Sciurus carolinensis (gray squirrel): 124976746
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Entry
124976746 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: polycomb group protein ASXL1-like
KO
K11471
additional sex combs-like protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124976746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124976746
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
124976746
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
124976746
NCBI-ProteinID:
XP_047395610
LinkDB
All DBs
Position
2:complement(24789641..24865073)
Genome browser
AA seq
1536 aa
AA seq
DB search
MKDKQKRKKERTWAEAARLVLENYSDAPMTPKQILQVIEAEGLKEMRSGTSPLACLNAML
HSNSRGGEGLFFKLPGRISLFTLKKDALQWSRNPAAVEGEEPEDSADVESCGSNEASTVS
GENDVSLDETSSNASCSTESQSRPLPNPRDSYRASSQGNKQKKKAGVMLPRVVLTPLKXN
GAHVESASGFSGRHADGESGSPSSSSSGSLALGSAAIRGQAEVARDPAPLLRGFRKPATG
QMKRNRGEEIDFETPGSILVNTNLRALINSRTFHALPSHFQQQLLFLLPEVDRQVGTDGL
LRLSSSALNNEFFTHAAQSWRDRLADGEFTHEMQVRIRQEMEKEKKVEQWKEKFFEDYYG
QKLGLTKEESLQQNVGQEEANIKSGLRVPRESVRPQRGPATRQLDGHFKKRSRPDLRTRA
RRNLYKKQEQEQTGVAKDANSVALDIPLSTDREAKTDSAGVSSPLLPGVSSVAPGPEDPE
SPGEPVASRIQTEPDNLVRASASPDRIPSLPQDTADQEPKDQKRKSFEQAASASFPEKKP
RLEDRQSFRNTIESVHTEKPQPTKEEPKVPPIRIQLSRIKPPWVVKGQPTYQICPRIVPI
TESSCRGWTGARTLADIKARALQARGARGHHCHREAATTAIGGGGGPGGGGGGATDEGGG
RGSSSGDGGEACDHPEPRGAQSTPGECTPDLQRTQLLPPCPLNGEQTQAGTAMSRARRED
LTSLRKEEGCPLQRVPGVLTHGLEDASQPSVAPTGDQPCQALPPLSSQTPVAERLAEQPA
LQLESRTEFESGTTSWESGSEEQGATVPPETSPVQSPLGAVVFEEGADLALDNNPILKDP
ENVTPSSMPESSLAGPLQDKPCDDELGLGDSGPPVRESDGRQKALKTGAVMSDSAAAWTP
ILSSDEVVKHSEPGSRENVPPVEPQVGEDWESAAALVASSPGGLATEKGVAPPDSRASLC
IVSPQGKGGSGSDGKHVDIEKLQISVDSEALSPHSESTDTASDFEGHLTEDSEADTSEAT
VTKGSLVDKDVKHDWKQSTFLSKVNSDQSLVTRTEGMVAPQSWVSRVCAVPQKIPDSLLL
SSTEYQPRPLCLTRPGSSVEATNPLVLRLLQGNLSLEKVLPPAHSNNKPESSQLPLPKEQ
SHGDPLGTGPLRGPGENSCVVDRSSPASEGSKGLPLPESQEASIGLSQAEVTQASGAPQS
SKVVPCLDSLSPVTKPMISSGKPKEMDSKEQFSSFSFEDQKQVRECSDPHAAPSKSPGEL
TTSRAPCFSSPNVISCGPEQTGGAPGGQNSVGGQGKKLFGPRNVAATLQYPRPVDPVPLP
AEVPPVFPSRKLGPSKNSVSDGVQIAREDWGPKPPPAFVGSSKNEKTLLGGSLNANSENR
KAAGHSPLELVGHLQGMPFVMDLPFWKLPQEPGKGLAQPLEPSSIPSQLNIKQAFYGKLS
KLQLSSTSFNYSSSSPAFPRGLAGSVVQLSHKANFGASHSASLSLQMFTDSSTVESISLQ
CACSLKAMIMCQGCGAFCHDDCIGPSKLCVLCLVVR
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacagaagaggaagaaggagcgcacgtgggccgaggcggcgcgcctggta
ttagaaaactactcggatgctccaatgacaccaaaacagattctgcaggtcatagaggca
gaaggactaaaggaaatgagaagtgggacatcccctcttgcatgcctcaatgccatgtta
cattccaattcaagaggaggagaagggctgttttttaaattgcctggccgaatcagcctt
ttcacactcaagaaggatgctctgcagtggtctcgaaatccagctgcagtggagggagag
gagccagaggactcggccgatgtggagagctgtgggtctaatgaagccagcactgtgagt
ggtgaaaacgatgtgtctctggacgaaacatcttcgaatgcatcctgttctacagaatct
cagagtcggccccttcccaatcccagggacagctatagagcttcctcacagggaaacaaa
cagaagaaaaaggctggggtgatgctgcctcgggttgtgctgactcctctgaagngtaac
ggggcccacgtggaatctgcatcagggttctcgggccgccacgccgatggcgagagcggc
agcccgtccagcagcagcagcggctctctggccctgggcagcgctgctattcgtggccag
gccgaggtcgcccgggaccctgccccgctcctgagaggcttccggaagccggccacaggt
caaatgaagcgcaacagaggggaagagatagattttgagacacctgggtccattcttgtc
aacaccaacctccgtgccctgataaactctcggaccttccatgccctgccatcacacttc
cagcagcagctcctcttcctcctgcccgaagtggacagacaggtggggacagatggcctg
ttgcgcctcagcagcagcgcactcaataatgagtttttcacccacgcggctcagagctgg
cgggatcgcctggctgatggcgaatttactcatgagatgcaagtcagaatacgacaggaa
atggagaaggaaaagaaggtagaacaatggaaagaaaagttctttgaagactactatgga
cagaaattgggtttgaccaaagaggagtcattacagcagaatgtgggccaggaggaggcc
aacatcaagagtggcttgcgtgtcccaagggaatcagtgcgaccacagcgtggtccagcc
acccgacaactggatgggcattttaagaaacgctctcgaccagatctccgaaccagagcc
agaaggaatctgtacaaaaaacaggagcaagaacaaacaggtgttgctaaggatgcaaac
tctgtggcacttgatatccctctttccacggacagggaggctaagacagactcagcaggg
gtgagcagtcccctgctgccaggtgtgtcctctgtagcacctggcccagaggatcctgaa
agtccaggtgaacctgtggcttcccgaattcagactgagccagacaacttggtacgtgcc
tctgcatctccagatagaattccaagcttgcctcaggacactgcggatcaggaacccaag
gatcagaagaggaaatcctttgagcaggcagcctctgcgtcctttcccgaaaagaagccc
cggcttgaagatcgtcagtcctttcgtaacacaattgaaagtgttcacaccgaaaagcca
cagcccactaaagaggagcccaaagtcccgcccatccggattcaactttcacgtatcaaa
ccaccctgggtggttaaaggtcagcccacttaccagatatgtccccggatcgtccccatc
acagagtcctcctgccggggctggactggtgccaggaccctcgcagacattaaagcccgt
gctctgcaggcccgaggggcgagaggccaccactgccatcgagaggcggccaccactgcc
atcggaggtgggggtggcccgggtggaggtggcggcggggccaccgatgagggaggtggc
agaggcagcagcagtggtgatggtggtgaggcctgtgaccaccctgagcccaggggagcc
cagagcacccctggagaatgtacgccagatctacagcgaacacaactattgccgccttgt
cctctgaatggggagcagacccaggcaggaactgccatgtccagagccaggagagaagat
ctgacttctctcagaaaggaagaaggctgcccactgcagagggttccaggtgtcctcaca
catggtctggaagatgcctctcagccctctgttgctcccacaggggaccagccatgccag
gctttgcccccactgtcctctcaaaccccagtggcggagaggttagcagagcagcctgcc
ttgcagctggagagtagaactgagtttgagtctggcactacttcctgggaaagcgggagc
gaggagcagggggccactgttcctccagagaccagtccagtgcagtctccgctaggagct
gttgtattcgaagaaggagcagacctggctcttgacaataatcctattctgaaggatcct
gaaaatgtgactcctagttccatgcctgaatcgtcactggctggccccctgcaggacaaa
ccgtgtgacgatgaattaggacttggtgattcaggtccacctgtgagggaaagtgatggt
agacaaaaagccctgaaaactggggctgttatgtctgacagtgctgctgcttggacaccc
atcctgtcaagtgatgaggtggtgaaacattctgagccaggatccagagaaaatgttcca
cctgtggagcctcaggtcggagaagactgggagagtgctgctgcccttgttgcctcgtcg
cctgggggattggcaactgaaaagggtgtggcaccccctgacagccgtgcttcactctgc
atagtgtcacctcagggcaagggtggctctggcagcgatggcaaacatgtggacatcgag
aagctgcaaatcagtgtagactctgaagcactgagtcctcacagcgaatccacagataca
gcttctgactttgaaggtcacctcactgaggatagcgaggctgacactagtgaagccaca
gtgacaaaggggtccttggtggacaaggatgtgaaacatgattggaagcaatccactttc
ctgtccaaggtgaacagtgaccagagtctggttacaaggacagagggaatggttgctcct
cagagctgggtgtctcgagtatgtgccgttccccagaagatcccagactccttgctgctg
tccagtactgaataccagccaagacccctgtgcctgaccaggcctgggtcctcagtggag
gccaccaacccacttgtgttgcggttgctgcagggtaacttgtccctagagaaggttctt
cctccagcccacagtaacaacaagccagaatcctcacaactgccacttccaaaagagcag
agccatggtgaccccctgggcacgggacctttgcgtggtcctggagaaaacagttgtgtg
gttgacagaagcagcccagcttcagaagggtcgaagggtctgcccctgcctgagagccag
gaagcaagcattggtcttagtcaggcagaagtcactcaggcttctggagcaccccagagt
tccaaggtggtcccatgtttagattctctaagtccagtgacaaagccgatgatctcctct
gggaaaccgaaagaaatggattccaaagagcagttttcttcctttagttttgaagatcag
aagcaagtccgggagtgtagtgatccacatgctgctcccagcaagagcccgggagagctt
actacctcgagagcaccttgcttctcatctccaaatgtgatctcctgtgggccagagcag
acaggcggggccccgggtggtcagaacagtgttggaggtcaagggaagaagctctttggt
cctagaaatgtggctgcaacccttcagtaccccaggcctgtggaccccgtgccactgcct
gctgaggttcctccagtttttcccagtaggaagttggggccaagcaaaaactctgtgtct
gatggggtacagattgcaagggaagactggggtccaaagccaccccctgcctttgttggt
agcagcaagaatgaaaagactttattggggggttctcttaatgcaaattcagagaacaga
aaagctgctgggcacagtcctctggaactggtgggtcacttgcaaggaatgccctttgtc
atggacctgcccttctggaaactccctcaagagccagggaaagggctggctcagcctctg
gagccttcttccatcccttcccaactcaacatcaagcaggctttttatgggaagctttct
aaactccagctgagttccaccagctttaattactcctccagctcaccggcctttcccaga
ggcctggctggaagtgtggtgcagctgagccacaaagcgaactttggtgcgagccacagt
gcgtccctctccttgcagatgttcaccgatagcagcacagtggagagcatctcgctccag
tgtgcgtgcagcctgaaagccatgatcatgtgccaaggctgcggtgcgttctgtcatgac
gactgtatcggaccctcgaagctctgtgtattgtgccttgtggtgagataa
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integrated database retrieval system
