Sciurus carolinensis (gray squirrel): 124977341
Help
Entry
124977341 CDS
T08117
Name
(RefSeq) tubulin polyglutamylase TTLL5 isoform X1
KO
K16602
tubulin polyglutamylase TTLL5 [EC:
6.3.2.61
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124977341
04812 Cytoskeleton proteins [BR:
ncar04812
]
124977341
Enzymes [BR:
ncar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
124977341
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
124977341
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
124977341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Sua5_C
Motif
Other DBs
NCBI-GeneID:
124977341
NCBI-ProteinID:
XP_047396772
LinkDB
All DBs
Position
2:173846241..174112484
Genome browser
AA seq
1355 aa
AA seq
DB search
MPVVMARDLEETASSSEDEEVVSQEDHPCIMWTGGCRRIPVLVFHAEAILTKDNNIRVIG
ERYHLSYKIVRTDSRLVRSILTAHGFHEVHPSSTDYNLMWTGSHLKPFLLRTLSEAQKVN
HFPRSYELTRKDRLYKNIIRMQHTHGFKAFHILPQTFLLPAEYAEFCNSYSKDRGPWIVK
PVASSRGRGVYLINNPNQISLEENILVSRYINNPLLIDDFKFDVRLYVLVTSYDPLVIYL
YEEGLARFATVRYDQGAKNIRNQFMHLTNYSVNKKSGDYVSCDDPEVEDYGNKWSMSAML
RYLKQEGRDTTALMAHVEDLIIKTIISAELAIATACKTFVPHRSSCFELYGFDVLIDSTL
KPWLLEVNLSPSLACDAPLDLKIKASMISDMFTVVGFVCQDPAQRASTRPIYPTFESSRR
NPFQKSQRPVSAQFQSSYTKQRSRPLSASDAEMKNLVGSAREKLPGKLCGSVLGLSMEEI
KVLRRVKEENDRRGGFIRIFPTSETWEIYGSYLEHKTSMNYMLATRLFQDRGNPRRSLLT
GRTRMTVDGAPELKVESVNSKAKLHAALYERKLLSLEVRKRRRRSGRLRAVRPKYPVITQ
PAEMNVKTETESEEEEEVALDNEDEEQEASQEESAGSLGENQTKYSPSLTVMVENSSKDN
SMKVSEWNNKGEQCCKIDTQEPEPKFNLMQILQDNGNLSKVQARIAFSAYLQHVQVRLTK
DSGSQTLSASWAAKEDEQMELVVRFLKRASSNLQHSLRMVLPSRRLALLERRRILAHQLG
DFIIVYNKETEQMAEKKSKKKLEEEEEDGVNTENFQDFIRRASEAELEEVLTFYTQKNKS
ASVFLGTHSKSSKNSSSYSDSGAKGDHPETIQEVKIKQPKQQQATEIHSDKLSRFTTSAE
KEAKLVYTNCTSASFSGPAATLLQKIPNTHLSSIMTTSALSPGPGHHSTLSHIPQAIPTM
PHQPAVLLNPVPDNASSSIHPGTQNIPSPAGLPRCRSGSYTIGPFSSFQSAAHIYSQKLS
RPSSAKAAGSCHPNKHHSGVAKMQKEGEDGSSYGKRYSQSMVTAELQRLAEKQAARQYSP
ASHISLLTQQVTNLNLASGVLNRSSASTPPSLRPAISPSGPTWSMQSDPHAPENRSSPPG
SRSLQTGGFAWEGEVENNAYSKATGVAPQHKYHPTAGSYQLHFALQQLEQQKLQSRQLLD
QSRARHQAIFGSQTLPNSNLWTMNNGAGCRISSATASGQKPTTLPQKVVPPPSSSSSLVP
KPPSNHKQVLRKATSQRASKGASAEGQLNGLQSSLNSAAFMPITSSTGSLEAPQVIFARS
KPLPTQSGALATGIGQRKTKSVKSGPIEDPAHTNR
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcgtgatggcccgggacctggaggaaacagcatcttcctcagaggatgaggag
gtggtaagccaagaggatcatccatgtatcatgtggactggaggctgcaggagaattcca
gttttggtattccatgctgaggctattctgacaaaggacaacaatattcgagtaattgga
gaacgttatcatttgtcttataagattgtgcgaacggacagtcgcctggtacgcagcatt
ctgacagcccatggatttcatgaagttcacccaagcagcactgactataacttgatgtgg
acaggatcccacctgaagcccttcttacttcgcaccctctctgaagcacaaaaggttaat
cactttcccaggtcttatgaactaacacggaaggaccgactgtacaaaaacatcattcga
atgcagcatacgcatggattcaaggctttccacatcctccctcagaccttcctcctgcca
gctgagtatgcggaattctgtaattcatattcaaaggaccggggaccttggatagtaaaa
ccagtggcctcttctagggggcggggcgtctacctgatcaacaatccaaaccagatttcc
ctggaagagaacatcctggtctcccgttacattaacaaccccctgctcatagatgatttc
aagttcgacgtgcgcctctatgtgctcgtgacttcctatgatcctctggtcatctatctc
tatgaagaagggctggccaggtttgccactgtgcgatacgaccaaggagccaagaacatt
cggaaccagttcatgcacctgacaaactacagcgtgaacaagaagagtggagactatgtg
agttgtgatgatccagaagtggaggattatgggaacaaatggagcatgagtgctatgctt
aggtacctgaaacaggaaggcagagacacaactgcattgatggcccacgtggaagacctg
atcatcaagactatcatctctgctgagctagctattgctacagcttgtaaaacctttgtc
cctcatcgcagcagctgttttgaactatatggctttgatgtgctcatagattctactctg
aagccatggttgttggaagtgaatctctctccttctttggcctgtgatgcacctctggac
ctaaaaattaaagccagtatgatttcagatatgttcactgttgtaggatttgtgtgccaa
gatcctgcccagcgggcatctactcggccaatttatcccaccttcgagtcttccaggcga
aaccctttccagaaatctcagcgcccagtatctgcacagtttcagtcatcatataccaag
cagcgttcccgtccactctctgccagtgatgcggaaatgaaaaaccttgtgggctcagcc
cgggagaagctgccagggaagctgtgtggttctgtgcttggcttatcaatggaggagatc
aaagttttacggagggtaaaggaagaaaatgatcggagaggtggatttattcgcatattt
cctacatccgagacatgggaaatatatgggtcctaccttgagcacaaaacctccatgaac
tacatgctggcaacacgtctcttccaggacaggggaaacccaagaagaagcttattgaca
ggaagaacacggatgactgtggatggggcaccagaactgaaggtagagagtgtgaattca
aaggccaagctgcatgctgctctttacgagagaaagctcctgtctctggaggtgcgaaaa
cgtagaagacggagtggcagattgagggcagtgaggccaaaatacccagtgattacccaa
ccagctgaaatgaatgttaaaactgagacagagagtgaagaggaggaagaagttgcatta
gacaatgaagatgaagagcaggaagcttcccaggaggagtctgcagggtctcttggagaa
aatcaaaccaaatattcaccctcattaactgtgatggtagaaaattcatccaaagacaat
tccatgaaggtttccgaatggaataataaaggtgaacagtgctgcaaaatcgatactcag
gaaccagagcctaagttcaacctgatgcagattctgcaagataatggaaatctaagcaaa
gtgcaggcccgaatagcattctctgcctatctccagcatgttcaagttcgcctgacgaag
gacagtggaagtcagaccctcagtgccagttgggctgccaaagaggatgaacagatggag
ctggttgttcgttttcttaaacgagcatcaagtaacctccagcattcactgaggatggta
ttacctagtcgacgattggcacttctagaacgcagaagaatcctcgcccaccaactaggt
gactttatcattgtgtacaacaaggaaacagaacaaatggctgaaaagaaatcaaagaag
aaacttgaagaagaggaggaagatggggtgaatacagaaaactttcaggatttcatcaga
cgagcaagtgaggctgagttggaggaggtattgactttttatactcaaaaaaacaagtct
gcaagtgtcttcctggggacccactctaaaagttctaagaacagcagcagttattcagat
agtggggcaaaaggtgatcaccctgagacaatacaagaagtgaaaataaagcaacccaaa
cagcaacaggcaacagaaattcactctgataaattatctcgatttaccacttcagcagaa
aaagaggctaaattagtctataccaattgtacctctgcttctttctctggccctgctgct
actcttctgcagaaaattcccaacacccatctgtcatctattatgacaacctctgccctc
tcgccagggcctggccaccattctactttatctcacattcctcaagccatccccaccatg
cctcatcagccagcagttttactgaacccagtccctgacaatgcttcttcctccatacat
cctgggacacagaacataccaagccccgctggcctgccgcgctgtcgatcaggcagttac
accattggccccttttcctctttccaaagcgctgcacacatctatagccagaaactgtct
cgtccctcttcagccaaggcagcaggttcatgccatccaaacaagcatcattcaggagta
gccaaaatgcagaaagagggagaagatggttcttcatacggcaaacggtacagccaaagt
atggtgacggctgaacttcaacgacttgccgagaagcaggcagcaaggcagtattctcca
gccagccacatcagtctcctcacccagcaggtaacaaacctgaatttggcaagtggcgtc
ctaaacagaagcagtgcttcaacgccccccagcctccgacctgccatcagtcctagtggt
ccgacatggtccatgcagtcagacccccacgcgccagagaaccgctccagcccccctgga
agcaggagcctccaaacaggtggctttgcctgggagggcgaggtagagaacaacgcgtat
agcaaggctacaggggtggctccccagcacaagtaccaccccacagcgggcagttaccaa
ctccattttgctctccagcaacttgaacaacagaaacttcagtcccggcagcttctggac
cagagtcgagcccggcaccaggcgatctttggcagccagacactacctaactccaattta
tggacaatgaataatggtgcaggctgcagaatttcaagtgccacagctagtggccagaag
ccaaccactctgccacagaaagtggtgccacctccaagttcttcctcctccctggtcccc
aaacccccatctaatcacaaacaagtgctcagaaaggccacatcccagagggcctcaaaa
ggggcctccgccgaagggcagctgaacggactccagagcagccttaactctgcagccttt
atgcccatcaccagctccacaggatctttggaagctccccaagttattttcgccagatcc
aaacccttgcccacacaatctggagcccttgctacaggtataggacagagaaaaacaaag
tcggtgaagtcagggccaattgaagatcctgctcacactaacagatga
DBGET
integrated database retrieval system
