRDGAHGEPGLPGDPGLPGAVGAQGTPGICDT SACQGAMLGGGGEKSGARSS NT seq 2043 nt NT seq  +upstreamnt  +downstreamnt atggcccgagcgcccgccgtggccctgctcctgctggggcagctcctggtagccaccgcg gcgcagaaagcgggacctcgaggccctcctggccctcaagggccacctggaaagccgggc aaggatggcattgatggagaagctggtcctccgggtctgcctgggtctccgggacctaaa ggcaacccaggcaagccagggaaaccaggagaggcaggtctgccgggactgcctggtgtg gacggtctgactgggcgggacggaccctctggacccaaaggtgcccctggagaacgggga agtctaggacctccaggaccgcctgggctggggggcaaaggtctccctggaccccctgga gaggctggagtgagcggcctcccaggtggcattggcctccgtggtgccccgggaccctct ggactcccaggcctgcccggccccccaggacctcccggacctcccggacaccctggagtc ctccctgaaggtgctgctgacctgcagtgccctgccatctgcccgccaggccccccgggt cccccaggaatgccagggttcaaggggcccacaggctacaaaggagaacagggagaagtc ggcaaggatggtgagaagggcgaccctggcccccctgggcctgctggcatcccaggcccc gtggggctccagggtccccgaggatcgccaggacttccagggccactcggaccccctggg gaccggggtcccattgggttccgaggcccccccggggttccgggagctcctgggaaagtg ggtgacagaggtgagaggggcccagaaggtttccgtggccccaagggtgactttggcaga cctggtcccaaagggatccccggagtggctgggccaggtggcgagccgggcatgccaggc aaggacggccggaatggcgtgccaggactggacggcgagaagggggaggctggtcgcagt ggtgccccaggagagaagggtcccaacgggctgccgggcctccctggacgcacaggatcc aaaggcgagaagggagaactgggtagagctggggaactgggcgaggccggcccctcggga gagccaggagtccctggagatgttggcgttcctggggagcgcggtgaggctggtcacagg ggctcagcgggggcccttggcccacaaggccctcctggagcccctggtgtccgaggcttc cagggccggaagggcaacatgggagaccccggccttccaggtccccagggtctccgtggc gatgtgggggaccggggcccaagaggtgccaccggctctaagggagaccagggcattgca ggttccgatggccttcctggggacagaggcgagctgggtcccagtggccccgttggacca aaaggagaggctggtgatcgaggggagccgggccccaaaggcatccagggacccaatggc acgagtggagtccagggtgtccctgggcccccggggcccctaggcctccagggcgtgcag ggcgtccctggcatcaccgggaaacctggtgttccggggaaagaagccagcgagcaacgc atcagagagctgtgtgggggaattataagtgagcaaattgcacagttagctgcgcacctg aggaagcccttagcgccaggctccatcgggcgccctggtccagctggccccccggggccc ccaggccccccaggctccatcggccaccctggtgctcgaggaccccctggatatcgtggt cccaccggggagctgggagaccctggacccagaggaagccagggtgacagaggagacaag ggtgcagcaggtgcagggctggacgggcctgctggagaccaggggctccaagggccacag ggtgtccctggcatcagcaaagacggccgagatggtgctcatggcgagcctggacttcct ggtgatcctggccttcctggtgcagttggggctcaggggactccagggatctgtgacacc tcagcctgtcaaggagctatgctcggaggaggtggggaaaagtcaggcgctcggagctcg tga

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