Sciurus carolinensis (gray squirrel): 124977231
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Entry
124977231 CDS
T08117
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2 isoform X1
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05200
Pathways in cancer
ncar05202
Transcriptional misregulation in cancer
ncar05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124977231
05202 Transcriptional misregulation in cancer
124977231
09162 Cancer: specific types
05211 Renal cell carcinoma
124977231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124977231
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124977231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
124977231
NCBI-ProteinID:
XP_047396611
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Position
2:50461547..50639902
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AA seq
717 aa
AA seq
DB search
MATPAAVNPPEMASDIPGSVTLPVAPMAATGQVRMAGAMPARGGKRRSGMDFDDEDGEGP
SKFSRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTG
NKSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFG
STLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICR
MRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEED
ADVGQGSKYCLVAIGRLQVTSSPVCMDMNGMSVPTEFLSRHNSDGIITFVDPRCISVIGY
QPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWMLIRTSSFTF
QNPYSDEIEYIICTNTNVKQLQQQQAELEVHQRDGLSSYDLSQVPVPNLPAGVHETGKTV
EKADAIFSQERDPRFAEMFAGISASEKKMMNSASAAGTQQIYSQGSPFPPGHSGKAFSSS
VVHVPGVNDIQSSSSTGQNMSQISRQLNQSQVAWTGSRPPFPGQQIPSQSSKTQSSPFGI
GTSHTYPADPSSYSPLSSPATSSPSGNAYSSLANRTPGFAESGQSSGQFQGRPSEVWSQW
QSQHHGQQSGEQHSHQQPGQTEVFQDMLPMPGDPTQGTGNYNIEDFADLGMFPPFSE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccggcggcggtaaatcctccggaaatggcttcagacatacctggatcagtg
acattgcctgttgcccccatggcggccactggacaggtgaggatggcaggggccatgcct
gcccgtggaggaaagcggcgttccggaatggactttgatgatgaagatggcgaaggtccc
agtaaattttcaagagagaatcacagtgagattgaacggcgcaggcggaacaagatgacc
cagtacatcacagagctctctgacatggtccctacctgcagtgcgctggcccggaagcca
gacaagctcaccatcctccgcatggctgtctcacacatgaagtccatgcggggcacaggg
aacaagtctactgatggcgcatacaaaccttccttcctcaccgagcaggaactgaagcat
ctcatcttggaagcagctgatggatttctgtttgtagtggcagctgaaacagggcgagtg
atatacgtgtctgactctgtcacccctgttctcaaccagccccagtcagagtggtttggg
agcaccctttatgaacaggtgcatcctgacgatgtggagaagctgagagagcagctgtgc
acctcagaaaattccatgacaggccgaatcctggatctgaagacggggacagtcaagaag
gaagggcagcagtcatccatgaggatgtgcatgggctcacggcgctccttcatatgcaga
atgaggtgtggaaatgctcctttggaccaccttcctcttaacagaataaccaccatgagg
aaaaggttcaggaatggtcttggccctgtaaaagaaggagaagcccagtatgcagtggtc
cactgcacaggatacatcaaagcttggccaccagcaggaatgacaatacctgaagaagat
gctgatgtgggacaaggcagtaaatactgccttgtggcaattgggagactccaggtgacc
agctctcctgtctgcatggatatgaatgggatgtcagtgcccacagagttcttatctcgt
cataactctgatggaatcatcacatttgtggatccaagatgcatcagtgtgattggctac
caaccccaggatcttctgggaaaggatattttggagttctgccatcctgaggatcagagc
catctgcgtgagagcttccagcaggtggttaagctgaaaggccaagtactgtcggtcatg
tatcgattccgcacgaagaaccgcgagtggatgctgatccgcaccagcagcttcacattc
cagaacccttattctgatgagatcgagtacatcatctgtaccaacaccaacgtcaagcaa
cttcagcaacagcaggcagaattggaagtgcatcagagagatgggttgtcatcatatgac
ttatctcaggtccctgtacccaacctacctgctggtgttcacgagactgggaagactgta
gaaaaggcagatgcaatcttctcccaagaaagagacccccggtttgctgaaatgtttgca
ggaatcagtgcatcggagaagaagatgatgaattcagcctctgcagcaggaacccagcag
atctactctcaaggaagcccgttccctcccggtcactcggggaaagccttcagctcctca
gtggttcatgtgcctggagtgaatgatattcagtcctcctcctcaacaggccagaacatg
tcccagatctcccggcaactaaaccagagtcaggtggcatggacagggagtcgtccaccc
tttccaggacagcaaatcccatctcagtccagcaagacccagtcatctcccttcgggatt
ggaaccagccacacctacccggcagacccctcttcctacagtcctctctccagtccagct
acctcctcgcccagcgggaatgcctactccagtcttgccaacaggactccagggttcgct
gagagtggacaaagtagcgggcagttccaggggaggccctcggaagtctggtcacagtgg
cagagccagcaccacggccagcagagcggtgagcagcactcccaccagcagcccggtcag
actgaagtgttccaggacatgctgccaatgccaggagatcccacccaggggactggcaac
tataatatcgaagactttgctgacctgggcatgttcccaccattttctgagtaa
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