Sciurus carolinensis (gray squirrel): 124977188
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Entry
124977188 CDS
T08117
Name
(RefSeq) intraflagellar transport protein 52 homolog isoform X1
KO
K19681
intraflagellar transport protein 52
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124977188
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
124977188
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GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
Motif
Other DBs
NCBI-GeneID:
124977188
NCBI-ProteinID:
XP_047396504
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Position
2:complement(15390157..15427644)
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AA seq
446 aa
AA seq
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MVVTGPQVTMEKEVRSTILFNAYKKEVFTTNNGYKSMQKRLRSNWKIQNLKEEITSEKLI
GVKLWITAGPREKFTAAEFEVLKKYLDSGGDILVMLGEGGESRFDTNINFLLEEYGIMVN
NDAVVRNVYYKYFHPKEALVSNGVLNREISRAAGKTVPGIIDEESSGNNAQALTFVYPFG
ATLSVMKPAVAVLSTGSVCFPLNRPILAFYHSKNQGGKLAVLGSCHMFSDQYLDKEENSK
IMDVVFQWLTTGDIHLNQIDAEDPEISDYMMLPDTATLSERLRVCLQEGDENPRDFTTLF
DLSISQLDTASLPKVIKAHEQLNVKHEPLQLIQPQFETPLPALQPAVFPPSFRELPPPPL
ELFDLDETFSSEKARLAQITNKCTEEDLEFYVRKCGDILGVTSKLPKDQQDAKHILEHIF
FQVVEFKKLNQEHDIDTSEIAFQNNF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcactgggcctcaggtaaccatggagaaggaggttcggagcaccattcttttc
aatgcatacaaaaaggaggtatttaccaccaacaatggctataaatccatgcagaaaaga
cttcggagtaattggaagattcagaacttaaaagaggaaatcacatctgagaagctaatt
ggagtgaaactgtggattacagctgggccaagggaaaaatttactgcagctgagtttgaa
gttctgaagaagtaccttgacagtggtggggatatccttgtgatgctaggagaaggtgga
gaatccagatttgacaccaatattaattttctactagaagaatatggaatcatggttaat
aatgatgctgtggttagaaatgtatattacaagtatttccatcctaaggaagctctggtt
tccaatggagtattgaacagggaaattagccgagcagcaggaaaaacggtgcctggaatc
attgatgaggagagcagtgggaacaatgcccaggctctcacctttgtctatccttttggt
gccactttgagtgtcatgaaaccagcagtggctgttctgtccacaggctctgtctgcttc
ccacttaacagacccattctggctttctaccactcaaagaaccaaggtgggaagctggca
gtgcttggctcgtgtcacatgttcagtgaccagtatttggataaagaagaaaacagcaaa
atcatggatgttgttttccagtggctcacaacaggagacatccatctaaaccagattgat
gctgaagacccagagatctccgactacatgatgctacctgacacagccaccctgtcagag
cggctccgagtgtgtctccaggagggcgatgagaacccacgtgactttaccaccctcttc
gacctgtccatttcccagctggatacagcctccctccccaaggtcatcaaggctcatgag
cagctaaacgtgaagcatgaaccactccagctcatccaacctcagtttgagacgccactg
ccagcccttcagcctgcggtttttccccctagcttcagggagttaccacctcctcctctg
gaactgtttgacttagatgagacattctcatccgagaaagcacggcttgctcagatcacc
aataagtgtactgaagaggacctggaattctatgtgagaaagtgtggggacattcttgga
gtaaccagtaaactaccaaaggatcaacaggatgccaaacatatccttgagcacatcttt
ttccaagtggtggaattcaagaaattgaaccaggaacatgacatcgatacaagtgaaata
gcattccagaacaacttctga
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