Sciurus carolinensis (gray squirrel): 124977013
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Entry
124977013 CDS
T08117
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124977013
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124977013
Ion channels [BR:
ncar04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
124977013
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124977013
NCBI-ProteinID:
XP_047396129
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Position
2:78802226..78835108
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AA seq
468 aa
AA seq
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MAALESRLRALRLLLLVPLAAERWGPARAGQGAPGGLSELSFVAKHEDNLFKDLFQDYER
WVRPVEYLNDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWTDVKLRWNPDDYGGIKV
IRVPSDSLWTPDIVLFDNADGRFEGASTKAVVRYNGTVTWTQPANYKSSCTIDVTFFPFD
LQNCSMKFGSWTYDGSQVDIILEDQDVDRTDFFDNGEWEIVSAAGSKGNRTDSCCWYPYV
TYSFVIKRLPLFYTLFLIIPCIGLSFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIE
EIIPSSSKVIPLIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKL
PKLLCMRSHVDRYFTQREETESGSEPKSSRNTLEAALDSIRYITRHVMKENDVREVVEDW
KFIAQVLDRMFLWTFLLVSIVGSLGLFVPVIYEWANIIVPVHIGNTNK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggagtcccggctccgcgcgctccgccttctcctccttgttccgctggct
gctgagcgctggggtcccgcccgcgcggggcagggcgcgccgggaggattatctgaacta
tcctttgttgcaaaacatgaagacaatttgtttaaggatttatttcaagactatgaaaga
tgggttcgtcccgtggaatacctgaatgacaaaataaaaatcaagtttggccttgcaata
tctcaattagtggatgtggatgagaaaaatcagttaatgacaacaaatgtctggttgaaa
caggaatggacagatgtaaaattaagatggaaccctgatgactatggtggaataaaagtt
atacgtgtcccttcagactccctctggaccccagacatcgttttgtttgataatgcagac
ggacgttttgaaggggccagtacaaaagcagtcgtcaggtacaatggcactgtcacctgg
acacagccggcaaactacaaaagttcctgtactattgatgtcacatttttcccgtttgat
ctccaaaactgttccatgaaatttggctcttggacgtatgatggatctcaggttgatata
atcctagaggaccaagatgtagacaggacagatttttttgataatggagaatgggagatt
gtgagtgcagcggggagcaaaggaaacagaactgacagctgctgctggtacccttacgtc
acttactcctttgtaattaagcgactacctctcttttacaccttgttccttattataccc
tgtatcgggctctcattcctgacggtagttgtcttctatcttccttccaatgaaggtgaa
aagatcagtctgtgcacttcagtccttgtctctctgactgtcttccttctggttattgaa
gagatcataccctcatcttccaaagtaatacctctgattggagagtacctggtgtttacc
atgatttttgtgaccctatcaattatggtgactgtcttcgccatcaacattcaccatcgt
tcttcctcaacacacaatgctatggcaccctgggtccgcaagatatttcttcacaagctt
cccaaactgctttgcatgagaagtcatgtagacaggtatttcactcaaagagaggaaacc
gagagtggtagtgaaccaaaatcttctagaaacacattggaagctgctcttgattctatt
cgctacattacaagacatgtcatgaaggagaatgatgtccgtgaggttgttgaagattgg
aaattcatagcacaggttcttgaccggatgtttttgtggacttttcttctggtttcaatt
gttggatctctggggctttttgttcctgttatttatgaatgggcaaatataattgttcca
gttcacattggaaatacaaataagtga
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