Sciurus carolinensis (gray squirrel): 124976725 Help Entry 124976725         CDS       T08117                                  Name (RefSeq) collagen alpha-1(XX) chain-like   KO K24357   collagen type XX alpha Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:ncar00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     124976725 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA fn3 Collagen VWA_2 Ig_DSCAM-DSCAML_C vWA_SIBA-E Big_10 Motif Other DBs NCBI-GeneID:  124976725 NCBI-ProteinID:  XP_047395544 LinkDB All DBs Position 2:complement(771126..804396) Genome browser AA seq 1393 aa AA seqDB search MWEIKGQSFSSCRLCTMNCRGHSHLRFCLWLWLGTTLAHGLGQASGHLRLTVLPEDRLQM KWRESEGSGLGYLVQVKPMAGDLEQEVMLTTKIPKATVGGLSPSKGYTLQIFKLTGSRPV LLMRREFVIEDLKSNSLGRSSWRPPGAALESTQSHVGAPDPEQASDSRVTFTPSQDPPIL GVPGVDQQQLKQSWSWGPRVQDPAQWPRDLERQSHAVPLGGRREKLAGPQFRCTPPTPTD MVFLVDGSWSIGRGHFQQVKEFLASVISPFEIGPEKVQVGLTQYSGDPRTEWDLNSFRSS GEVLAAVRGLRYKGGNTFTGLALTHVLEQNLKPSAGLRPEAAKVVVLVTDGKSQDDVHTA AGVLKDLDIDVFTVGVKNADEAELKVLASQPLDITMHNVLDFPQLATLAGLLSRLICQKV QGRSPSRAPVTPEDAPALDPLPGSSSLVLTQVTSSSVHVSWTPTPQLPLKYLIVWQLSRG GTPQELAVGGPVSSVQLCNLTSSSEYLVSVLPVYKDRVGQRLQGLVTTAPLPPPRALTLV RATPRTLHLAWQSSAGATQYLVRCLSASPGGKEEEREVQVGQPEVLLDGLEPGRDYQILV QSLRGPEASQAQSIQTRTSALAPPRHLGFSDVSHDSARVSWEGTQRPVRLVRVSYVSSDG GHSGQTEAPGNATWTALGPLSSSTTYTVRITYLYLGGGSSTLTGHVTTRKVPSPSQLSVT ELPGDAVRLVWAAAASSGVLVYQIKWTPLGEGQAHEISVPGTLSTAVLPDLGRHTEYEIT ILAYYRDGARSDPVSLRYSPSAASRSPPSSLALSSETPNSLQVSWTSPSGHVLHYRLTYV PASGSGPEQSISVPGSRSHTVLPDLLAATKYKVLVSAVYRAGESVAVSASGWTAACPALH PNSSLPGFDLMAAFGLVEKEHASVRGVAMEPSALGMTPTFTLFKDAQLTRRTRDIHPVAL PPEHTIVFLVRLFPETPREAFALWQMTAEDFQPVLGVLLDAGRGSLTYFNHDPRAALQKA TFDLQEVKKIFFGSFHKVHVAVGHSKVRLYVDCQKVAERPIGEAGSPTSGFVMLGRLAKA RGPRSSSATFQLQMLQIVCSDTWVDEDRCCELPALRDGETCPAFPSACTCSSETPGPPGP QGPPGLPGRNGSPGEQGLPGPRGEPGPPGQTGPEGPGGQQGSPGTQGHTVQGPVGPPGSK GEKGDQGLPGLQGHPGQQGTPGRVGLQGPKGTRGLEGPAGRPGPPGPRGFQGSAGARGTN GERGPPGAVGPTGLPGPKGEQGEKGEPQSLATIFQLVSQACESVIQAHVLRLESFFHGST RPPMPILVEAVKPGGHRHPGSPGTHSKALLPGEQAHGGHHPEGRGEPSAGGQTGSTGLQG SQPPGLLEGTGRS NT seq 4182 nt NT seq  +upstreamnt  +downstreamnt atgtgggagataaagggccaaagtttctcctcctgcaggttgtgcaccatgaactgccga ggtcactcccacctccgcttctgcctctggctgtggttgggtaccacattggcacatggg ctgggacaagcgagtggccacctaaggctgactgtgctgcctgaggaccggttgcagatg aagtggagagagtcagaggggagtggcctgggctacctggtgcaggtgaagcccatggca ggggacttggagcaggaagtgatgttgactaccaagatccccaaggccaccgtggggggc ctgagcccctccaagggctacaccttgcagatcttcaagctcactggctccaggcctgtc ctgctgatgcggagggagtttgtgattgaggatctgaagagtaactccctgggcaggagc agctggagaccaccaggtgcagctctggagtctacccaatcccatgtgggagccccagac cctgagcaggcctctgattccagagtcaccttcaccccaagccaagaccctcccattctt ggagtacccggcgtggatcagcagcaacttaagcagagctggtcctggggccccagggtt caggaccctgctcagtggccccgggacctagagaggcagagccacgctgtgccccttggc ggaaggagagagaaactggctggtccccagttccgctgcacaccccccacacccactgac atggtcttcctggtggacgggtcctggagtattggccgtggccacttccagcaggtcaaa gaattcctggccagtgtcatctcaccctttgagattgggccagaaaaagttcaagtaggc ctgactcagtacagtggagacccccggaccgagtgggacctgaactccttccgcagcagt ggggaggtgctggcagccgtgcgtggcctccgctacaagggagggaacaccttcacaggc ctagccctgacccacgtgctggagcagaacctgaagccttcggctggtctccgtccagag gcagccaaagtggtggttctggtgacggatggcaagtcccaggacgacgtgcacactgct gccggtgtcctcaaggacctggacattgacgtcttcactgtgggtgtaaagaatgctgac gaggccgaactgaaggtcctggcatcccagcccctggacatcaccatgcacaacgtgctg gacttcccccagctggccaccctggctggcctactcagccgcctcatttgccagaaggtg cagggcaggagcccgagcagggccccagttactccagaagatgctccggccctggacccc ctcccagggtccagcagcctggtcctgacccaggtcacctcctccagtgtccacgtgtcc tggactccaaccccccaactgcccctcaagtatctgattgtgtggcaactgtccaggggt ggcaccccccaggagctggcggtgggagggcccgtctcctctgtgcagctttgcaacctg acctccagctctgagtacctggtctctgtgctccctgtctacaaggacagggttggtcag cgcctgcagggcctggtgaccacagcacctctacctccaccgcgggcactgaccctggtg agagcaacgcccaggactctccacctggcctggcagtcctcagcaggggccacccagtac ctggttcgatgcttatcagcctcccccgggggcaaggaggaggagagagaggtgcaggtg gggcagcctgaggtgctgctggatggcctggaaccaggcagggactaccagatcctggtg cagagcctgcgagggccagaggccagccaggcccagagcatccaaaccagaacctctgcg ctggccccaccaaggcacctgggcttctcagatgtgagccacgactcagcccgtgtgtcc tgggagggcacccagaggccagtgcgcttggtcagggtcagctacgtctccagtgatggt ggtcactcagggcagacagaggctcctgggaatgccacatggactgctctgggccccctc tcctcctctaccacctacaccgtccgcattacctacctctaccttggcggaggctcctcc acactgactggccatgtgaccacaaggaaagtgcccagcccgagccagctttcggtgaca gagctgccaggagatgcagtcaggctggtgtgggcagctgcagcctcatcgggtgtactg gtctaccagatcaagtggacacccctgggagaggggcaggcccacgagatctctgtccca ggaaccctcagcacagccgtcctgcctgacctggggaggcacacagagtacgagatcacc atcctggcctactacagggacggggcccgcagtgaccctgtgtccctccgctactccccc tctgcagcaagcaggagtcctccctccagcctggccctgtcttcagagacccccaacagc ctgcaggtcagctggacatccccaagtggccatgtcctccactaccggctcacctacgtg ccagcctcaggctctggacctgagcaatcaatctccgtgccagggtccaggagccacacc gtgctccctgacctgctggctgccaccaagtacaaggtcctggtctcagctgtctacaga gcaggggagagtgtggcagtgtctgcttcaggctggacagcagcctgccccgccctccac ccgaacagctctctcccaggatttgacctgatggcagccttcggcctggtggagaaggag catgcctctgttcgaggcgtggccatggagccctcggccctgggcatgaccccgaccttc acgctcttcaaggatgcccagctgacacgacggactcgtgacatccacccggtggccctg ccgcctgagcacaccatcgtctttctcgtgcgcctgttccctgagacgccccgcgaggcc tttgcactgtggcagatgacggccgaggacttccagcctgtccttggagttcttctggat gctggcagagggtcactgacctacttcaaccacgaccccagagctgccctgcagaaggcc acctttgacctgcaggaggtgaagaagattttcttcgggagcttccacaaggtgcatgtg gctgtgggacactccaaggtcaggctgtatgtggactgccagaaggtagctgagagaccc atcggagaggctggctcacccacctctggcttcgtcatgttagggaggctggccaaggcc aggggtccccggagcagctcagccacgttccagcttcagatgctgcagatcgtgtgtagt gacacctgggtagatgaggacaggtgttgtgagcttcctgctttgagggacggagagacg tgccctgccttcccttctgcctgcacctgctcttcagagactcctgggccccccggaccc caaggccctccaggcctccctgggaggaacggcagcccaggagagcagggcctcccaggg cccaggggagagccagggccaccaggacagacaggacctgagggccctggaggccagcag gggtcacccgggacccagggccacacagtccagggacctgtgggtccgccaggatcaaaa ggagagaagggggaccagggactaccaggcttgcagggccaccctggccagcaagggacc cctgggagagttggcctccagggaccaaagggaacaagaggactggagggacctgctgga cggcctggcccccctggcccaaggggcttccagggctcagcaggggccaggggcaccaac ggggagcgagggcctccaggagccgtggggcctacggggttgccgggccccaaaggggag caaggagagaagggtgagcctcagtccctggccaccatcttccagctggtgagccaggcc tgcgaatcagtcatccaggcacacgtgctaagactggagtccttcttccatggaagcacc aggcccccgatgcccatcttggtggaggcagtgaagccaggggggcacaggcacccaggg tcccctggcacacacagcaaagccctgcttcctggagaacaggcacatgggggacaccac cctgagggccgaggtgagccctcagctggtggtcagacgggcagcactgggctgcagggg agccagcctccaggactactggaaggcacaggacgttcctag

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