Sciurus carolinensis (gray squirrel): 124976872
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Entry
124976872 CDS
T08117
Name
(RefSeq) target of EGR1 protein 1 isoform X1
KO
K13202
target of EGR1 protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124976872
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124976872
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Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
124976872
NCBI-ProteinID:
XP_047395866
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Position
1:complement(174810558..174818819)
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AA seq
510 aa
AA seq
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MAAGSDDGAASAPAASDGGINKCTKSGDDLVIHVPVVDVQSDNFKEMWPSLLLAIKTASF
VAVDTELSGLGDRKSLLNQCIEERYKAVCHAARTRSILSLGLACFKQQPDKGEHFYLVQV
FNLTLLCMEEYVIEPKSVQFLVQHGFNFNRQYAQGIPYHKGNDKGDESQSQSVRTLFLEL
IRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLCEMFPAGIYDTKYAAEFHARFT
ASYLEYAFRKCERENGKQRAAGNPHLALEFCNYPSSMRAHIDYRCCMTPTTHRPHPTSIC
DNFSAYGWCPVGPQCPRSHDIDLIIDTDEAVVEDKRRRRRRREKRRRALLSLPGTQTSGE
AEDGPPTKQVHGDSLKAEEIEQKVSEDDTKEQPASDQDHKNDLEKELKATRYETNDMATS
EVPECQASPNPVPGDGLHRAGFDAFMTGYVMAYVGVIQGPQPCNSEPWLPECHNKVYLSG
KAVPLTVAKSQFSRSSKAHNQKMKLAWGSS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggcagtgacgatggcgcagcttcagctccggcggcctcagacggtggtatc
aacaaatgcacaaaatctggggatgatttagtaatccacgttcctgtagtggatgtgcaa
agtgacaacttcaaggagatgtggccatccctcttgttggccataaagacagctagcttt
gtggcagtggacacggaactgagtgggcttggagacagaaagagtttgctgaaccagtgc
attgaggaacgttacaaggctgtgtgtcatgctgctaggacccgttctatcctctccttg
ggccttgcctgcttcaagcagcagcctgacaagggtgaacacttctacctggtccaggta
ttcaatcttaccctgctgtgcatggaggagtatgttatagaaccaaagtctgtgcagttc
ctggtgcagcatggcttcaacttcaatcggcagtatgcccagggcataccctaccataag
ggcaatgacaagggtgatgagagccagagccagtcagtgcggacactgttcctggagcta
atccgggcccgtcggccccttgtgctgcataatggccttatagacttggtgttcctgtac
cagaacttctatgcacacctgcctgagagcctgggaaccttcactgctgacctgtgtgag
atgttcccagcaggcatttatgataccaaatatgctgctgagtttcatgcccgcttcaca
gcctcctacttagaatatgcattccggaaatgtgagcgggaaaatgggaagcagcgggca
gctggcaacccacaccttgccctggagttctgcaactatccttcaagcatgagggcccat
attgactaccgctgctgcatgactcctacaactcaccgtcctcatcccaccagtatctgt
gacaacttctcggcctatggctggtgccccgtgggaccacagtgtcctcggtcccatgat
attgaccttatcattgacacggatgaagctgtggtagaggacaagcggcggcggcgacgt
cgtagggaaaaacgtaggagggctttgttgagcctgcctgggacacagacttctggggaa
gctgaggatggtcctcccacaaagcaggtccatggggacagtctcaaggctgaggaaatt
gagcaaaaagtgtctgaggatgatacaaaggagcagcctgcctctgatcaagatcacaaa
aacgacctggagaaggagcttaaagcaacaaggtatgaaacaaatgacatggctacctca
gaagtgccagagtgccaagccagtcctaacccagtgcctggggatggactgcaccgagct
ggttttgatgcctttatgacaggttatgtgatggcctatgtgggagtgatccagggaccc
cagccctgcaactctgaaccctggctacctgaatgtcacaacaaagtatatcttagtggc
aaagctgtccccctcacagtggccaagagccagttctcgcgttcctccaaagcccacaat
cagaagatgaagctggcttggggcagcagctga
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