Sciurus carolinensis (gray squirrel): 124977225
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Entry
124977225 CDS
T08117
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124977225
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124977225
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
Cys_Knot_tox
DUF240
Motif
Other DBs
NCBI-GeneID:
124977225
NCBI-ProteinID:
XP_047396602
EnsemblRapid:
ENSSCRG00010003772
LinkDB
All DBs
Position
2:142718784..142986547
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AA seq
719 aa
AA seq
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MEKFLFYLFFIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASSSNGDTKMSQDK
IVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLAAGT
MYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQIQGCSVTLPQSVSKQAVGHEENA
QCCKVANDSVIQSSETCTSQDSSTTTSALPPTWTSSTSVSQKQKRKTGTKPSTEPQNEAV
TNVESQNTNRNNSTALQLTSRPPDSITEGPTSKRAHTKPNALLTNVDQNVHETQRLELI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttcttttttatctgtttttcattggcatagcagtgagagctcagatctgt
ccaaagcgttgtgtctgtcagattttgtctcctaatcttgcaaccctttgtgccaagaaa
gggcttctatttgttccaccaaacattgacagaagaactgtggaactgcggttggcagac
aattttgttacaaatatcaaaagaaaagattttgccaatatgaccagcttggtggacctg
actctatccaggaatacaatcagttttattacacctcatgcttttgctgacctacggaat
ttgagggctctgcatttgaatagcaacagattgactaaaatcacaaatgacatgttcagt
gggctttccaatctccatcatttaatattgaacaacaatcaactgactttaatttcttct
acagcatttgatgatgtttttgcccttgaggagctggatctgtcctacaataatctagaa
actattccttgggatgctgttgagaagatggttagtttgcacactcttagcttggatcac
aatatgattgataacattcctaagggaactttctcccacttgcacaagatgactcggcta
gatgtaacatcaaataaattgcagaagctaccacctgaccctctctttcagcgagctcag
gtcctagcaacctcaggaatcataagtccatctacatttgcactgagttttggtggaaac
cccttgcattgcaattgtgaattgctgtggttaaggcgtttgtctagagaagatgatctg
gagacctgtgcttctcctgcacttttaactggtcgctatttttggtcaattcctgaggaa
gagtttttgtgtgagcctcctctcattactcgtcatacacatgagatgagggtcttagag
gggcaaagggcaacactgaggtgcaaagccaggggagaccccgaacccgcaattcactgg
atttctcctgaagggaagcttatttcaaatgcaacaagatcactggtatatgataatgga
acacttgatattcttataacaactgtaaaagacacaggtgcttttacctgtattgcttcc
aatcctgccggggaagcaacacaaacagtggatcttcatataattaagctccctcaccta
ttaaacagtacaaaccatatccatgagccggatcctggttcttcagatatctcaacttct
actaagtcaggttctaatgcaagcagtagtaatggcgatactaaaatgagtcaggataaa
attgtggtggcagaagcaacttcgtctacagcacttcttaaatttaattttcaaagaaat
attcctggaatacgtatgtttcaaatccagtacaatggtacttacgatgacacccttgtt
tacagaatgatacctcctacgagcaaaacttttctggtcaataatctggctgctggaact
atgtatgacttgtgtgtcttggccatatatgacgatggcatcacttccctcactgccaca
agagtcgtgggctgcatccagtttactacggaacaggattatgtccgttgccatttcatg
cagtcccagtttttgggaggcaccatgattataattattggtggaataattgtagcgtcc
gtgctggttttcatcatcattctaatgatccggtataaggtttgtaacaataatgggcaa
cacaaggtcaccaaggttagcaatgtttattctcaaacgaatggggctcaaatacaaggc
tgtagtgtaacactgccccagtccgtgtctaagcaagctgtgggacatgaagagaatgcc
cagtgttgtaaagttgccaatgacagtgtgattcaatcttcagaaacttgtacgagtcag
gactcttctaccactacctctgctttgcctcctacctggacttcaagcacgtctgtgtcc
caaaagcagaaaagaaagactggcacgaagcccagtaccgaaccacagaatgaagctgtc
acaaatgtagagtcccaaaacactaacaggaacaactcaactgccttgcagttgactagc
cgacctcctgattctatcacagaggggcccacatctaaaagagcacataccaagccaaat
gctttgctgactaatgttgaccagaatgtccacgaaacacagaggctggagttaatctga
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