Sciurus carolinensis (gray squirrel): 124976779
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Entry
124976779 CDS
T08117
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124976779
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Other basic domains
RF-X
124976779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
AadA_C
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
124976779
NCBI-ProteinID:
XP_047395664
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All DBs
Position
2:97873793..97993341
Genome browser
AA seq
1461 aa
AA seq
DB search
MAEEQQQPPPQQPDAHQQLPPSAPNSGVALPALVPGLPGTEASALQHKIKNSICKTVQSK
VDCILQEVEKFTDLEKLYLYLQLPSGLSNGEKSDQNAMSSSRAQQMHAFSWIRNTLEEHP
ETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLR
KKAFVHMPTLPNLDFHKTGDGLEGAEPSGQLQNIDEEVISSACRLVCEWAQKVLSQPFDT
VLELARFLVKSHYIGTKSMAALTVMAAAPAGIKGITQPSAFIPTAESNSFQPQVKTLPSP
IDAKQQLQRKIQKKQQEQKLQSPLPGESSAKKSEGSTANGVTNLPNGNSAILSPQPIGIV
VAAVPSPIPVQRTRQLVTSPSPMSSSDGKVLPLNVQVVTQHMQSVKQAPKTPQNVPASPG
GDRSARHRYPQILPKPANSSALTIRSPTTVLFTSSPIKTAVVPASHMSSLNVVKMTTISL
TPSNSNAPLKHSASVSSATGTTEESRSIPQIKNGSVVSLQSPGSRTSGTGGTSAVEVKME
PETTSDEHPVQCQENSDGAKIPQTTPSALLGQKSNTDGAVQKPSNEGVIELKTTKVCDQR
TKCKSRCNEVLPGTSTGNNQSTITLSVATQNLTFTSTSSPSNGDSIKTDPKLCTRSPRKR
LSSTLQETQVPPVKKPIVEQPPGVSIEGQKPGSVKKDQKVPHSGKLESSTAGAQTPNKVS
ISVNSHLVENQPLGSALITSDSVLEQQQTTPSSSPDIKVKLEGNVFLLDNDSKSDGSFNT
NEWQHVTKDSEFISATCEQQQDIGVMTIPEHSDINDLEKSVWELEGMPQDAYSQQLHSQI
QESPLNQIQAQSSDQLPLQSELKEFEPSVSQANESYFPFDDELTQDSIVEELVLMEQQMS
MNNSHSYGNCLGMTLQSQSVTPGAPMSSHASSTHFYHPIHSNGTPIHTPTPTPTPTPTPT
PTPTPTSEMIAGSQSLSRESPCSRLAQTTPVDSALGSSRHTPIGTPHSNCSSSVPPSPVE
CRNPFAFTPISSSMAYHDASIVSSSPVKPMQRPMATHPDKTKLEWMNNGYSGVGNSSVSG
HGILPSYQELVEDRFRKPHAFAVPGQSYQSQSRHHDTHFGRLTPVSPVQHQGATVNNTNK
QEGFAVPAPLDNKTTNSSASNNFRCRSVSPAVHRQRNLSGSTLYPVSNIPRSNVTPFGSP
VAPEVHVFTNVHTDACANTIAQRSQSVPLTVMMQTAFPNALQKQTNSKKITNVLLSKLDS
DNDDAVRGLGMNNLPSNYTARMNLTQILETSTVFPSANSQNMIDSSTSVYEFQTPSYLTK
SNSTDQISFSPGDNQAQSEIGEQQLDFSSTVKDLLSGDSLQTNQQLVGQVASDLTNTASD
FSSDIRLSSDLSGSINDLNTLDPNLLFDPGRQQGQDDEATLEELKNDPLFQQICSESMNS
MTSSGFEWIESKDHPTVEMLG
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaacaacaacagccgccaccacagcagcctgatgcccatcagcagcttccc
cccagcgcccccaactcgggggtggctctgccagcccttgtgcccgggctgccagggaca
gaggccagcgcgctgcaacacaagatcaagaactccatctgcaaaactgtacaatctaaa
gtggactgcattttgcaagaagttgagaagtttacagacctagagaaactctacctctac
cttcagctgccttctggtctcagcaatggagagaaaagtgatcagaatgccatgtcatct
agtcgggcacagcaaatgcatgccttttcctggattcggaataccctagaagaacatcct
gagacttcactgcccaaacaggaagtctatgatgaatacaagagctactgtgacaatctt
ggttaccatccattgagtgctgctgacttcggaaagataatgaaaaatgtctttccaaac
atgaaggcacgtcgtttgggcactagaggcaaatctaaatattgttacagtggactaagg
aaaaaagcttttgttcatatgccaacactgcccaaccttgactttcacaaaactggagat
gggttggaaggagctgaaccttctgggcagcttcagaatattgatgaggaagttatatct
tctgcttgccgtcttgtttgtgagtgggcccagaaagtgttaagccagccatttgacaca
gtcttggaattagcccgcttcctcgtaaaaagtcactatataggcaccaagtcaatggca
gctttaactgtaatggcagcagcaccagcaggaattaaaggaattacccagccttctgct
tttatacctacagctgaaagtaattcctttcagccacaagtaaagactttgccatctcct
attgatgctaaacagcagttacaacggaaaatccagaaaaagcagcaagaacagaaacta
caatcccctttgccaggagaatcatcagcaaaaaaatcagaaggctcaacagccaatgga
gtgactaatcttcctaatggaaattctgcaatcctttctcctcagcccattggtatcgtt
gtggcagctgtccctagtcccattccggtccagcggaccaggcaattggtaacttcacca
agtcctatgagctcttctgacggcaaagttcttcccctcaacgtacaggtggtcactcag
cacatgcagtctgttaaacaggcaccaaagactcctcagaacgtcccagccagtcctggt
ggggatcgttctgcccgacaccgttaccctcagatcttacccaaaccagccaacagcagt
gcactcaccattcgctctccaactactgtcctctttactagcagtcccatcaaaacagct
gttgtacccgcttcacacatgagttctctaaatgtggtgaaaatgacaactatatccctc
acacccagcaacagtaatgcccctcttaaacattctgcctcagtcagtagtgctactgga
acaacagaagaatcgaggagcattccacagattaagaatggttctgttgtttctcttcag
tctcctggatccaggaccagtggcactgggggaacatctgctgtggaagtcaaaatggaa
cctgaaacaacatcagatgagcatcctgtacagtgccaagaaaactctgatggggctaaa
attccccaaacaacacctagtgctcttttggggcagaaaagtaatacagatggagcagtg
caaaaaccttcaaatgaaggtgtcattgaattaaaaacaactaaggtctgtgaccagagg
accaaatgtaaaagtcgctgtaatgaagttctgccaggcacttcaacaggcaataatcaa
agcactatcactctctcagttgctactcagaacctaactttcaccagcactagctcacca
tctaatggtgactcaataaagacagacccaaaattatgcactagaagcccaagaaaacga
ctgtcttctacattgcaagagacccaggtgcctcctgtaaagaaaccaattgtggaacag
cctcctggagttagcatagaaggtcagaaacccggcagtgttaagaaggaccaaaaggtt
ccacattcagggaaattagaaagttcaacagcaggtgctcagactcctaacaaggtatca
atcagtgtcaattcacacctggtggaaaatcaacccttgggttctgctcttattaccagt
gattcagttttggaacaacaacaaacaacaccgtcatcgtctccagatataaaagtaaaa
cttgaagggaatgtctttctcttggacaatgattcaaaatcagatggcagctttaataca
aatgaatggcaacatgtcactaaggattctgaatttatatctgccacctgtgaacaacag
caagatatcggtgtcatgacaattcctgaacactctgatatcaatgatttagagaaatct
gtttgggaattagaaggaatgccacaggacgcatatagccagcagctacatagccagata
caagaatctcctttgaatcaaatacaagcacagtcttcagatcagttacctctgcaatcc
gaactgaaggagtttgaaccttctgtttcccaagcaaatgaaagctactttccttttgat
gatgaacttactcaagatagtattgtggaagagctggtgcttatggagcagcagatgtca
atgaacaattcacattcgtatggtaactgtttgggaatgactcttcagagtcagtcagta
actccgggagctccaatgtcatctcatgcctctagcacccacttctatcatccaatccat
agcaatggcactccaatccacacacccacacccacacccactcctacaccaaccccaaca
ccaactccaacccctacatctgaaatgattgctgggtctcagagtctgtcacgggagagc
ccttgctccaggctagcccagactacacctgtggatagtgctttaggaagtagccgtcat
acacccattggtactccacattctaactgcagcagtagtgtccctcccagccctgttgaa
tgcaggaatccatttgcattcaccccaataagctctagtatggcatatcatgatgccagc
attgtctcaagcagtcctgtgaaaccgatgcaaagacccatggccacccaccctgataaa
accaagcttgaatggatgaataatgggtatagtggggttggtaactcatcagtttctggc
catggcattctcccaagttatcaggaactagtggaagatcgtttcaggaaacctcatgct
tttgctgtgcctggacagtcttatcagtctcaatccagacatcatgacactcattttggt
cgtttgactcctgtctctcctgtgcagcatcaaggtgccactgtaaataacaccaacaaa
caggaagggtttgccgtccctgcccctcttgataataaaacaactaattcatctgccagc
aacaacttcagatgccggagtgtgagccctgccgtccatcgccaacgtaatctcagtgga
agcaccctctacccagtgtctaatatcccacgatctaatgtgaccccctttggaagccca
gtagccccagaagttcatgttttcacaaatgttcacacagatgcatgtgccaacaccata
gctcaaagaagtcaatcagtcccattgacagtcatgatgcagacagccttcccaaatgct
cttcagaagcaaactaacagtaagaaaataactaatgttttgttgagtaaacttgattct
gacaatgatgatgcagtgagaggtttgggaatgaacaacctgccctcaaattacacagcc
cgaatgaatctcactcagattttggaaacttccactgtttttcctagtgccaactctcag
aatatgattgattccagcacttctgtgtatgaattccaaacaccatcttacctcaccaaa
agtaatagcaccgatcagatcagtttttctcctggagataatcaagcacaatctgaaatt
ggagagcaacaattagatttcagtagcactgttaaagacctgttgagtggagacagcttg
caaaccaaccagcagctggtaggtcaggtagcatctgatctcaccaacactgcatctgat
ttctctagtgatatcaggttgtcttctgacctctcaggcagcatcaatgatttgaacact
ttagacccaaatctgctgtttgatccaggtcgtcagcagggacaagatgatgaagctaca
ctggaagaattaaagaatgacccgttgtttcaacaaatttgcagtgaatccatgaactct
atgacttcatcaggttttgaatggatagaaagcaaggaccatcctactgttgaaatgttg
ggttaa
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