Sciurus carolinensis (gray squirrel): 124976787
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Entry
124976787 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 11-like
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124976787
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124976787
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
PmrD
Motif
Other DBs
NCBI-GeneID:
124976787
NCBI-ProteinID:
XP_047395695
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Position
2:126586942..126596248
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AA seq
546 aa
AA seq
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MGSRNSSSAGSGSGDPSEGLSRRGAGLRRSEEEEEEDEDVDLAQVLAYLLRRGQVRLVQG
GGAANLQLIQALSDSEEEHDSAWDGRLGDRYNPPVDATPDTRELECNEIKTQVELATGRL
GLRQAAQEHSFPRMLHQRERGLCHRGSFSLGERSRVMSHFLPNDLGFTDTYSQKAFCGIY
SKDGQIFMSACQDQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSD
YIHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGREILGGANDGCLYVFDREQNRRT
LQIESHEDDVNAVAFADISSQILFSXGDDAICKVWDRRTMREDDPKPVGALAGHQDGITF
IDSKGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKL
KLPGDSSLMTYRGHGVLHTLIRCRFSPTHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLT
NHKACVRDVSWHPFEEKIVSSSWDGNLRLWQYRQAEYFQDDMPESEERSGAPTPVSRSST
AFSSPQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggatctcggaacagcagcagcgcaggatccgggtccggagacccctctgagggcttg
tcccgaagaggggctggcctgcgtcggagtgaggaagaggaagaggaggatgaagatgtg
gatctggcccaggtactggcctatctccttcgcagaggccaagtgaggttggtgcaggga
ggaggtgcagcaaatttacaactcatccaggccctctcggactcagaggaagagcatgac
agtgcctgggatggtcgtcttggagatcgatacaatccacctgtggatgcaacccctgac
actcgagaactggaatgcaacgagatcaagacacaggtggaactggccacagggcggctg
ggacttaggcaggcagcccaggagcacagttttcctcgaatgttacaccagagagaacgg
ggcctctgccaccggggaagcttctcccttggagaacggtctcgagtgatgtctcacttc
ttgcccaatgatctgggcttcactgatacctactcacagaaggctttctgtggcatctac
agcaaagatggtcaaatcttcatgtctgcttgccaagaccagacaatccgactgtatgac
tgccgatatggccgcttccataaattcaagagtatcaaggcccgggatgtaggctggagt
gtcctagatgtggccttcacccctgatgggaaccacttcctctactccagctggtctgat
tacattcatatctgcaacatttatggggaaggagacacacacactgccctggatctgagg
ccagacgagcgtcgttttgctgtcttctccattgccgtctcctcagatggaagagaaata
cttgggggggccaatgatggttgtctgtatgtctttgaccgagaacaaaaccggcgcacc
cttcagattgagtctcatgaagatgatgtgaatgcagtggcctttgctgatataagctcc
cagatcctgttttctnggggagatgatgccatctgcaaagtgtgggatcgccgcaccatg
cgggaggatgaccccaagcctgtgggtgcactggctggacaccaggatggcatcacgttc
attgacagcaagggtgatgcccggtatctcatctccaactccaaagaccagaccatcaag
ctctgggatatccgacgcttttccagccgggaaggcatggaagcctcacgccaggctgcc
acccagcaaaactgggactaccgttggcagcaagtccccaaaaaagcctggcggaagctg
aagctcccaggggacagctccttgatgacctaccgaggccatggggtgctgcacaccctc
atccgctgccgcttctccccaactcatagcacgggccagcagttcatctatagtggctgc
tccactggcaaagtggttgtatacgatctcctcagcggccacatcgtgaagaagctgacc
aaccataaggcctgtgtgcgggatgtcagttggcacccctttgaagagaagattgtcagc
agttcgtgggacgggaacctgcgtctgtggcagtatcgccaggctgagtacttccaggat
gacatgccagagtcagaggaacgttccggtgcccctaccccggtgtcccgctcctctaca
gccttttcctcaccccagtag
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