Sciurus carolinensis (gray squirrel): 124977198
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Entry
124977198 CDS
T08117
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00510
N-Glycan biosynthesis
ncar00513
Various types of N-glycan biosynthesis
ncar01100
Metabolic pathways
ncar04141
Protein processing in endoplasmic reticulum
Module
ncar_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
124977198
00513 Various types of N-glycan biosynthesis
124977198
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124977198
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GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
HSM3_N
DUF5859
Motif
Other DBs
NCBI-GeneID:
124977198
NCBI-ProteinID:
XP_047396540
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Position
2:complement(20964882..21020649)
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AA seq
647 aa
AA seq
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MAPPGSSTVFLLALTIIASTQALTPTHYLTKHDVERLKASLDRPFTSLESAFYSIVGLSS
LGAQVPDVKKACTFIKSNLDPSNVDSLFYAAQSSQALSGCEISISNETKDLLLAAVSEDS
SVAQIYHAVAALSGFGLPLASQEALGALTARLGKEETVLATIQALQTASYLSQQADLRNI
VEEIEDLVARLDELGGVYLQFEEGLETTALFVAATYRLMDHVGTAPSIKEDQVIQLMNTI
FSKKNFESLSEAFSVACAAAALSQNRYHVPVVVVPEGPASATHEQAILRLQVTNVLSQPL
TQATVKLEHAKSVASRAVVLQRTFFTLVGDVFELNFVNVKFSSGYYDFSVKVEGDNRYVA
NTVELRVKISTEVGITNVDLSTVDKDQSIAPKTTRVTYPAKAKGTFIADSHQNFALFFQL
VDVNTGAELTPHQTFVRLHNQKTGQEVVFVAEPDNKNVYKFELDTSERKIEFDSASGTYT
LYLIIGDATLKNPILWNVADIVIKFPEEEAPSTVLSQNLFTPKQEIQHLFREPEKRPPTV
VSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAAMLGLMYVYWTQLNMF
QTLKYLAILGSVTFLAGNRMLAQQAVKRIAAEQSSRLAKYRTLRTAH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgggttcaagcactgtcttcctgttggccctgacaatcatagccagcacc
caggctctgacgcccactcactacctcaccaagcatgacgtggagagactgaaagcttcg
ctggaccgccccttcacaagtttggaatctgccttctactccattgtgggactcagcagc
cttggggcccaggtgccagatgtaaagaaagcgtgcaccttcatcaaatctaacctcgat
cccagcaacgtggattccctcttctatgctgcccagtccagccaggccctctcagggtgt
gagatttctatttcaaatgagaccaaagatctgcttctggcagctgtcagcgaagactcg
tctgttgcccagatctaccatgcagtcgcagccctcagtggctttggccttcccttggca
tcccaggaagcactcggggccctcactgctcgcctaggcaaggaagagaccgtgctggca
acaatccaggctctgcagacagcatcctatctgtcccagcaagctgacctgaggaacatt
gtggaggagattgaggacctcgttgctcgcctggatgaactgggaggtgtgtatctccag
tttgaagaaggattggaaaccacagcgttatttgttgctgccacctacaggctcatggac
cacgtggggactgcgccatccattaaggaggaccaggtcatccaactgatgaacacaatc
tttagcaagaagaactttgagtcactctcggaagctttcagtgtggcctgtgctgctgct
gcactctcccagaatcgctaccatgtaccagttgtggttgtgcctgagggcccagcttct
gccactcacgaacaggctatcctgcggttgcaagtcaccaatgttctgtcgcagcctctg
actcaggccactgttaagctagaacatgccaagtctgttgcttccagagccgttgtcctc
caaaggacgtttttcacccttgtaggggatgtttttgaactgaacttcgtgaatgtcaaa
ttttccagtggttattatgacttctccgtcaaggttgaaggtgacaaccgttatgttgca
aacactgtcgagctcagagtcaagatctccactgaagttggcatcacaaatgtcgatctg
tccactgtggataaggatcagagcattgcacccaaaaccacccgggtgacctacccagcc
aaagccaagggcacattcatcgcggacagccaccagaacttcgctttgttcttccagctg
gtggatgtgaacactggtgctgaactcacccctcaccagacgtttgtccgactccataac
cagaagactggccaggaagtggtgtttgttgctgagccagacaacaagaatgtgtacaag
ttcgaactggacacctctgaaagaaagatcgagtttgactctgcctcgggcacctacact
ctctacttaatcattggagatgccactttgaagaacccaatcctctggaatgtggctgac
attgtcatcaagttccctgaagaagaagctccctcaactgtcctatcccagaatcttttc
actccgaaacaggaaattcagcacctgttccgagagcctgagaagagacctcccaccgtg
gtgtccaatactttcacagccctcatcctctcacccttgctcctgctctttgctctgtgg
atccggattggtgccaatgtctccaacttcacttttgctcctagcacgattatctttcac
ctgggacatgctgctatgctggggctcatgtatgtctattggactcagctcaacatgttc
cagaccttgaagtacctagccatcctgggcagtgtgacatttctggctggcaatcggatg
ttggcccagcaggcagtcaagaggatcgctgcagagcagagcagtagattggcaaaatat
aggacactacgaacagcacattag
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