KEGG   Sciurus carolinensis (gray squirrel): 124976868
Entry
124976868         CDS       T08117                                 
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncar03036]
    124976868
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    124976868
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C HMG_WDHD1 WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_EML eIF2A Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_TEP1_2nd HMG_box WDR90_beta-prop_4th Beta-prop_WDR75_2nd Ge1_WD40 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 124976868
NCBI-ProteinID: XP_047395847
LinkDB
Position
2:complement(155292159..155350459)
AA seq 1125 aa
MPAIQKPMRYGHTEGHTDVCFDESGSCIVTCGSDGDVRIWEDLDDDDPKSINVGEKAYSC
ALKNGKLVTAVSNNTVQVHTFPEGVPDGILTRFTTNANHVVFNEDGTKIAAGSSDFLVKI
VDVMDSSQQKTFRGHDAPVLSLSYDPKGVFLASASCDGSVRVWQISDQTCAISWPLLQKC
NDMMNAKSICRLAWQPKSGKLLAVPVEKSVKLYRRDTWSNQFDLSDSFISQTLSIVTWSP
CGQYLAAGSINGLILVWNVETKDCMERVKHEKGYAICGLAWHPTCGRISYTDAEGNLGLL
ENVCDASGKMSSRKVSSRVEEDYNDLFDGDNTSNAGDFLNDNAVEIPSFSKETINDDDDD
DLMLASSHARQRSHILEDDENSVDVTMLKTGLLKEEEEDDHTGSIHNLPLVTAQRPFYDG
LIPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATHLSN
ALNYTVADLSHEAILLACESTDELASKLHCLHFSSWDSSKEWIVDMPPNEDIEAICLGQG
WAAAATSALLLRLFTIGGVQKEIFSLPGPVVSMAGHGEQLFIIYHRGTGFDGDQCLGVQL
LELGKKKKQILHGDPLPLTRKSYLAWVGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPVCS
TREHCKGKSDHYWVIGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKIPFCQIATEKG
QMEEQFWRSVLFHNHLEYLAKNGYEYEESTKNQAIKEQQELLMKMLALSCKLEREFRCVE
LADLMTQNAVNLAIKYASRSRKLLLAQKLSELALEKAAELSATQTEEEEEEDFRKKLNSG
YSNTATEWSQPRPKNQIEEDAEDKEEADDTKEKTELHKHVQNSFSKGANSSDVPTIKSGA
VTSSNQGRVNPFKVLANSKEPAVSLNSTRSTNILDNMNKSSKKSSVLNRATNNERSPVIK
PLIPKPKSKQASAASYFQKRTSQASKTEEVEESPKNASSETPTVCPQNIENQRPKTGFQM
WLEENRSNIVSDNPDFSDEADIIKEGMIRFRVLSTEERKAWTNKAKGETPSDEAEGKKRK
RAVDESLEAENHKEAAKENMNLPKKQKPLDLSTNQKLSAFAFKQE
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgcctgctatacagaagccgatgagatatggacatacagaaggacacacggacgtctgt
tttgatgagtctgggagttgtattgtgacttgtggaagtgatggtgatgtgagaatttgg
gaagacttggatgatgatgatcctaagtctattaatgttggagaaaaggcatattcatgt
gctttgaagaatggaaaattggtcactgcagtttctaataatacagttcaagttcacaca
tttcctgaaggagttccagatggtatattgactcgcttcactacaaatgcaaatcatgtg
gtgtttaatgaggatggtactaaaattgctgctggatcaagtgattttctcgtcaaaatt
gtggatgtgatggatagcagtcaacagaagacatttcgaggacatgatgcccctgtttta
agtctttcttatgaccctaagggtgtcttcctggcatcggctagttgtgatggatctgtc
agagtttggcaaatttcagatcagacatgtgccattagttggccactgctacaaaaatgc
aacgatatgatgaatgcaaaatccatctgcagacttgcttggcagccaaaaagtgggaag
ttattggcagttcctgtggaaaaatctgtaaaattatatagaagagacacttggagtaat
cagtttgatctttcagatagtttcatctctcagaccctcagtatagtaacctggtctccc
tgtgggcagtacttagctgcaggtagtattaatggtttaattttagtttggaatgtggaa
accaaagactgcatggaaagggtgaaacatgagaaaggttatgcaatctgtggcctggcc
tggcatcctacttgtggtcgaatatcttatactgatgcagagggaaaccttgggctcctg
gaaaatgtatgtgatgccagtggaaagatgtcaagcaggaaggtatctagcagagtggaa
gaggattacaatgatctttttgatggtgataatacaagcaatgctggtgattttctaaat
gacaatgcagttgagatcccctctttttcaaaagagactataaatgatgatgacgatgat
gacctcatgctggcttcaagtcatgctagacaacgaagtcacatcctagaagatgatgaa
aattcagttgatgttacaatgctaaaaactggtcttctcaaagaggaggaggaagatgat
catacaggcagtattcacaatctaccacttgtaacagcccaaaggccattttatgatgga
ctcattccaactccccggcaaaagccattccagtcaggctctacacccttacatctcact
cacagattcatggtgtggaattctattggaattattcgctgttataatgatgaacaagac
aatgccatagatgtggaatttcatgatacctccatacaccatgcaacacatttgtcaaat
gctttgaattatacagtagcagatctttctcatgaagctattttgttggcatgtgaaagc
actgatgaactagcaagcaagcttcactgcctgcactttagttcctgggattcaagcaaa
gagtggatagtagacatgccaccgaatgaggatattgaagccatatgtctgggtcaggga
tgggctgccgccgccactagcgccttgctccttcgattgtttactattggaggtgttcaa
aaagagatcttcagccttcctggacctgtggtgtcaatggcaggacatggagaacagctt
ttcattatttatcacagaggtacaggatttgatggagatcagtgccttggagttcaacta
ctagagctggggaaaaagaagaaacaaattttacatggtgatcctcttcctcttacaagg
aaatcctaccttgcttgggttggtttttcagccgaaggtaccccctgttatgtggattct
gaaggctgtgttcgaatgcttaacagagggcttggtaatacctggactcctgtgtgtagc
accagagaacactgtaaaggaaagtctgaccactactgggttattggtatccatgaaaat
ccccagcaactgaggtgcatcccttgtaaaggttctcggtttcctcccactcttccacgc
cctgctgtagctatattatcctttaagattccattctgtcaaattgcaacagagaaagga
caaatggaggaacaattttggcgttcagttttatttcacaaccaccttgagtacttggct
aaaaatggttatgaatatgaagagagcactaaaaatcaagcaataaaagagcaacaggaa
cttttaatgaaaatgcttgcgctttcctgtaaactggagcgagaatttcgttgtgtggaa
cttgccgatctaatgactcaaaatgctgtgaatttagccattaaatatgcttctcgctct
cggaaattattattggcccaaaaacttagcgaacttgctctagagaaagcagctgaactg
tcagcaactcagacagaagaggaggaagaagaggatttcagaaaaaagctgaattctggt
tacagtaataccgctacagaatggagccagccaaggcccaaaaatcaaattgaagaagat
gctgaggacaaggaagaagctgatgatacaaaagaaaaaacagaactgcataaacatgtg
cagaactcattttccaaaggtgcaaattcctctgatgtgccaactattaagtcaggtgca
gttacctctagcaaccaaggacgagtaaatcccttcaaggtattagccaattccaaagag
ccagccgtatcattgaattcaacacgttcaactaatattttggacaatatgaacaaatca
tccaagaaatcttctgttcttaatagggcaacaaataatgaaaggtctccagttataaag
cctctgattccaaagccaaagtctaagcaggcatctgcagcatcctatttccagaaaaga
acttctcaagccagtaagactgaggaagtagaagaaagtcctaaaaatgcatcatctgaa
accccaactgtatgtcctcaaaacattgaaaatcaaaggccaaagactgggttccagatg
tggcttgaagaaaacagaagtaatattgtgtctgacaatcctgacttttcagatgaagca
gacataataaaagaaggaatgattcgatttagagtattatcaactgaagaaagaaaggca
tggactaacaaggccaagggagaaactccaagtgatgaagctgaaggaaagaagcgaaaa
cgtgcagttgatgaaagtcttgaagcagaaaaccacaaagaagcagcaaaggagaacatg
aatttgcctaaaaagcaaaaacctttagatctttctacaaatcagaagctgtcagcattt
gcatttaagcaggagtaa

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