Sciurus carolinensis (gray squirrel): 124976855
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Entry
124976855 CDS
T08117
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124976855
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124976855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
LRR_9
LRR_Zer-1
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
124976855
NCBI-ProteinID:
XP_047395823
LinkDB
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Position
2:complement(80560442..80640420)
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AA seq
679 aa
AA seq
DB search
MRLVTEPSGRTARPRCSVSFLGSGRGQPSADLQKPSSPLPSSASLLTPSCSRPSPRSAEW
QVSERMLAGGARSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKR
FVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL
RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY
ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRL
KVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGT
IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNL
ETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFTC
RRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGT
LEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGEA
NSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRK
SDAGISSADAPRKFNMKMI
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggtgaccgagccgagcggacggacggcgcgcccgagatgcagtgtgtccttc
cttggcagtggacgtgggcagccctcggcagacttgcaaaagccctccagcccccttccc
agctctgcctccctcctcactccatcctgtagcagacctagcccccggagtgctgagtgg
caggtgagcgagaggatgctggcggggggcgcaaggagcatgcccagccccctcctggcc
tgctggcagcccatcctcctgctggtgctgggctccgtgctgtcaggctcggccacaggc
tgcccgccccgctgcgagtgctcggcccaggaccgcgctgtgctctgccaccgcaagcgc
tttgtggcggtgcccgagggcatccccaccgagacccgcctgctggacctgggcaagaac
cgcatcaagactctcaaccaggacgagtttgccagcttcccgcacctggaggagctggag
ctcaacgagaacatcgtgagcgccgtggagcccggcgccttcaacaacctcttcaacctc
cggacgctggggctccgcagcaaccgcctgaagctcatcccactgggcgtcttcaccggc
ctcagcaacctgaccaagctggacatcagcgagaacaaaatcgtcatcctgctggactac
atgttccaggacctgtacaacctcaagtcgctggaggtcggcgacaacgacctcgtctac
atatcccaccgcgccttcagcggcctcaacagcctggagcagctgacgctggagaaatgc
aatctgacctccatccccaccgaggcgctgtcccacctgcacggtctcatcgtcctgcgg
ctccggcacctcaacatcaatgccatccgggactactccttcaagaggctgtaccggctc
aaggtcctggagatctcccactggccctacctggacaccatgacccccaactgcctctac
ggtctcaacctgacgtccctgtccatcacacactgcaacctgaccgcagtgccctacctg
gctgtgcgccacctggtctatctccgtttcctcaacctctcctataaccccatcggcacg
atcgagggctccatgctgcatgagctgctaaggctgcaggagatccagctggtgggcggg
cagctggccgtggtggagccctatgccttccgcggcctcaactacctgcgcgtgctcaac
gtatccggcaaccagctgaccaccctggaggagtcggccttccactcggtgggcaacctg
gagacactcatcctggactccaaccctctggcctgcgactgccggctcctgtgggtgttc
cggcgccgctggcggctcaacttcaaccggcagcagcccacatgtgccacgcccgagttc
gtccagggcaaggagttcaaggacttcccggatgtgctcctgcccaactacttcacctgc
cgccgcgcccgcatccgggaccgcaaggcccagcaggtgtttgtggatgagggccacacg
gtgcagtttgtgtgccgggcggatggcgacccgccacctgccatcctctggctctcgccc
cgcaagcacctggtctcggccaagagcaacgggcggctcacggtcttccccgatggcacg
ctggaggtgcgctacgcccaggtacaggacaacggcacgtacctgtgtatcgcggccaac
gcgggtggcaacgactccatgcccgcccacctgcatgtacgcagctactcgcccgactgg
ccccatcagcccaacaagaccttcgccttcatctccaaccagccgggtgagggagaggcc
aacagcacccgcgccaccgtgcctttccccttcgacatcaagaccctcatcattgccacc
accatgggcttcatctccttcctgggcgttgtcctcttctgcctggtgctgctattcctc
tggagccggggcaagggcaacacgaagcacaacatcgagatagagtacgtgccccggaag
tcagacgcgggcatcagctccgccgacgcgccccgcaagttcaacatgaagatgatatga
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