Sciurus carolinensis (gray squirrel): 124977381
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Entry
124977381 CDS
T08117
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03082
ATP-dependent chromatin remodeling
ncar05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124977381
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124977381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124977381
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124977381
GBAF(ncBAF) complex
124977381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
124977381
NCBI-ProteinID:
XP_047396848
LinkDB
All DBs
Position
2:complement(1619050..1644695)
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDAISTGLPPASLMQ
GQIGNGPSHVSMQQTVQSTLPTTSMSMSGSGHGTGPGYSHSGPASQSVPMQGQGAISNYV
SRTNINMQSNPVSMMHQQAATSHYTSAQGGSQHYQGQSSMAMMGQGGQGSSMMGQRPMAP
YRPSQQGSAQQYLGQEEYYSEPYGHSQGASEPMSQQYYPEGHSDYAYQPSSYSEQSYERS
FEESTQHYYEGGNSQYSQQQAGYQQGTAQPQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGGYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgtccgcgcggccgagaggcaaaggagaggtcacgcagcaaacc
attcaaaagatgctggatgagaaccaccacctgatccagtgcatcctggactaccagagc
aagggcaagacggccgagtgcacacagtaccagcagatcctgcaccggaacctggtctac
ctggccaccatagccgactccaaccagaacatgcagtcgctgctgcccgccccgccgacc
cagaacatgaacctgggccccggagcactgagccagagcggttccagccagggcctgcac
ccacaaggcagcctcagtgacgccatcagcacgggcctgcccccggcctctctcatgcag
ggccagattggcaatggtcccagtcacgtgtccatgcagcagacggtgcagagcaccctg
cccacaacctccatgagcatgtccggcagtggccacggcacggggcctggctacagccac
tcgggacccgcctcacagagtgtccccatgcagggccagggtgccatcagcaactacgtg
tctcggaccaacatcaacatgcaatccaacccagtctccatgatgcaccagcaggcggcc
acgtcccactacacctcagcgcagggcgggagccagcactaccagggccagtcgtccatg
gccatgatgggccagggcggccagggcagcagcatgatggggcagcggcccatggcgcct
taccggccctcgcagcaaggctctgcgcagcagtacctgggccaggaggagtactacagc
gagccgtatggccacagccagggcgcctcggagcccatgagccagcagtactaccccgag
ggccacagcgactatgcctaccagccgtcgtcctactctgagcagagctatgagcgctcg
ttcgaggagtccacgcagcactactacgagggcgggaactcgcagtacagccagcagcag
gccgggtaccaacagggcactgcccagccacagacctactcccagcagcagtaccccaac
cagcagagctaccccgggcagcagcagggctatgggcctgcccagggcgccccctcgcag
tactccagctaccagcagggacaaggccagcagtacgggggctacagagcgtcgcagaca
ggaccctccgcccagcagcagcggccttatggctatgagcagggccagtatgggaattac
cagcagtga
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