KEGG   Sciurus carolinensis (gray squirrel): 124976779
Entry
124976779         CDS       T08117                                 
Name
(RefSeq) DNA-binding protein RFX7
  KO
K09175  DNA-binding protein RFX7
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124976779
Transcription factors [BR:ncar03000]
 Eukaryotic type
  Other basic domains
   RF-X
    124976779
SSDB
Motif
Pfam: RFX5_N RFX_DNA_binding Pox_D5 AadA_C Cdc6_C
Other DBs
NCBI-GeneID: 124976779
NCBI-ProteinID: XP_047395664
LinkDB
Position
2:97873793..97993341
AA seq 1461 aa
MAEEQQQPPPQQPDAHQQLPPSAPNSGVALPALVPGLPGTEASALQHKIKNSICKTVQSK
VDCILQEVEKFTDLEKLYLYLQLPSGLSNGEKSDQNAMSSSRAQQMHAFSWIRNTLEEHP
ETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLR
KKAFVHMPTLPNLDFHKTGDGLEGAEPSGQLQNIDEEVISSACRLVCEWAQKVLSQPFDT
VLELARFLVKSHYIGTKSMAALTVMAAAPAGIKGITQPSAFIPTAESNSFQPQVKTLPSP
IDAKQQLQRKIQKKQQEQKLQSPLPGESSAKKSEGSTANGVTNLPNGNSAILSPQPIGIV
VAAVPSPIPVQRTRQLVTSPSPMSSSDGKVLPLNVQVVTQHMQSVKQAPKTPQNVPASPG
GDRSARHRYPQILPKPANSSALTIRSPTTVLFTSSPIKTAVVPASHMSSLNVVKMTTISL
TPSNSNAPLKHSASVSSATGTTEESRSIPQIKNGSVVSLQSPGSRTSGTGGTSAVEVKME
PETTSDEHPVQCQENSDGAKIPQTTPSALLGQKSNTDGAVQKPSNEGVIELKTTKVCDQR
TKCKSRCNEVLPGTSTGNNQSTITLSVATQNLTFTSTSSPSNGDSIKTDPKLCTRSPRKR
LSSTLQETQVPPVKKPIVEQPPGVSIEGQKPGSVKKDQKVPHSGKLESSTAGAQTPNKVS
ISVNSHLVENQPLGSALITSDSVLEQQQTTPSSSPDIKVKLEGNVFLLDNDSKSDGSFNT
NEWQHVTKDSEFISATCEQQQDIGVMTIPEHSDINDLEKSVWELEGMPQDAYSQQLHSQI
QESPLNQIQAQSSDQLPLQSELKEFEPSVSQANESYFPFDDELTQDSIVEELVLMEQQMS
MNNSHSYGNCLGMTLQSQSVTPGAPMSSHASSTHFYHPIHSNGTPIHTPTPTPTPTPTPT
PTPTPTSEMIAGSQSLSRESPCSRLAQTTPVDSALGSSRHTPIGTPHSNCSSSVPPSPVE
CRNPFAFTPISSSMAYHDASIVSSSPVKPMQRPMATHPDKTKLEWMNNGYSGVGNSSVSG
HGILPSYQELVEDRFRKPHAFAVPGQSYQSQSRHHDTHFGRLTPVSPVQHQGATVNNTNK
QEGFAVPAPLDNKTTNSSASNNFRCRSVSPAVHRQRNLSGSTLYPVSNIPRSNVTPFGSP
VAPEVHVFTNVHTDACANTIAQRSQSVPLTVMMQTAFPNALQKQTNSKKITNVLLSKLDS
DNDDAVRGLGMNNLPSNYTARMNLTQILETSTVFPSANSQNMIDSSTSVYEFQTPSYLTK
SNSTDQISFSPGDNQAQSEIGEQQLDFSSTVKDLLSGDSLQTNQQLVGQVASDLTNTASD
FSSDIRLSSDLSGSINDLNTLDPNLLFDPGRQQGQDDEATLEELKNDPLFQQICSESMNS
MTSSGFEWIESKDHPTVEMLG
NT seq 4386 nt   +upstreamnt  +downstreamnt
atggcagaggaacaacaacagccgccaccacagcagcctgatgcccatcagcagcttccc
cccagcgcccccaactcgggggtggctctgccagcccttgtgcccgggctgccagggaca
gaggccagcgcgctgcaacacaagatcaagaactccatctgcaaaactgtacaatctaaa
gtggactgcattttgcaagaagttgagaagtttacagacctagagaaactctacctctac
cttcagctgccttctggtctcagcaatggagagaaaagtgatcagaatgccatgtcatct
agtcgggcacagcaaatgcatgccttttcctggattcggaataccctagaagaacatcct
gagacttcactgcccaaacaggaagtctatgatgaatacaagagctactgtgacaatctt
ggttaccatccattgagtgctgctgacttcggaaagataatgaaaaatgtctttccaaac
atgaaggcacgtcgtttgggcactagaggcaaatctaaatattgttacagtggactaagg
aaaaaagcttttgttcatatgccaacactgcccaaccttgactttcacaaaactggagat
gggttggaaggagctgaaccttctgggcagcttcagaatattgatgaggaagttatatct
tctgcttgccgtcttgtttgtgagtgggcccagaaagtgttaagccagccatttgacaca
gtcttggaattagcccgcttcctcgtaaaaagtcactatataggcaccaagtcaatggca
gctttaactgtaatggcagcagcaccagcaggaattaaaggaattacccagccttctgct
tttatacctacagctgaaagtaattcctttcagccacaagtaaagactttgccatctcct
attgatgctaaacagcagttacaacggaaaatccagaaaaagcagcaagaacagaaacta
caatcccctttgccaggagaatcatcagcaaaaaaatcagaaggctcaacagccaatgga
gtgactaatcttcctaatggaaattctgcaatcctttctcctcagcccattggtatcgtt
gtggcagctgtccctagtcccattccggtccagcggaccaggcaattggtaacttcacca
agtcctatgagctcttctgacggcaaagttcttcccctcaacgtacaggtggtcactcag
cacatgcagtctgttaaacaggcaccaaagactcctcagaacgtcccagccagtcctggt
ggggatcgttctgcccgacaccgttaccctcagatcttacccaaaccagccaacagcagt
gcactcaccattcgctctccaactactgtcctctttactagcagtcccatcaaaacagct
gttgtacccgcttcacacatgagttctctaaatgtggtgaaaatgacaactatatccctc
acacccagcaacagtaatgcccctcttaaacattctgcctcagtcagtagtgctactgga
acaacagaagaatcgaggagcattccacagattaagaatggttctgttgtttctcttcag
tctcctggatccaggaccagtggcactgggggaacatctgctgtggaagtcaaaatggaa
cctgaaacaacatcagatgagcatcctgtacagtgccaagaaaactctgatggggctaaa
attccccaaacaacacctagtgctcttttggggcagaaaagtaatacagatggagcagtg
caaaaaccttcaaatgaaggtgtcattgaattaaaaacaactaaggtctgtgaccagagg
accaaatgtaaaagtcgctgtaatgaagttctgccaggcacttcaacaggcaataatcaa
agcactatcactctctcagttgctactcagaacctaactttcaccagcactagctcacca
tctaatggtgactcaataaagacagacccaaaattatgcactagaagcccaagaaaacga
ctgtcttctacattgcaagagacccaggtgcctcctgtaaagaaaccaattgtggaacag
cctcctggagttagcatagaaggtcagaaacccggcagtgttaagaaggaccaaaaggtt
ccacattcagggaaattagaaagttcaacagcaggtgctcagactcctaacaaggtatca
atcagtgtcaattcacacctggtggaaaatcaacccttgggttctgctcttattaccagt
gattcagttttggaacaacaacaaacaacaccgtcatcgtctccagatataaaagtaaaa
cttgaagggaatgtctttctcttggacaatgattcaaaatcagatggcagctttaataca
aatgaatggcaacatgtcactaaggattctgaatttatatctgccacctgtgaacaacag
caagatatcggtgtcatgacaattcctgaacactctgatatcaatgatttagagaaatct
gtttgggaattagaaggaatgccacaggacgcatatagccagcagctacatagccagata
caagaatctcctttgaatcaaatacaagcacagtcttcagatcagttacctctgcaatcc
gaactgaaggagtttgaaccttctgtttcccaagcaaatgaaagctactttccttttgat
gatgaacttactcaagatagtattgtggaagagctggtgcttatggagcagcagatgtca
atgaacaattcacattcgtatggtaactgtttgggaatgactcttcagagtcagtcagta
actccgggagctccaatgtcatctcatgcctctagcacccacttctatcatccaatccat
agcaatggcactccaatccacacacccacacccacacccactcctacaccaaccccaaca
ccaactccaacccctacatctgaaatgattgctgggtctcagagtctgtcacgggagagc
ccttgctccaggctagcccagactacacctgtggatagtgctttaggaagtagccgtcat
acacccattggtactccacattctaactgcagcagtagtgtccctcccagccctgttgaa
tgcaggaatccatttgcattcaccccaataagctctagtatggcatatcatgatgccagc
attgtctcaagcagtcctgtgaaaccgatgcaaagacccatggccacccaccctgataaa
accaagcttgaatggatgaataatgggtatagtggggttggtaactcatcagtttctggc
catggcattctcccaagttatcaggaactagtggaagatcgtttcaggaaacctcatgct
tttgctgtgcctggacagtcttatcagtctcaatccagacatcatgacactcattttggt
cgtttgactcctgtctctcctgtgcagcatcaaggtgccactgtaaataacaccaacaaa
caggaagggtttgccgtccctgcccctcttgataataaaacaactaattcatctgccagc
aacaacttcagatgccggagtgtgagccctgccgtccatcgccaacgtaatctcagtgga
agcaccctctacccagtgtctaatatcccacgatctaatgtgaccccctttggaagccca
gtagccccagaagttcatgttttcacaaatgttcacacagatgcatgtgccaacaccata
gctcaaagaagtcaatcagtcccattgacagtcatgatgcagacagccttcccaaatgct
cttcagaagcaaactaacagtaagaaaataactaatgttttgttgagtaaacttgattct
gacaatgatgatgcagtgagaggtttgggaatgaacaacctgccctcaaattacacagcc
cgaatgaatctcactcagattttggaaacttccactgtttttcctagtgccaactctcag
aatatgattgattccagcacttctgtgtatgaattccaaacaccatcttacctcaccaaa
agtaatagcaccgatcagatcagtttttctcctggagataatcaagcacaatctgaaatt
ggagagcaacaattagatttcagtagcactgttaaagacctgttgagtggagacagcttg
caaaccaaccagcagctggtaggtcaggtagcatctgatctcaccaacactgcatctgat
ttctctagtgatatcaggttgtcttctgacctctcaggcagcatcaatgatttgaacact
ttagacccaaatctgctgtttgatccaggtcgtcagcagggacaagatgatgaagctaca
ctggaagaattaaagaatgacccgttgtttcaacaaatttgcagtgaatccatgaactct
atgacttcatcaggttttgaatggatagaaagcaaggaccatcctactgttgaaatgttg
ggttaa

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