Sciurus carolinensis (gray squirrel): 124976862
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Entry
124976862 CDS
T08117
Name
(RefSeq) selenocysteine insertion sequence-binding protein 2-like
KO
K19539
selenocysteine insertion sequence-binding protein 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124976862
03012 Translation factors [BR:
ncar03012
]
124976862
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124976862
Translation factors [BR:
ncar03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
124976862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
124976862
NCBI-ProteinID:
XP_047395831
EnsemblRapid:
ENSSCRG00010013181
LinkDB
All DBs
Position
2:104221466..104267176
Genome browser
AA seq
1101 aa
AA seq
DB search
MDRAPTDQNVKLSAEVEPFIPQKKNPDTFMIPMALPNDNGSVSGVEPTPIPSYLITCYPF
VQENQSNRQFPLYNNDIRWQQPNPNPTGPYLAYPIISAQPPVSTEYTYYQLMPAPCAQVM
GFYHPFPTPYSNTFQAANTVNAITTECTERPNQLGQVFPLSSHRSRNSNRGPVVPKQQLL
QQHIKSKRPLVKNVATQKETNAAGPDNRSKIVLLVDASQQTDFPSDIANKSLSESTATML
WKSKGRRRRTSHPTAESSSEQGASEADIDSDSGYCSPKHNNNQPAAGALRNPDSGTINHV
ESSVCAGGVNWSSVTCQATQKKPWLEKNQAFSRGGRQTEQRNNSQVGFRCRGHSTSSERR
QNLQKRQDNKHLNPSQTHRSDPNSESLYFEDEGGFQELHENGNAKDENIQQKLSSKVLDD
LPENSPINIVQTPIPITTSVPKRAKSQKKKALAAALATAQEYSEISMEQKKLQEALSKAA
GKKNKTPVQLDLGDMLAALEKQQAAMKARQITNTRPLSYTVVTATSFHTKDSTNRKPLTK
SQPCLTSFNSLDITSSKTKKGKEKEIAKLKRPTALKKVILKEREEKKGRLTVDHNLLGSE
EPTEMHLDFIDDLPQEIISQEDTGLSVPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSP
MASSTITKIHSKRFREYCNQVLCKEIDECVTLLLQELVSFQERIYQKDPVRAKARRRLVM
GLREVTKHMKLNKIKCVIISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALG
RCVNKLVPVSVVGIFNYFGAESLFNKLVELTEEARKAYKDMVAAMEQEQAEEALKNVKKV
PHHMGHSRNPSAASAISFCSVISEPISEVNEKEYETNWRNMVETSDGLETSENEREVSCK
HSSSEKPIKLPLDTTHVGKQPSLVSAGSTTSATDPGKSTAGDKEEVKPDDLEWASQQSTE
TGSLDGSCRDLLNSSITSTTSTLVPGMLEEEDDEDEEEEEDYTQEPISVEVQLNSRIESW
VSETQRTMETLQLGKTLNGSEEDNVELGGEEEAEASEMLEPGMDNEAWTPDQQANPEQEK
SSNCSSMNKEQSDSNSTPQNI
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagccccaacagaccagaatgtcaagctttcagctgaggtagagccgtttatt
ccccagaagaagaatcctgatacgtttatgatccctatggctctcccaaacgataacgga
agtgtttctggtgtagaaccaactccaattcccagctacttgattacgtgttatccattt
gttcaggaaaaccagtccaataggcaatttcctttatataataatgatatacgatggcaa
cagcccaacccaaatcctactggaccataccttgcctaccccattatatctgctcagcca
cctgtttctacagagtatacgtattatcagctgatgccagcaccatgcgcccaagttatg
ggtttctatcatccttttcctacaccttactccaacacctttcaggctgcaaatactgta
aatgctatcaccacagaatgcactgagcgtccaaatcagcttggacaggtctttccgttg
tccagtcatcgaagcagaaacagtaacagaggaccagtagtaccaaaacaacagctttta
cagcagcacataaaaagcaaaagaccactggtgaaaaatgtagctactcagaaagaaaca
aatgcagcaggtcctgataatcgatcaaaaattgtgcttctggtagatgcttcacaacaa
actgattttccttcagatattgctaacaagtctctctcagagagcactgccacaatgctt
tggaagtccaaaggcaggaggagaagaacttcccaccccactgctgaatcctctagtgaa
cagggggcgagcgaagccgacattgacagtgatagtggttactgcagtcccaaacacaac
aacaaccagcctgctgcaggggctttgagaaatcctgattctgggaccataaatcatgtg
gaatcatctgtatgtgcaggtggtgtaaattggtccagtgtaacttgccaggcaactcag
aagaaaccctggttggaaaaaaatcaggcgttttccagaggtggaaggcaaacggaacaa
agaaataattcacaggttggattcagatgccgaggccacagtacttcctcagaaagaaga
cagaatttgcaaaagagacaagataataagcatttaaatcctagtcagacccatagaagt
gacccgaattctgagtctttatattttgaggatgaaggtggatttcaagaactacatgaa
aatggaaatgctaaggatgagaatattcaacagaaactttcttcaaaagtattggatgat
ttacctgaaaactcaccaatcaatatagttcagactccaattcccattaccacttcagtt
cctaaacgtgcaaaaagtcagaagaagaaagctttagcagcagctcttgccacagctcaa
gaatattcagaaataagtatggagcaaaaaaaattacaggaagctttatcaaaagcagct
ggaaaaaagaataaaacacctgtgcagctagatttaggggacatgttagctgctctggaa
aaacaacaagcagcaatgaaagcgcggcagattactaatacccgacctctgtcatataca
gtggttactgcaacttcttttcacactaaagactctactaacagaaaacctttaacaaaa
agccaaccctgcttgacatcttttaactctttggatattacttcctctaaaacaaaaaaa
ggaaaagagaaggaaattgcaaaactaaaacgacctacagcacttaaaaaggttattttg
aaagaaagagaggaaaagaagggacgtttaactgtggaccacaatcttttgggatctgag
gagccaacagaaatgcatttagattttattgatgatttgccacaggagatcatttcccag
gaagatactggactgagcgtgcccagtgatacttcactttctccagcaagtcagaattct
ccatactgcatgacacctgtgtcacaaggctctcctgccagttctgggataggcagtcca
atggcatcatcaacaataaccaaaatccatagcaaaagatttagagagtattgtaatcag
gttctttgtaaagagattgatgaatgtgtgacccttcttctccaagaacttgtcagtttt
caggaacgcatctaccaaaaggatcctgtaagagcaaaagcacgaagacggctggttatg
ggtctaagggaggtcaccaaacatatgaagttaaataagatcaagtgtgttataatatct
ccaaactgtgaaaaaatacagtcaaaaggtggactggatgaggctctctacaatgtcata
gctatggcacgggaacaagaaattcctttcgtgtttgctcttggaagaaaagctctagga
cgctgtgtgaacaagctggttcctgttagtgtagtgggaatcttcaactactttggtgct
gagagcctgtttaataaattagtagaactcactgaggaagccaggaaagcatataaagat
atggttgcagcaatggaacaagaacaggctgaagaagccttaaaaaatgtgaaaaaggta
ccacaccacatggggcattctcggaacccctctgcagcaagtgctatttctttttgcagt
gttatttctgaacctatctctgaagtaaatgaaaaggaatatgaaacaaattggagaaac
atggtggaaacttcagatggactggaaacatcagaaaatgagagagaggtttcctgtaag
cacagcagttctgaaaaacccattaaacttccacttgacacaactcatgttggtaagcaa
ccatcattagtgtctgcaggcagtactacctcagctacagatcctgggaaatctacagca
ggcgataaagaggaagtgaagccagatgacctggaatgggcctcacaacagagtacagag
acaggctctttggatggcagttgccgagatcttttaaattcctctatcaccagcaccacc
agcactcttgtacctggcatgcttgaagaagaggatgatgaagatgaggaagaggaggaa
gattatactcaagaacccatatcagtagaagtgcagcttaatagtagaattgagtcatgg
gtctcagagacccagagaactatggaaacccttcagcttggaaaaacccttaatggttct
gaggaagacaatgtagagctaggtggagaagaggaagcagaagcatctgaaatgttggag
ccagggatggacaatgaagcatggactcctgaccaacaagccaatcctgagcaggagaag
tccagcaactgcagctccatgaacaaagaacagtctgattctaattctacaccccaaaat
atataa
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