Sciurus carolinensis (gray squirrel): 124976796
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Entry
124976796 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: mesoderm induction early response protein 1-like
KO
K28169
mesoderm induction early response protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124976796
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
124976796
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Gene cluster
GFIT
Motif
Pfam:
ELM2
MIER1_3_C
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
124976796
NCBI-ProteinID:
XP_047395709
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Position
1:complement(154503648..154565082)
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AA seq
565 aa
AA seq
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MDGASSGGGGSSEGGGGSSGSGYGVVARFSQCLAEFRTWLRTNWLRFNADKTDVMLPSVE
SSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIH
ELLSLYGYDSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDE
TQSSNDDPSQSVVSQDTQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSM
FQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIVFLKDASRRTGDEKGVEAIPEG
SHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDF
HLIQANKVRTRSVGECVAFYYMWKKSERYDFXAQQTRFGKKKYNLHPGVTDYMDRLLDES
ESAASSRAPSPPPTASNSSNSQSEKEDGTISNSNQNGVSSNGPGEILNKEEVKVEGLHVN
GPTGGNKKPLHADMDTNGYETDNLTTDPKLAHMTARNENDLDEKSERPAKRRRVNSNGKE
SPGSSEFFQEAISHGKFEELENTDD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggatggggcttcttcaggcggcggtggcagcagcgaaggtggcggcggcagcagcggc
agcggctatggtgtggtggctcgattctcccagtgcctggctgagtttcggacgtggtta
agaaccaactggttgaggttcaatgcagacaagacggatgtgatgctgccatctgttgag
tcttcaagtccaggaggttcagcaacatcagatgaccatgaatttgatccatcagctgac
atgctggttcatgattttgatgatgaacgaacattagaagaggaagaaatgatggaagga
gaaacaaacttcagttctgaaatagaggatcttgcaagggaaggcgacatgccaattcat
gaacttctcagtctttatggttatgatagtactgttcgactacctgaagaagatgaggag
gaagaagaggaagaagaggagggtgaagatgatgaagatgccgataatgatgacaacagt
ggctgtagtggggaaaataaagaagagaatataaaggattcatcaggtcaggaagatgaa
actcagtcttccaatgatgatccatcacagtctgttgtttctcaagatacccaggaaata
atccgcccacgtcgatgtaaatattttgatacaaatagtgaaatagaagaagaatctgaa
gaagatgaggactatattccatcagaagactggaaaaaagagattatggtgggctccatg
tttcaagcagaaattccagttggcatttgtagatacaaagaaaatgaaaaagtatatgaa
aatgatgatcagctcctgtgggaccctgagtacttaccagaagataaagtgattgtattt
cttaaggatgcatctagaagaacaggtgatgagaaaggtgtagaagcaattcctgaagga
tctcacataaaagacaatgaacaggcattatatgaattggttaaatgtaattttgataca
gaagaagcattgagaagattaagatttaatgtaaaagcagctagagaggaattatctgtt
tggacagaggaagaatgtagaaattttgaacaagggctgaaggcctatggaaaagatttt
catttgattcaggctaataaagtacgaacaagatcagttggtgaatgtgtagcattctat
tatatgtggaaaaaatcggaacgttatgatttcnttgcccagcaaacacgatttggaaaa
aagaaatataatcttcatcctggtgtaacggactacatggatcggcttttggatgaaagt
gaaagtgctgcatcaagtcgagcaccatcccctcccccaactgcctcaaacagcagcaat
agccagtctgagaaagaagatggcactataagcaatagtaaccaaaatggggtgtcatct
aatggaccaggtgaaatattaaacaaagaagaagtaaaagttgaaggattacacgtcaat
ggaccaacaggtggaaataagaaaccacttcacgcagacatggatactaatggttatgaa
acagataacttaaccactgacccaaaacttgcccatatgactgcaagaaatgaaaatgat
ttggatgaaaaaagtgagagacctgccaaaaggcgaagggtaaatagcaatggaaaagaa
agtcctggttcttctgaatttttccaagaagcaatatcacatggaaaatttgaagaactt
gaaaacacagatgactaa
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