KEGG   Sciurus carolinensis (gray squirrel): 124977175
Entry
124977175         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-1-like
  KO
K03347  cullin 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04110  Cell cycle
ncar04114  Oocyte meiosis
ncar04120  Ubiquitin mediated proteolysis
ncar04141  Protein processing in endoplasmic reticulum
ncar04310  Wnt signaling pathway
ncar04340  Hedgehog signaling pathway
ncar04350  TGF-beta signaling pathway
ncar04710  Circadian rhythm
ncar05170  Human immunodeficiency virus 1 infection
ncar05200  Pathways in cancer
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124977175
   04120 Ubiquitin mediated proteolysis
    124977175
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    124977175
   04340 Hedgehog signaling pathway
    124977175
   04350 TGF-beta signaling pathway
    124977175
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    124977175
   04114 Oocyte meiosis
    124977175
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    124977175
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124977175
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    124977175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncar04121]
    124977175
Ubiquitin system [BR:ncar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     124977175
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 IntS11_C
Other DBs
NCBI-GeneID: 124977175
NCBI-ProteinID: XP_047396479
LinkDB
Position
2:97840881..97843396
AA seq 770 aa
MSSNRSQNPHGLKQIGWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARG
AGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESMLKFYTQQWE
DYRFSSKVLNGICAYLNRHWVRRECDEGRKGICEIYSLALVTWRDCLFRPLNKQVTNAVL
KLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFY
TRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEIFH
TEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHXLAAIEKCGEAALNDPKMY
VQTVLDVHKKXNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYC
DSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEG
SMISELKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVLSSGSWP
FQQSCTFALPSELERSYQRFTAFYASHHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTF
QMAIVFQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPD
TLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIMRIMKMRKVLK
HQQLLGEVLTQLSSRFKPWVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgtcatcaaacaggagtcaaaatccccatggactgaagcagattggctgggatgacctc
agagctggaatccagcaagtgtacaccagacaaagcatggccaagtccagatacatggaa
ctctacactcacgtttataactactgtactagcgtgcaccagtcaaaccaagcacgggga
gctggcgtccctccttctaaatcgaaaaaggggcagacacctggaggggctcagtttgtt
ggcctggaactgtacaaacgacttaaggaatttttgaagaattacttgacaaatcttctt
aaggatggagaagacctgatggatgagagcatgctgaagttctacactcagcaatgggaa
gattaccgattttcaagcaaagtgttaaatggaatctgtgcctacctcaatagacattgg
gttcgccgtgaatgtgatgaaggacgaaaaggaatatgtgaaatctattcacttgcattg
gtgacttggagagattgtctgttcaggccattgaataaacaggtaacaaatgctgtttta
aaactgattgaaaaggaaagaaatggtgagaccatcaatacaagactgattagtggagtt
gtacagtcttatgtggaattggggctgaatgaagatgatgcatttgcaaagggccctacg
ttaacagtgtataaagaatcctttgaatctcaatttttggctgacacagagagattttat
accagagagagtactgaattcttgcagcagaacccagttactgaatatatgaaaaaggca
gaggctcgtctgcttgaggaacagcgaagagttcaggtctatcttcatgaaagcacacaa
gacgagctggccaggaaatgtgagcaggtcctcatcgaaaagcacttggaaattttccac
acagagtttcagaatttattggatgctgacaagaatgaagatttgggacgtatgtataat
cttgtgtctagaatccaggatggcctaggagagttgaaaaagctgctggagacacacatt
catnntcttgcagcaattgagaagtgcggtgaagctgccttaaatgaccccaaaatgtat
gtgcagacagtgctggacgtccataaaaagtaaaatgccctggtgatgtcggcgttcaac
aacgacgccggcttcgtggctgcgctcgacaaggcgtgtggtcgtttcataaacaacaat
gcggttaccaaaatggctcagtcgtccagtaaatcccctgagttgctggcgcgatactgt
gactccttgttgaagaagagttccaagaacccagaagaggcggaactagaagacacactc
aatcaagtgatggttgtcttcaagtacatagaagacaaggatgtgttccagaagttctat
gcaaagatgctggccaagagactcgtgcatcagaacagcgcgagcgacgatgccgaaggg
agcatgatctccgaactgaagcaagcgtgcggttttgagtacacctccaagcttcagcgg
atgttccaggacattggtgtgagcaaagatctgaatgagcagttcaaaaagcacctgacg
aattcagaacctctggacctggacttcagtatccaagtcctgagttccgggtcgtggccc
ttccagcagtcctgcacattcgccttgccctctgagttggaacgaagctatcagcggttc
acagctttctacgccagccaccacagtggcaggaaattgacatggttgtatcagttgtcc
aaaggagaattggtaactaactgcttcaagaacaggtacactctgcaggcatccacgttc
cagatggccattgtgttccagtacaacacggaggacgcctacaccgtgcagcagttgacg
gatagcacgcagatcaaaatggacattctggcacaggtgctgcagattttattgaagtcg
aagttactggtcctggaggacgaaaacgcaaatgttgacgaggtggagttgaagccggac
accttgataaagttataccttggctataagaataagaaattgagggttaacatcaacgtg
ccaatgaaaactgaacagaagcaagaacaagaaaccacacacaaaaacatcgaggaagac
cgcaaactcctgattcaggcggccatcatgaggatcatgaagatgaggaaggtcctgaag
caccagcagctgctcggcgaggtcctcactcagctgtcctccaggttcaagccttgggtc
ccagtgatcaagaaatgcattgacattctgattgagaaggaatatttggagcgagtcgat
ggtgaaaaggacacctacagttacttggcttaa

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