KEGG   Sciurus carolinensis (gray squirrel): 124977190
Entry
124977190         CDS       T08117                                 
Name
(RefSeq) semaphorin-6D isoform X1
  KO
K06842  semaphorin 6
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    124977190
SSDB
Motif
Pfam: Sema PSI
Other DBs
NCBI-GeneID: 124977190
NCBI-ProteinID: XP_047396507
LinkDB
Position
2:complement(105558111..105612979)
AA seq 1086 aa
MRFFLLCVHMLLLMIPQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAIAVDRSAGPHQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCNAE
NEEDKKVISLQLDKDHHALYVAFSSCVIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGA
CGRVTPGMLLLTEDFFAFHNHSAGGYEQDIEYGNTAHLGDCHEILPTSTTPDYKIFGGPT
SDMEVSSSSVITVASIPEITPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGIPKGVR
WEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPSGDTKSMVMDHRGQPPE
LAALPTPESTPVLHQKTLQAMKSHSDKAHGHAASRKETPQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQSIDHPLTKSSGKRDHRRSVDSRNTLNDLLKHLN
DPNSNPKAIMGDIQMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPTMNRGGYMPTPTGA
KVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRP
LNKYTY
NT seq 3261 nt   +upstreamnt  +downstreamnt
atgaggttcttcctactttgtgtccacatgctgctcctgatgattcctcagttgagggct
gtcagctttcctgaagacgacgagcccctcaatactgtcgactatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaatgaatcgcagcacaggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtttatacagta
aacttaaatgaaatccccaaaacagaagtaataccaagcaagaaactgacatggcggtca
agacaacaggatcgagagaactgtgctatgaaaggcaaacataaagatgaatgccacaac
tttatcaaagtatttgttccaagaaatgacgagatggtttttgtttgtggtaccaatgca
ttcaatcctatgtgtaggtactataggttgaataccttagagtatgatggagaagaaatt
agtggcctggcaagatgcccatttgatgccagacaaaccaatgttgccctctttgctgat
gggaagctatattctgccacagtggctgacttcttggccagcgatgctgttatttatcga
agcatgggcgatggatctgcccttcgcacaataaaatatgattccaaatggataaaagag
ccacactttcttcatgccatagaatatggaaactatgtttatttcttctttcgagaaatt
gctgtagaacataataatttaggcaaggctgtctattcccgtgtggcccgcatatgtaaa
aacgacatgggtggctcccagcgggtcctggagaaacactggacatcatttctgaaggct
cggcttaactgttctgtccctggagattcgtttttctactttgatgttctgcagtctatt
acagacataatacaaatcaatggcatccccactgtggtcggggtgtttaccactcagctc
aacagcattcctggttcagcagtctgtgcatttagcatggatgacattgaaaaagtattc
aaaggacgattcaaagaacagaaaacaccagattctgtttggacagcagtccccgaagac
aaagttccaaaaccaaggcctggctgttgtgcaaaacatggccttgctgaagcttacaaa
acctccattgattttccggatgagaccctgtccttcatcaaatcccaccccctgatggac
tctgccgttccacctattgctgatgagccctggttcacaaagactcgggtcaggtacaga
ttgacagccatcgcggtggaccgttctgcagggccccaccagaactacacagtcatcttc
gttggctctgaagccggtgtggtacttaaagttttggcaaagaccagtcccttctctttg
aatgacagcgtattactggaagagattgaagcttacaaccatgcaaagtgcaatgctgag
aatgaagaagacaaaaaggtcatctcattacagctggataaagaccaccatgcattgtac
gtagcattctccagctgtgttatccgcatccccctgagccgctgcgagcgatatggatca
tgtaaaaagtcttgtattgcatctcgtgacccgtactgtggctggttaagccagggagcc
tgcgggagagtgaccccagggatgctgctgctaactgaagacttctttgctttccataac
cacagtgctggaggatatgaacaagacatagaatacggcaacaccgcccatctaggggat
tgccatgaaattttgcctacttcaactacaccagattacaaaatatttggcggtccaaca
tctgacatggaggtatcttcatcttctgttatcacagtggcaagtatcccagaaattaca
cccaaagtgattgatacctggagacctaaactgacgagctcccggaaatttgtagttcaa
gatgacccaaacacttctgattttactgatcctttatcgggtatcccaaagggtgtgcga
tgggaagtccagtctggagagtctaaccagatggtccatatgaacgtcctcatcacctgt
gtctttgctgcttttgttttgggggcattcattgcaggggtagcagtatactgctatcgt
gacatgtttgtccggaagaacagaaagatccataaagatgcagaatccgcccagtcatgc
acagactccagtggaagttttgccaaactgaatggtctctttgatagcccagttaaggaa
taccaacagaatattgattctcctaaactctatagcaacctgctgaccagtcggaaagag
ctgccacccagtggagatacaaaatccatggtgatggaccatcgaggccaacctccagag
ctggctgctctccccacaccggagtccactcctgtgcttcaccagaagaccctgcaggcc
atgaagagccattcagacaaggctcatggccatgcagcttcaaggaaagaaaccccccag
ttttttccttccagtcctccaccccactccccactaagtcatgggcacatccccagtgcc
attgttcttccaaatgctacccatgactacaatacatctttctcaaactccaatgctcat
aaagctgaaaagaagcttcaaagtattgatcaccctcttacaaagtcatcaggtaagaga
gatcaccggcgttctgtggattccagaaataccctcaatgatctcctgaaacatctaaat
gaccccaacagtaaccccaaagccatcatgggagacatccaaatggcccaccagacccta
atgctggatcctgtgggacctatgtctgaggtcccacccaaggtccccaacagggaggca
tcactctattcacctccttcaacgctccccaggaatagtccaaccaagcgagtggacgtc
cccaccactcctggggtcccaatgacttctctggaaagacaaaggggttatcacaaaaat
tcttcccagaggcactctatatctgctatgcctaaaaacttaaactcaccaaatggtgtt
ttgttatctagacagcctactatgaaccgtggaggatacatgcccacccccacgggggcg
aaggtggactatattcaggggacacccgtgagtgttcatctgcagccttccctctccaga
cagagcagctacaccagtaatggcacccttcccaggacgggactaaagaggacaccgtcc
ttaaaacctgatgtgccaccaaagccttcctttgttcctcaaaccacgtctgtcagacca
ctgaataaatacacttactag

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