Sciurus carolinensis (gray squirrel): 124977190
Help
Entry
124977190 CDS
T08117
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124977190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
124977190
NCBI-ProteinID:
XP_047396507
LinkDB
All DBs
Position
2:complement(105558111..105612979)
Genome browser
AA seq
1086 aa
AA seq
DB search
MRFFLLCVHMLLLMIPQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAIAVDRSAGPHQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCNAE
NEEDKKVISLQLDKDHHALYVAFSSCVIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGA
CGRVTPGMLLLTEDFFAFHNHSAGGYEQDIEYGNTAHLGDCHEILPTSTTPDYKIFGGPT
SDMEVSSSSVITVASIPEITPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGIPKGVR
WEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPSGDTKSMVMDHRGQPPE
LAALPTPESTPVLHQKTLQAMKSHSDKAHGHAASRKETPQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQSIDHPLTKSSGKRDHRRSVDSRNTLNDLLKHLN
DPNSNPKAIMGDIQMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPTMNRGGYMPTPTGA
KVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRP
LNKYTY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcttcctactttgtgtccacatgctgctcctgatgattcctcagttgagggct
gtcagctttcctgaagacgacgagcccctcaatactgtcgactatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaatgaatcgcagcacaggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtttatacagta
aacttaaatgaaatccccaaaacagaagtaataccaagcaagaaactgacatggcggtca
agacaacaggatcgagagaactgtgctatgaaaggcaaacataaagatgaatgccacaac
tttatcaaagtatttgttccaagaaatgacgagatggtttttgtttgtggtaccaatgca
ttcaatcctatgtgtaggtactataggttgaataccttagagtatgatggagaagaaatt
agtggcctggcaagatgcccatttgatgccagacaaaccaatgttgccctctttgctgat
gggaagctatattctgccacagtggctgacttcttggccagcgatgctgttatttatcga
agcatgggcgatggatctgcccttcgcacaataaaatatgattccaaatggataaaagag
ccacactttcttcatgccatagaatatggaaactatgtttatttcttctttcgagaaatt
gctgtagaacataataatttaggcaaggctgtctattcccgtgtggcccgcatatgtaaa
aacgacatgggtggctcccagcgggtcctggagaaacactggacatcatttctgaaggct
cggcttaactgttctgtccctggagattcgtttttctactttgatgttctgcagtctatt
acagacataatacaaatcaatggcatccccactgtggtcggggtgtttaccactcagctc
aacagcattcctggttcagcagtctgtgcatttagcatggatgacattgaaaaagtattc
aaaggacgattcaaagaacagaaaacaccagattctgtttggacagcagtccccgaagac
aaagttccaaaaccaaggcctggctgttgtgcaaaacatggccttgctgaagcttacaaa
acctccattgattttccggatgagaccctgtccttcatcaaatcccaccccctgatggac
tctgccgttccacctattgctgatgagccctggttcacaaagactcgggtcaggtacaga
ttgacagccatcgcggtggaccgttctgcagggccccaccagaactacacagtcatcttc
gttggctctgaagccggtgtggtacttaaagttttggcaaagaccagtcccttctctttg
aatgacagcgtattactggaagagattgaagcttacaaccatgcaaagtgcaatgctgag
aatgaagaagacaaaaaggtcatctcattacagctggataaagaccaccatgcattgtac
gtagcattctccagctgtgttatccgcatccccctgagccgctgcgagcgatatggatca
tgtaaaaagtcttgtattgcatctcgtgacccgtactgtggctggttaagccagggagcc
tgcgggagagtgaccccagggatgctgctgctaactgaagacttctttgctttccataac
cacagtgctggaggatatgaacaagacatagaatacggcaacaccgcccatctaggggat
tgccatgaaattttgcctacttcaactacaccagattacaaaatatttggcggtccaaca
tctgacatggaggtatcttcatcttctgttatcacagtggcaagtatcccagaaattaca
cccaaagtgattgatacctggagacctaaactgacgagctcccggaaatttgtagttcaa
gatgacccaaacacttctgattttactgatcctttatcgggtatcccaaagggtgtgcga
tgggaagtccagtctggagagtctaaccagatggtccatatgaacgtcctcatcacctgt
gtctttgctgcttttgttttgggggcattcattgcaggggtagcagtatactgctatcgt
gacatgtttgtccggaagaacagaaagatccataaagatgcagaatccgcccagtcatgc
acagactccagtggaagttttgccaaactgaatggtctctttgatagcccagttaaggaa
taccaacagaatattgattctcctaaactctatagcaacctgctgaccagtcggaaagag
ctgccacccagtggagatacaaaatccatggtgatggaccatcgaggccaacctccagag
ctggctgctctccccacaccggagtccactcctgtgcttcaccagaagaccctgcaggcc
atgaagagccattcagacaaggctcatggccatgcagcttcaaggaaagaaaccccccag
ttttttccttccagtcctccaccccactccccactaagtcatgggcacatccccagtgcc
attgttcttccaaatgctacccatgactacaatacatctttctcaaactccaatgctcat
aaagctgaaaagaagcttcaaagtattgatcaccctcttacaaagtcatcaggtaagaga
gatcaccggcgttctgtggattccagaaataccctcaatgatctcctgaaacatctaaat
gaccccaacagtaaccccaaagccatcatgggagacatccaaatggcccaccagacccta
atgctggatcctgtgggacctatgtctgaggtcccacccaaggtccccaacagggaggca
tcactctattcacctccttcaacgctccccaggaatagtccaaccaagcgagtggacgtc
cccaccactcctggggtcccaatgacttctctggaaagacaaaggggttatcacaaaaat
tcttcccagaggcactctatatctgctatgcctaaaaacttaaactcaccaaatggtgtt
ttgttatctagacagcctactatgaaccgtggaggatacatgcccacccccacgggggcg
aaggtggactatattcaggggacacccgtgagtgttcatctgcagccttccctctccaga
cagagcagctacaccagtaatggcacccttcccaggacgggactaaagaggacaccgtcc
ttaaaacctgatgtgccaccaaagccttcctttgttcctcaaaccacgtctgtcagacca
ctgaataaatacacttactag
DBGET
integrated database retrieval system