Sciurus carolinensis (gray squirrel): 124976795
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Entry
124976795 CDS
T08117
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04110
Cell cycle
ncar04218
Cellular senescence
ncar04350
TGF-beta signaling pathway
ncar05165
Human papillomavirus infection
ncar05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124976795
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124976795
04218 Cellular senescence
124976795
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
124976795
09172 Infectious disease: viral
05165 Human papillomavirus infection
124976795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124976795
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
124976795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TFIIB
Motif
Other DBs
NCBI-GeneID:
124976795
NCBI-ProteinID:
XP_047395704
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All DBs
Position
2:21094804..21156080
Genome browser
AA seq
1073 aa
AA seq
DB search
MFEDEPHADGAAVVAAAGEALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVMHWLA
CSLYVACRKSIIPTVGKGIMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRE
RIERLERNFEVSTVIFKKFEPIFLDIFQNPYDELPKLPRSRKQRRIPCSVKDLFNFCWTL
FVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIVCPNRRDLLNPSFKGLPSDFHTADFR
ASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLSSFTDNSK
AVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGDTPLGKLTAQANVEYNLQQHFE
KKRTFAPSTPLTGRRYLREQEAIITPVASATQSVSRLQSTVAGLKNAPSEQLINIFESCT
RNPKENIMKIVKGIGETFCQHYTQSTDEQPGSHIDFAINRLKLAEILYYKMLETVMVQET
RRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSSPRTFPWIIEVLDLQPFYFYKVIEVV
IRSEEGLSRDMVKHLNSIEEQILESLAWSHNSALWETLQASANKVPTCEEVSQGKVIFPN
NFETGNGGNVQGHLPMMPMSPIMHPRVKEVRTDSGSLRRDMQPLSPISVHERYSSPTAGS
AKRRLFGEDPPKEVLMDKILTEGTKLKIAPSSSITTENISISPGQTLLTMATATVTGTTR
HKVTIPLHGVANDAGEITLIPISMNTIQESNIESPVSITAHSLIGASPKHIHLTKAQEVH
LTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCSDLM
KDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSVPKEVVAYN
NDINGDFEMTDGDLENATKTPNCPNGPVKEERGDLIKFYNTIYVGRVKSFALKYDLSNQD
HVMDAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNGSGLTPRSALLYKFNGSPSKSLK
DINNMIRQGEQRTKKRAIAISGDAESPAKRLCQENDDVLLKRLQDVVSERANH
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggacgagccccacgccgacggggcggcggtggtcgccgcggccggggaggcg
ctgcaggccctatgccaggagctgaacctggacgaggggagcgcggccgaagccctggac
gacttcaccgccatccgaggcaactacagcctagagggagaagttatgcattggttggca
tgttcattatatgttgcatgtcgcaaaagcattattcccacagttgggaagggtatcatg
gaaggaaactgtgtttcacttaccagaatactacgttcagctaaattaagtttaatacag
tttttcagtaaaatgaagaagtggatggacatgtcaaatcttccacaagaatttcgtgaa
cgaatagaaaggctagagagaaatttcgaagtgtctactgtaatttttaaaaaattcgaa
ccaatttttttagatatatttcaaaatccatatgatgagctaccaaagttaccacgaagc
aggaaacagaggaggattccttgtagtgttaaggatctctttaatttctgttggacactg
tttgtttatactaagggtaattttcgtatgattggggacgatttagtaaactcttaccat
ttacttctctgctgcttggatttgatttttgccaatgccattgtgtgcccaaatagacga
gacttgctaaatccatcttttaaaggtttaccatctgatttccatactgctgacttcagg
gcttctgaagaacctccctgcatcattgctgtactgtgtgaactgcatgatggactttta
gtagaagcaaaaggaataaaggagcactactttaaaccatatatttcaaaactctttgat
aggaagattttaaaaggagaatgtctccttgacctttccagttttactgataatagcaaa
gcagtgaacaaagagtatgaagagtatgttctaactgttggtgactttgatgagaggatc
tttttgggagcagatgcagaagaggaaattggaacacctcgaaagttcactggtgacacc
ccattagggaaactgacagcacaggctaatgtggagtataacctacaacagcattttgaa
aaaaaaagaacatttgcaccttctaccccactgacaggacggcgatatttacgagaacaa
gaagccattattactcctgttgcttcagctacccagagtgtgagccgcttacagagtact
gtggctggactgaaaaatgcaccaagtgaacaacttataaatatttttgaatcttgtacg
cggaatcctaaggaaaatattatgaaaatagtaaaaggaataggagaaactttctgccaa
cactatactcaatcaacagacgaacagccaggatctcacatagactttgctataaacaga
ctaaagctggcagaaattttgtattataaaatgttagagactgtaatggttcaggaaaca
cgaagacttcatggaatggacatgtcagttcttttagagcaggatatatttcatcgttcc
ttgatggcttgttgtttggaaattgtgctgtttgcctatagctcacctcgtacttttcct
tggattattgaagttctcgatttgcagccattttatttttataaggttatcgaggtggtg
atccgctcagaggaggggctctccagggatatggtaaaacacctaaacagcattgaagaa
caaattttggagagtttagcatggagtcacaattccgctctgtgggagactctccaggct
tctgcaaacaaagttcctacctgtgaagaagtgagtcagggcaaggttatattcccaaat
aactttgaaacaggaaatggaggaaatgtacagggacatcttcccatgatgccaatgtct
cctataatgcatccaagagtcaaagaagttcggactgacagtggaagtcttcgaagggat
atgcagccattgtctccaatttctgtccatgaacggtacagttctcctactgcagggagt
gctaagagaagactttttggagaggacccaccaaaggaagtgcttatggacaagattttg
acagaaggaacaaaattgaaaattgctccttcttcaagcatcactactgaaaatatatcc
atatcccctgggcaaactcttctaacaatggccacagccacagtaacagggacaacaaga
cataaagttacaattccattgcacggtgttgcaaatgatgctggagaaatcacactgata
cctatttccatgaatacaattcaggaatccaacattgagagtcctgtatcaattactgct
cactcgttaattggtgcttctccaaaacatattcatctgactaaagcacaagaggttcat
ctgactggaataagcaaaccaaagagaactgggtccttagcactcttttacaggaaggtt
tatcatttggcaagtgtacgtttacgtgatttatgtttaaaactggatgtttcaaatgaa
ttacgaagaaagatatggacatgttttgagttcactttagttcactgttctgatttaatg
aaagacaggcatttggatcagctccttctttgtgccttttatatcatggcaaaggtaaca
aaagaagaaagaacttttcaagaaataatgaaaagttataggaatcagcctcaagctaat
agtcacgtatatagaagtgttcttttgaaaagtgttccaaaagaagttgtggcatacaat
aatgacataaatggtgattttgaaatgacagatggtgacttggaaaatgccacaaaaaca
cctaactgtcccaatggaccagtgaaagaggagagaggcgatcttatcaaattttacaat
acaatatatgtaggaagagtgaagtcatttgcattgaaatatgacttgtcgaatcaggac
catgtgatggatgctccaccactctctccttttccacatattaaacaacagcctggctca
ccacgccgaatttctcagcagcattccatttatgtttccccacacaagaatgggtcaggc
cttaccccaaggagtgctttgctgtacaagttcaacggcagtccttctaagagtttgaaa
gacatcaacaacatgataaggcaaggtgagcagagaaccaagaagcgagcaatagccatc
agtggagatgcagagtcacctgccaaacgcctctgccaggaaaatgatgatgttttactt
aaacgactgcaggatgttgtcagtgaaagagcaaatcactaa
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